ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CPW:0271:0355

Extra

PDB:
ATOM 1 O3' C A 270 64.442 100.733 -13.199 1.00138.46 O
ATOM 2 P U A 271 63.583 102.087 -13.370 1.00139.87 P
ATOM 3 OP1 U A 271 62.146 101.712 -13.292 1.00139.35 O
ATOM 4 OP2 U A 271 64.080 102.827 -14.561 1.00139.03 O
ATOM 5 O5' U A 271 63.955 102.917 -12.059 1.00140.00 O
ATOM 6 C5' U A 271 64.416 102.231 -10.874 1.00140.37 C
ATOM 7 C4' U A 271 65.498 103.024 -10.176 1.00140.30 C
ATOM 8 O4' U A 271 66.338 103.680 -11.160 1.00140.59 O
ATOM 9 C3' U A 271 65.003 104.138 -9.273 1.00140.29 C
ATOM 10 O3' U A 271 64.728 103.613 -7.975 1.00139.60 O
ATOM 11 C2' U A 271 66.189 105.101 -9.249 1.00140.68 C
ATOM 12 O2' U A 271 67.173 104.732 -8.301 1.00141.02 O
ATOM 13 C1' U A 271 66.768 104.930 -10.658 1.00140.72 C
ATOM 14 N1 U A 271 66.389 105.980 -11.620 1.00140.67 N
ATOM 15 C2 U A 271 67.409 106.715 -12.206 1.00140.64 C
ATOM 16 O2 U A 271 68.594 106.520 -11.972 1.00140.45 O
ATOM 17 N3 U A 271 66.992 107.691 -13.080 1.00140.77 N
ATOM 18 C4 U A 271 65.692 108.003 -13.423 1.00140.71 C
ATOM 19 O4 U A 271 65.477 108.948 -14.188 1.00140.31 O
ATOM 20 C5 U A 271 64.698 107.194 -12.787 1.00140.53 C
ATOM 21 C6 U A 271 65.068 106.235 -11.930 1.00140.42 C
ATOM 22 P C A 272 63.498 102.590 -7.762 1.00139.05 P
ATOM 23 OP1 C A 272 64.076 101.217 -7.780 1.00138.82 O
ATOM 24 OP2 C A 272 62.399 102.936 -8.701 1.00139.08 O
ATOM 25 O5' C A 272 62.984 102.893 -6.287 1.00137.80 O
TER

ATOM 1 O3' U B 354 73.043 111.958 -9.528 1.00108.28 O
ATOM 2 P G B 355 73.261 110.871 -10.701 1.00109.71 P
ATOM 3 OP1 G B 355 74.680 111.010 -11.132 1.00109.46 O
ATOM 4 OP2 G B 355 72.173 110.995 -11.704 1.00109.19 O
ATOM 5 O5' G B 355 73.114 109.460 -9.979 1.00109.36 O
ATOM 6 C5' G B 355 73.691 109.228 -8.677 1.00110.61 C
ATOM 7 C4' G B 355 72.784 108.332 -7.868 1.00111.08 C
ATOM 8 O4' G B 355 71.459 108.924 -7.886 1.00111.24 O
ATOM 9 C3' G B 355 72.629 106.907 -8.396 1.00111.71 C
ATOM 10 O3' G B 355 72.464 106.006 -7.303 1.00112.76 O
ATOM 11 C2' G B 355 71.343 106.969 -9.215 1.00111.26 C
ATOM 12 O2' G B 355 70.644 105.740 -9.259 1.00111.03 O
ATOM 13 C1' G B 355 70.536 108.025 -8.463 1.00110.68 C
ATOM 14 N9 G B 355 69.656 108.787 -9.344 1.00109.98 N
ATOM 15 C8 G B 355 70.011 109.494 -10.470 1.00109.76 C
ATOM 16 N7 G B 355 68.995 110.061 -11.060 1.00109.79 N
ATOM 17 C5 G B 355 67.904 109.710 -10.277 1.00109.35 C
ATOM 18 C6 G B 355 66.529 110.026 -10.422 1.00109.32 C
ATOM 19 O6 G B 355 65.982 110.700 -11.305 1.00109.15 O
ATOM 20 N1 G B 355 65.767 109.465 -9.399 1.00109.20 N
ATOM 21 C2 G B 355 66.263 108.702 -8.369 1.00108.66 C
ATOM 22 N2 G B 355 65.373 108.261 -7.471 1.00107.92 N
ATOM 23 N3 G B 355 67.540 108.397 -8.228 1.00108.64 N
ATOM 24 C4 G B 355 68.298 108.929 -9.210 1.00109.36 C
ATOM 25 P C B 356 73.199 104.573 -7.321 1.00113.08 P
ATOM 26 OP1 C B 356 74.536 104.740 -6.689 1.00112.84 O
ATOM 27 OP2 C B 356 73.097 103.997 -8.687 1.00112.54 O
ATOM 28 O5' C B 356 72.313 103.687 -6.342 1.00112.13 O
TER

Atoms:
C4: (65.692,108.003,-13.423)
N3: (66.992,107.691,-13.080)
OP1: (62.146,101.712,-13.292)
OP2: (64.080,102.827,-14.561)
C2: (67.409,106.715,-12.206)
C1': (66.768,104.930,-10.658)
C3': (65.003,104.138,-9.273)
O5': (63.955,102.917,-12.059)
O4': (66.338,103.680,-11.160)
C5': (64.416,102.231,-10.874)
P: (63.583,102.087,-13.370)
C4': (65.498,103.024,-10.176)
C2': (66.189,105.101,-9.249)
O2': (67.173,104.732,-8.301)
N1: (66.389,105.980,-11.620)
O4: (65.477,108.948,-14.188)
O2: (68.594,106.520,-11.972)
C6: (65.068,106.235,-11.930)
C5: (64.698,107.194,-12.787)
O3': (64.728,103.613,-7.975)
OP1: (74.680,111.010,-11.132)
OP2: (72.173,110.995,-11.704)
C3': (72.629,106.907,-8.396)
C1': (70.536,108.025,-8.463)
C5': (73.691,109.228,-8.677)
O6: (65.982,110.700,-11.305)
O4': (71.459,108.924,-7.886)
C8: (70.011,109.494,-10.470)
C2: (66.263,108.702,-8.369)
C6: (66.529,110.026,-10.422)
C5: (67.904,109.710,-10.277)
C4: (68.298,108.929,-9.210)
P: (73.261,110.871,-10.701)
C4': (72.784,108.332,-7.868)
C2': (71.343,106.969,-9.215)
O2': (70.644,105.740,-9.259)
N1: (65.767,109.465,-9.399)
N2: (65.373,108.261,-7.471)
N3: (67.540,108.397,-8.228)
N7: (68.995,110.061,-11.060)
N9: (69.656,108.787,-9.344)
O5': (73.114,109.460,-9.979)
O3': (72.464,106.006,-7.303)
Image (generated by PyMOL):
PyMOL image
show in jmol