Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0536:0592
Extra
PDB:
ATOM 1 O3' A A 535 5.993 139.186 92.043 1.00 56.89 O
ATOM 2 P U A 536 4.587 139.095 91.273 1.00 57.59 P
ATOM 3 OP1 U A 536 4.198 140.499 90.997 1.00 56.76 O
ATOM 4 OP2 U A 536 3.658 138.207 92.030 1.00 57.21 O
ATOM 5 O5' U A 536 4.940 138.384 89.892 1.00 56.74 O
ATOM 6 C5' U A 536 5.909 138.960 89.009 1.00 56.12 C
ATOM 7 C4' U A 536 6.080 138.103 87.780 1.00 57.19 C
ATOM 8 O4' U A 536 6.490 136.769 88.192 1.00 55.72 O
ATOM 9 C3' U A 536 4.851 137.917 86.892 1.00 58.20 C
ATOM 10 O3' U A 536 5.272 137.806 85.529 1.00 62.27 O
ATOM 11 C2' U A 536 4.324 136.565 87.350 1.00 57.18 C
ATOM 12 O2' U A 536 3.544 135.927 86.359 1.00 56.97 O
ATOM 13 C1' U A 536 5.636 135.820 87.598 1.00 55.80 C
ATOM 14 N1 U A 536 5.558 134.636 88.467 1.00 54.10 N
ATOM 15 C2 U A 536 5.861 133.402 87.905 1.00 53.44 C
ATOM 16 O2 U A 536 6.231 133.268 86.753 1.00 53.85 O
ATOM 17 N3 U A 536 5.716 132.330 88.745 1.00 53.34 N
ATOM 18 C4 U A 536 5.319 132.358 90.062 1.00 53.86 C
ATOM 19 O4 U A 536 5.166 131.298 90.670 1.00 54.34 O
ATOM 20 C5 U A 536 5.057 133.668 90.579 1.00 54.25 C
ATOM 21 C6 U A 536 5.184 134.735 89.785 1.00 53.88 C
ATOM 22 P A A 537 4.896 138.958 84.467 1.00 66.71 P
ATOM 23 OP1 A A 537 6.003 139.043 83.475 1.00 65.15 O
ATOM 24 OP2 A A 537 4.493 140.178 85.224 1.00 65.70 O
ATOM 25 O5' A A 537 3.607 138.403 83.710 1.00 66.09 O
TER
ATOM 1 O3' A B 591 -5.346 134.058 88.383 1.00 84.50 O
ATOM 2 P G B 592 -4.425 135.188 89.061 1.00 86.60 P
ATOM 3 OP1 G B 592 -5.199 135.878 90.135 1.00 86.01 O
ATOM 4 OP2 G B 592 -3.846 135.979 87.940 1.00 86.04 O
ATOM 5 O5' G B 592 -3.256 134.352 89.755 1.00 84.36 O
ATOM 6 C5' G B 592 -2.418 134.933 90.776 1.00 78.99 C
ATOM 7 C4' G B 592 -1.595 133.855 91.452 1.00 75.44 C
ATOM 8 O4' G B 592 -0.846 133.107 90.458 1.00 74.02 O
ATOM 9 C3' G B 592 -0.566 134.346 92.468 1.00 74.36 C
ATOM 10 O3' G B 592 -0.354 133.351 93.468 1.00 74.83 O
ATOM 11 C2' G B 592 0.706 134.416 91.634 1.00 72.91 C
ATOM 12 O2' G B 592 1.869 134.311 92.434 1.00 72.57 O
ATOM 13 C1' G B 592 0.535 133.180 90.752 1.00 71.76 C
ATOM 14 N9 G B 592 1.266 133.199 89.490 1.00 68.51 N
ATOM 15 C8 G B 592 1.558 134.291 88.711 1.00 67.75 C
ATOM 16 N7 G B 592 2.220 133.987 87.629 1.00 67.48 N
ATOM 17 C5 G B 592 2.376 132.609 87.696 1.00 67.42 C
ATOM 18 C6 G B 592 3.014 131.710 86.798 1.00 66.50 C
ATOM 19 O6 G B 592 3.591 131.962 85.735 1.00 65.84 O
ATOM 20 N1 G B 592 2.934 130.399 87.247 1.00 65.62 N
ATOM 21 C2 G B 592 2.326 129.999 88.408 1.00 67.04 C
ATOM 22 N2 G B 592 2.356 128.686 88.662 1.00 67.25 N
ATOM 23 N3 G B 592 1.731 130.825 89.257 1.00 67.33 N
ATOM 24 C4 G B 592 1.794 132.107 88.840 1.00 67.53 C
ATOM 25 P C B 593 -1.605 132.708 94.243 1.00 73.72 P
ATOM 26 OP1 C B 593 -2.725 133.685 94.231 1.00 73.02 O
ATOM 27 OP2 C B 593 -1.091 132.196 95.545 1.00 71.60 O
ATOM 28 O5' C B 593 -2.026 131.474 93.319 1.00 68.94 O
TER
ATOM 2 P U A 536 4.587 139.095 91.273 1.00 57.59 P
ATOM 3 OP1 U A 536 4.198 140.499 90.997 1.00 56.76 O
ATOM 4 OP2 U A 536 3.658 138.207 92.030 1.00 57.21 O
ATOM 5 O5' U A 536 4.940 138.384 89.892 1.00 56.74 O
ATOM 6 C5' U A 536 5.909 138.960 89.009 1.00 56.12 C
ATOM 7 C4' U A 536 6.080 138.103 87.780 1.00 57.19 C
ATOM 8 O4' U A 536 6.490 136.769 88.192 1.00 55.72 O
ATOM 9 C3' U A 536 4.851 137.917 86.892 1.00 58.20 C
ATOM 10 O3' U A 536 5.272 137.806 85.529 1.00 62.27 O
ATOM 11 C2' U A 536 4.324 136.565 87.350 1.00 57.18 C
ATOM 12 O2' U A 536 3.544 135.927 86.359 1.00 56.97 O
ATOM 13 C1' U A 536 5.636 135.820 87.598 1.00 55.80 C
ATOM 14 N1 U A 536 5.558 134.636 88.467 1.00 54.10 N
ATOM 15 C2 U A 536 5.861 133.402 87.905 1.00 53.44 C
ATOM 16 O2 U A 536 6.231 133.268 86.753 1.00 53.85 O
ATOM 17 N3 U A 536 5.716 132.330 88.745 1.00 53.34 N
ATOM 18 C4 U A 536 5.319 132.358 90.062 1.00 53.86 C
ATOM 19 O4 U A 536 5.166 131.298 90.670 1.00 54.34 O
ATOM 20 C5 U A 536 5.057 133.668 90.579 1.00 54.25 C
ATOM 21 C6 U A 536 5.184 134.735 89.785 1.00 53.88 C
ATOM 22 P A A 537 4.896 138.958 84.467 1.00 66.71 P
ATOM 23 OP1 A A 537 6.003 139.043 83.475 1.00 65.15 O
ATOM 24 OP2 A A 537 4.493 140.178 85.224 1.00 65.70 O
ATOM 25 O5' A A 537 3.607 138.403 83.710 1.00 66.09 O
TER
ATOM 1 O3' A B 591 -5.346 134.058 88.383 1.00 84.50 O
ATOM 2 P G B 592 -4.425 135.188 89.061 1.00 86.60 P
ATOM 3 OP1 G B 592 -5.199 135.878 90.135 1.00 86.01 O
ATOM 4 OP2 G B 592 -3.846 135.979 87.940 1.00 86.04 O
ATOM 5 O5' G B 592 -3.256 134.352 89.755 1.00 84.36 O
ATOM 6 C5' G B 592 -2.418 134.933 90.776 1.00 78.99 C
ATOM 7 C4' G B 592 -1.595 133.855 91.452 1.00 75.44 C
ATOM 8 O4' G B 592 -0.846 133.107 90.458 1.00 74.02 O
ATOM 9 C3' G B 592 -0.566 134.346 92.468 1.00 74.36 C
ATOM 10 O3' G B 592 -0.354 133.351 93.468 1.00 74.83 O
ATOM 11 C2' G B 592 0.706 134.416 91.634 1.00 72.91 C
ATOM 12 O2' G B 592 1.869 134.311 92.434 1.00 72.57 O
ATOM 13 C1' G B 592 0.535 133.180 90.752 1.00 71.76 C
ATOM 14 N9 G B 592 1.266 133.199 89.490 1.00 68.51 N
ATOM 15 C8 G B 592 1.558 134.291 88.711 1.00 67.75 C
ATOM 16 N7 G B 592 2.220 133.987 87.629 1.00 67.48 N
ATOM 17 C5 G B 592 2.376 132.609 87.696 1.00 67.42 C
ATOM 18 C6 G B 592 3.014 131.710 86.798 1.00 66.50 C
ATOM 19 O6 G B 592 3.591 131.962 85.735 1.00 65.84 O
ATOM 20 N1 G B 592 2.934 130.399 87.247 1.00 65.62 N
ATOM 21 C2 G B 592 2.326 129.999 88.408 1.00 67.04 C
ATOM 22 N2 G B 592 2.356 128.686 88.662 1.00 67.25 N
ATOM 23 N3 G B 592 1.731 130.825 89.257 1.00 67.33 N
ATOM 24 C4 G B 592 1.794 132.107 88.840 1.00 67.53 C
ATOM 25 P C B 593 -1.605 132.708 94.243 1.00 73.72 P
ATOM 26 OP1 C B 593 -2.725 133.685 94.231 1.00 73.02 O
ATOM 27 OP2 C B 593 -1.091 132.196 95.545 1.00 71.60 O
ATOM 28 O5' C B 593 -2.026 131.474 93.319 1.00 68.94 O
TER
Atoms:
C4: (5.319,132.358,90.062)
N3: (5.716,132.330,88.745)
OP1: (4.198,140.499,90.997)
OP2: (3.658,138.207,92.030)
C2: (5.861,133.402,87.905)
C1': (5.636,135.820,87.598)
C3': (4.851,137.917,86.892)
O5': (4.940,138.384,89.892)
O4': (6.490,136.769,88.192)
C5': (5.909,138.960,89.009)
P: (4.587,139.095,91.273)
C4': (6.080,138.103,87.780)
C2': (4.324,136.565,87.350)
O2': (3.544,135.927,86.359)
N1: (5.558,134.636,88.467)
O4: (5.166,131.298,90.670)
O2: (6.231,133.268,86.753)
C6: (5.184,134.735,89.785)
C5: (5.057,133.668,90.579)
O3': (5.272,137.806,85.529)
N3: (5.716,132.330,88.745)
OP1: (4.198,140.499,90.997)
OP2: (3.658,138.207,92.030)
C2: (5.861,133.402,87.905)
C1': (5.636,135.820,87.598)
C3': (4.851,137.917,86.892)
O5': (4.940,138.384,89.892)
O4': (6.490,136.769,88.192)
C5': (5.909,138.960,89.009)
P: (4.587,139.095,91.273)
C4': (6.080,138.103,87.780)
C2': (4.324,136.565,87.350)
O2': (3.544,135.927,86.359)
N1: (5.558,134.636,88.467)
O4: (5.166,131.298,90.670)
O2: (6.231,133.268,86.753)
C6: (5.184,134.735,89.785)
C5: (5.057,133.668,90.579)
O3': (5.272,137.806,85.529)
OP1: (-5.199,135.878,90.135)
OP2: (-3.846,135.979,87.940)
C3': (-0.566,134.346,92.468)
C1': (0.535,133.180,90.752)
C5': (-2.418,134.933,90.776)
O6: (3.591,131.962,85.735)
O4': (-0.846,133.107,90.458)
C8: (1.558,134.291,88.711)
C2: (2.326,129.999,88.408)
C6: (3.014,131.710,86.798)
C5: (2.376,132.609,87.696)
C4: (1.794,132.107,88.840)
P: (-4.425,135.188,89.061)
C4': (-1.595,133.855,91.452)
C2': (0.706,134.416,91.634)
O2': (1.869,134.311,92.434)
N1: (2.934,130.399,87.247)
N2: (2.356,128.686,88.662)
N3: (1.731,130.825,89.257)
N7: (2.220,133.987,87.629)
N9: (1.266,133.199,89.490)
O5': (-3.256,134.352,89.755)
O3': (-0.354,133.351,93.468)
OP2: (-3.846,135.979,87.940)
C3': (-0.566,134.346,92.468)
C1': (0.535,133.180,90.752)
C5': (-2.418,134.933,90.776)
O6: (3.591,131.962,85.735)
O4': (-0.846,133.107,90.458)
C8: (1.558,134.291,88.711)
C2: (2.326,129.999,88.408)
C6: (3.014,131.710,86.798)
C5: (2.376,132.609,87.696)
C4: (1.794,132.107,88.840)
P: (-4.425,135.188,89.061)
C4': (-1.595,133.855,91.452)
C2': (0.706,134.416,91.634)
O2': (1.869,134.311,92.434)
N1: (2.934,130.399,87.247)
N2: (2.356,128.686,88.662)
N3: (1.731,130.825,89.257)
N7: (2.220,133.987,87.629)
N9: (1.266,133.199,89.490)
O5': (-3.256,134.352,89.755)
O3': (-0.354,133.351,93.468)
Image (generated by PyMOL):