ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:52227:52719

Extra

PDB:
ATOM 1 O3' C A2226 165.806 -10.550 214.026 1.00 35.20 O
ATOM 2 P U A2227 166.404 -11.977 213.572 1.00 39.38 P
ATOM 3 OP1 U A2227 167.422 -11.669 212.646 1.00 39.64 O
ATOM 4 OP2 U A2227 165.295 -12.826 213.097 1.00 39.52 O
ATOM 5 O5' U A2227 167.026 -12.595 214.921 1.00 39.19 O
ATOM 6 C5' U A2227 167.778 -11.795 215.818 1.00 38.96 C
ATOM 7 C4' U A2227 168.155 -12.525 217.081 1.00 38.80 C
ATOM 8 O4' U A2227 166.998 -12.666 217.930 1.00 38.55 O
ATOM 9 C3' U A2227 168.664 -13.928 216.908 1.00 39.06 C
ATOM 10 O3' U A2227 170.040 -13.969 216.602 1.00 39.24 O
ATOM 11 C2' U A2227 168.338 -14.574 218.242 1.00 38.83 C
ATOM 12 O2' U A2227 169.295 -14.178 219.213 1.00 38.66 O
ATOM 13 C1' U A2227 167.019 -13.915 218.587 1.00 38.58 C
ATOM 14 N1 U A2227 165.800 -14.734 218.155 1.00 38.68 N
ATOM 15 C2 U A2227 165.372 -15.840 218.895 1.00 38.65 C
ATOM 16 O2 U A2227 165.945 -16.264 219.845 1.00 38.56 O
ATOM 17 N3 U A2227 164.245 -16.485 218.487 1.00 38.76 N
ATOM 18 C4 U A2227 163.448 -16.141 217.427 1.00 38.88 C
ATOM 19 O4 U A2227 162.462 -16.846 217.208 1.00 38.97 O
ATOM 20 C5 U A2227 163.871 -15.002 216.683 1.00 38.91 C
ATOM 21 C6 U A2227 164.975 -14.361 217.083 1.00 38.80 C
ATOM 22 P U A2228 170.640 -15.209 215.791 1.00 38.26 P
ATOM 23 OP1 U A2228 172.076 -14.923 215.564 1.00 38.40 O
ATOM 24 OP2 U A2228 169.781 -15.423 214.620 1.00 38.47 O
ATOM 25 O5' U A2228 170.494 -16.420 216.829 1.00 38.19 O
TER

ATOM 1 O3' U B2718 176.994 -13.615 222.790 1.00 42.28 O
ATOM 2 P G B2719 176.414 -12.223 223.277 1.00 41.22 P
ATOM 3 OP1 G B2719 177.446 -11.201 223.043 1.00 41.26 O
ATOM 4 OP2 G B2719 175.926 -12.416 224.634 1.00 40.95 O
ATOM 5 O5' G B2719 175.208 -11.965 222.303 1.00 41.23 O
ATOM 6 C5' G B2719 175.366 -12.032 220.907 1.00 41.52 C
ATOM 7 C4' G B2719 174.070 -12.362 220.272 1.00 41.55 C
ATOM 8 O4' G B2719 173.585 -13.596 220.818 1.00 41.54 O
ATOM 9 C3' G B2719 172.948 -11.376 220.527 1.00 41.26 C
ATOM 10 O3' G B2719 173.001 -10.288 219.622 1.00 41.32 O
ATOM 11 C2' G B2719 171.704 -12.244 220.348 1.00 41.28 C
ATOM 12 O2' G B2719 171.409 -12.411 218.964 1.00 41.55 O
ATOM 13 C1' G B2719 172.184 -13.588 220.867 1.00 41.39 C
ATOM 14 N9 G B2719 171.763 -13.889 222.248 1.00 41.13 N
ATOM 15 C8 G B2719 172.442 -13.559 223.391 1.00 40.95 C
ATOM 16 N7 G B2719 171.895 -14.006 224.481 1.00 40.76 N
ATOM 17 C5 G B2719 170.795 -14.708 224.026 1.00 40.83 C
ATOM 18 C6 G B2719 169.836 -15.429 224.742 1.00 40.72 C
ATOM 19 O6 G B2719 169.768 -15.583 225.930 1.00 40.53 O
ATOM 20 N1 G B2719 168.855 -15.987 223.965 1.00 40.85 N
ATOM 21 C2 G B2719 168.824 -15.882 222.625 1.00 41.07 C
ATOM 22 N2 G B2719 167.800 -16.531 222.096 1.00 41.18 N
ATOM 23 N3 G B2719 169.714 -15.240 221.902 1.00 41.19 N
ATOM 24 C4 G B2719 170.682 -14.671 222.657 1.00 41.06 C
ATOM 25 P A B2720 172.700 -8.786 220.078 1.00 37.66 P
ATOM 26 OP1 A B2720 173.449 -7.905 219.150 1.00 37.83 O
ATOM 27 OP2 A B2720 172.978 -8.693 221.501 1.00 37.41 O
ATOM 28 O5' A B2720 171.136 -8.654 219.832 1.00 37.55 O
TER

Atoms:
C4: (163.448,-16.141,217.427)
N3: (164.245,-16.485,218.487)
OP1: (167.422,-11.669,212.646)
OP2: (165.295,-12.826,213.097)
C2: (165.372,-15.840,218.895)
C1': (167.019,-13.915,218.587)
C3': (168.664,-13.928,216.908)
O5': (167.026,-12.595,214.921)
O4': (166.998,-12.666,217.930)
C5': (167.778,-11.795,215.818)
P: (166.404,-11.977,213.572)
C4': (168.155,-12.525,217.081)
C2': (168.338,-14.574,218.242)
O2': (169.295,-14.178,219.213)
N1: (165.800,-14.734,218.155)
O4: (162.462,-16.846,217.208)
O2: (165.945,-16.264,219.845)
C6: (164.975,-14.361,217.083)
C5: (163.871,-15.002,216.683)
O3': (170.040,-13.969,216.602)
OP1: (177.446,-11.201,223.043)
OP2: (175.926,-12.416,224.634)
C3': (172.948,-11.376,220.527)
C1': (172.184,-13.588,220.867)
C5': (175.366,-12.032,220.907)
O6: (169.768,-15.583,225.930)
O4': (173.585,-13.596,220.818)
C8: (172.442,-13.559,223.391)
C2: (168.824,-15.882,222.625)
C6: (169.836,-15.429,224.742)
C5: (170.795,-14.708,224.026)
C4: (170.682,-14.671,222.657)
P: (176.414,-12.223,223.277)
C4': (174.070,-12.362,220.272)
C2': (171.704,-12.244,220.348)
O2': (171.409,-12.411,218.964)
N1: (168.855,-15.987,223.965)
N2: (167.800,-16.531,222.096)
N3: (169.714,-15.240,221.902)
N7: (171.895,-14.006,224.481)
N9: (171.763,-13.889,222.248)
O5': (175.208,-11.965,222.303)
O3': (173.001,-10.288,219.622)
Image (generated by PyMOL):
PyMOL image
show in jmol