Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5P:E59:E20
Extra
PDB:
ATOM 1 O3' A A 58 2.989 12.747 122.356 1.00 78.80 O
ATOM 2 P U A 59 1.548 12.802 123.056 1.00 78.26 P
ATOM 3 OP1 U A 59 1.808 13.235 124.447 1.00 78.29 O
ATOM 4 OP2 U A 59 0.813 11.529 122.801 1.00 70.82 O
ATOM 5 O5' U A 59 0.803 14.053 122.413 1.00 73.02 O
ATOM 6 C5' U A 59 0.874 15.301 123.108 1.00 84.83 C
ATOM 7 C4' U A 59 0.190 16.425 122.353 1.00 74.26 C
ATOM 8 O4' U A 59 0.232 16.208 120.922 1.00 80.06 O
ATOM 9 C3' U A 59 -1.288 16.475 122.689 1.00 84.51 C
ATOM 10 O3' U A 59 -1.710 17.743 123.167 1.00 92.47 O
ATOM 11 C2' U A 59 -2.035 15.779 121.548 1.00 80.41 C
ATOM 12 O2' U A 59 -3.258 16.421 121.263 1.00124.22 O
ATOM 13 C1' U A 59 -1.066 15.995 120.399 1.00 83.54 C
ATOM 14 N1 U A 59 -1.060 14.958 119.364 1.00 85.70 N
ATOM 15 C2 U A 59 -1.803 15.215 118.203 1.00 86.22 C
ATOM 16 O2 U A 59 -2.354 16.274 117.993 1.00 92.97 O
ATOM 17 N3 U A 59 -1.869 14.173 117.312 1.00 80.86 N
ATOM 18 C4 U A 59 -1.278 12.951 117.443 1.00 80.61 C
ATOM 19 O4 U A 59 -1.447 12.100 116.576 1.00 76.48 O
ATOM 20 C5 U A 59 -0.491 12.778 118.649 1.00 86.78 C
ATOM 21 C6 U A 59 -0.407 13.771 119.542 1.00 87.49 C
ATOM 22 P U A 60 -3.204 17.921 123.731 1.00 89.24 P
ATOM 23 OP1 U A 60 -3.180 18.860 124.857 1.00102.84 O
ATOM 24 OP2 U A 60 -3.792 16.592 123.930 1.00 86.44 O
ATOM 25 O5' U A 60 -3.979 18.606 122.521 1.00 97.60 O
TER
ATOM 1 O3' A B 19 -4.696 3.822 118.467 1.00 95.50 O
ATOM 2 P G B 20 -3.446 4.402 117.652 1.00 92.22 P
ATOM 3 OP1 G B 20 -3.121 3.482 116.533 1.00 87.90 O
ATOM 4 OP2 G B 20 -2.414 4.710 118.674 1.00 91.06 O
ATOM 5 O5' G B 20 -4.013 5.758 117.039 1.00 88.28 O
ATOM 6 C5' G B 20 -5.149 5.743 116.182 1.00 80.79 C
ATOM 7 C4' G B 20 -5.513 7.149 115.772 1.00 84.70 C
ATOM 8 O4' G B 20 -6.034 7.885 116.909 1.00 82.64 O
ATOM 9 C3' G B 20 -4.350 7.986 115.281 1.00 85.45 C
ATOM 10 O3' G B 20 -4.092 7.713 113.914 1.00 82.51 O
ATOM 11 C2' G B 20 -4.858 9.402 115.520 1.00 93.38 C
ATOM 12 O2' G B 20 -5.776 9.828 114.529 1.00 85.26 O
ATOM 13 C1' G B 20 -5.589 9.231 116.854 1.00 87.57 C
ATOM 14 N9 G B 20 -4.751 9.463 118.028 1.00 85.55 N
ATOM 15 C8 G B 20 -4.040 8.509 118.712 1.00 89.80 C
ATOM 16 N7 G B 20 -3.385 8.991 119.733 1.00 87.26 N
ATOM 17 C5 G B 20 -3.678 10.346 119.724 1.00 83.80 C
ATOM 18 C6 G B 20 -3.247 11.376 120.591 1.00 83.69 C
ATOM 19 O6 G B 20 -2.495 11.289 121.570 1.00 87.83 O
ATOM 20 N1 G B 20 -3.780 12.609 120.227 1.00 81.16 N
ATOM 21 C2 G B 20 -4.618 12.821 119.161 1.00 79.74 C
ATOM 22 N2 G B 20 -5.019 14.087 118.975 1.00 75.45 N
ATOM 23 N3 G B 20 -5.028 11.864 118.340 1.00 80.70 N
ATOM 24 C4 G B 20 -4.521 10.659 118.678 1.00 82.85 C
ATOM 25 P A B 21 -2.580 7.708 113.381 1.00 80.62 P
ATOM 26 OP1 A B 21 -2.590 7.305 111.954 1.00104.64 O
ATOM 27 OP2 A B 21 -1.767 6.939 114.353 1.00 87.29 O
ATOM 28 O5' A B 21 -2.166 9.238 113.479 1.00 89.41 O
TER
ATOM 2 P U A 59 1.548 12.802 123.056 1.00 78.26 P
ATOM 3 OP1 U A 59 1.808 13.235 124.447 1.00 78.29 O
ATOM 4 OP2 U A 59 0.813 11.529 122.801 1.00 70.82 O
ATOM 5 O5' U A 59 0.803 14.053 122.413 1.00 73.02 O
ATOM 6 C5' U A 59 0.874 15.301 123.108 1.00 84.83 C
ATOM 7 C4' U A 59 0.190 16.425 122.353 1.00 74.26 C
ATOM 8 O4' U A 59 0.232 16.208 120.922 1.00 80.06 O
ATOM 9 C3' U A 59 -1.288 16.475 122.689 1.00 84.51 C
ATOM 10 O3' U A 59 -1.710 17.743 123.167 1.00 92.47 O
ATOM 11 C2' U A 59 -2.035 15.779 121.548 1.00 80.41 C
ATOM 12 O2' U A 59 -3.258 16.421 121.263 1.00124.22 O
ATOM 13 C1' U A 59 -1.066 15.995 120.399 1.00 83.54 C
ATOM 14 N1 U A 59 -1.060 14.958 119.364 1.00 85.70 N
ATOM 15 C2 U A 59 -1.803 15.215 118.203 1.00 86.22 C
ATOM 16 O2 U A 59 -2.354 16.274 117.993 1.00 92.97 O
ATOM 17 N3 U A 59 -1.869 14.173 117.312 1.00 80.86 N
ATOM 18 C4 U A 59 -1.278 12.951 117.443 1.00 80.61 C
ATOM 19 O4 U A 59 -1.447 12.100 116.576 1.00 76.48 O
ATOM 20 C5 U A 59 -0.491 12.778 118.649 1.00 86.78 C
ATOM 21 C6 U A 59 -0.407 13.771 119.542 1.00 87.49 C
ATOM 22 P U A 60 -3.204 17.921 123.731 1.00 89.24 P
ATOM 23 OP1 U A 60 -3.180 18.860 124.857 1.00102.84 O
ATOM 24 OP2 U A 60 -3.792 16.592 123.930 1.00 86.44 O
ATOM 25 O5' U A 60 -3.979 18.606 122.521 1.00 97.60 O
TER
ATOM 1 O3' A B 19 -4.696 3.822 118.467 1.00 95.50 O
ATOM 2 P G B 20 -3.446 4.402 117.652 1.00 92.22 P
ATOM 3 OP1 G B 20 -3.121 3.482 116.533 1.00 87.90 O
ATOM 4 OP2 G B 20 -2.414 4.710 118.674 1.00 91.06 O
ATOM 5 O5' G B 20 -4.013 5.758 117.039 1.00 88.28 O
ATOM 6 C5' G B 20 -5.149 5.743 116.182 1.00 80.79 C
ATOM 7 C4' G B 20 -5.513 7.149 115.772 1.00 84.70 C
ATOM 8 O4' G B 20 -6.034 7.885 116.909 1.00 82.64 O
ATOM 9 C3' G B 20 -4.350 7.986 115.281 1.00 85.45 C
ATOM 10 O3' G B 20 -4.092 7.713 113.914 1.00 82.51 O
ATOM 11 C2' G B 20 -4.858 9.402 115.520 1.00 93.38 C
ATOM 12 O2' G B 20 -5.776 9.828 114.529 1.00 85.26 O
ATOM 13 C1' G B 20 -5.589 9.231 116.854 1.00 87.57 C
ATOM 14 N9 G B 20 -4.751 9.463 118.028 1.00 85.55 N
ATOM 15 C8 G B 20 -4.040 8.509 118.712 1.00 89.80 C
ATOM 16 N7 G B 20 -3.385 8.991 119.733 1.00 87.26 N
ATOM 17 C5 G B 20 -3.678 10.346 119.724 1.00 83.80 C
ATOM 18 C6 G B 20 -3.247 11.376 120.591 1.00 83.69 C
ATOM 19 O6 G B 20 -2.495 11.289 121.570 1.00 87.83 O
ATOM 20 N1 G B 20 -3.780 12.609 120.227 1.00 81.16 N
ATOM 21 C2 G B 20 -4.618 12.821 119.161 1.00 79.74 C
ATOM 22 N2 G B 20 -5.019 14.087 118.975 1.00 75.45 N
ATOM 23 N3 G B 20 -5.028 11.864 118.340 1.00 80.70 N
ATOM 24 C4 G B 20 -4.521 10.659 118.678 1.00 82.85 C
ATOM 25 P A B 21 -2.580 7.708 113.381 1.00 80.62 P
ATOM 26 OP1 A B 21 -2.590 7.305 111.954 1.00104.64 O
ATOM 27 OP2 A B 21 -1.767 6.939 114.353 1.00 87.29 O
ATOM 28 O5' A B 21 -2.166 9.238 113.479 1.00 89.41 O
TER
Atoms:
C4: (-1.278,12.951,117.443)
N3: (-1.869,14.173,117.312)
OP1: (1.808,13.235,124.447)
OP2: (0.813,11.529,122.801)
C2: (-1.803,15.215,118.203)
C1': (-1.066,15.995,120.399)
C3': (-1.288,16.475,122.689)
O5': (0.803,14.053,122.413)
O4': (0.232,16.208,120.922)
C5': (0.874,15.301,123.108)
P: (1.548,12.802,123.056)
C4': (0.190,16.425,122.353)
C2': (-2.035,15.779,121.548)
O2': (-3.258,16.421,121.263)
N1: (-1.060,14.958,119.364)
O4: (-1.447,12.100,116.576)
O2: (-2.354,16.274,117.993)
C6: (-0.407,13.771,119.542)
C5: (-0.491,12.778,118.649)
O3': (-1.710,17.743,123.167)
N3: (-1.869,14.173,117.312)
OP1: (1.808,13.235,124.447)
OP2: (0.813,11.529,122.801)
C2: (-1.803,15.215,118.203)
C1': (-1.066,15.995,120.399)
C3': (-1.288,16.475,122.689)
O5': (0.803,14.053,122.413)
O4': (0.232,16.208,120.922)
C5': (0.874,15.301,123.108)
P: (1.548,12.802,123.056)
C4': (0.190,16.425,122.353)
C2': (-2.035,15.779,121.548)
O2': (-3.258,16.421,121.263)
N1: (-1.060,14.958,119.364)
O4: (-1.447,12.100,116.576)
O2: (-2.354,16.274,117.993)
C6: (-0.407,13.771,119.542)
C5: (-0.491,12.778,118.649)
O3': (-1.710,17.743,123.167)
OP1: (-3.121,3.482,116.533)
OP2: (-2.414,4.710,118.674)
C3': (-4.350,7.986,115.281)
C1': (-5.589,9.231,116.854)
C5': (-5.149,5.743,116.182)
O6: (-2.495,11.289,121.570)
O4': (-6.034,7.885,116.909)
C8: (-4.040,8.509,118.712)
C2: (-4.618,12.821,119.161)
C6: (-3.247,11.376,120.591)
C5: (-3.678,10.346,119.724)
C4: (-4.521,10.659,118.678)
P: (-3.446,4.402,117.652)
C4': (-5.513,7.149,115.772)
C2': (-4.858,9.402,115.520)
O2': (-5.776,9.828,114.529)
N1: (-3.780,12.609,120.227)
N2: (-5.019,14.087,118.975)
N3: (-5.028,11.864,118.340)
N7: (-3.385,8.991,119.733)
N9: (-4.751,9.463,118.028)
O5': (-4.013,5.758,117.039)
O3': (-4.092,7.713,113.914)
OP2: (-2.414,4.710,118.674)
C3': (-4.350,7.986,115.281)
C1': (-5.589,9.231,116.854)
C5': (-5.149,5.743,116.182)
O6: (-2.495,11.289,121.570)
O4': (-6.034,7.885,116.909)
C8: (-4.040,8.509,118.712)
C2: (-4.618,12.821,119.161)
C6: (-3.247,11.376,120.591)
C5: (-3.678,10.346,119.724)
C4: (-4.521,10.659,118.678)
P: (-3.446,4.402,117.652)
C4': (-5.513,7.149,115.772)
C2': (-4.858,9.402,115.520)
O2': (-5.776,9.828,114.529)
N1: (-3.780,12.609,120.227)
N2: (-5.019,14.087,118.975)
N3: (-5.028,11.864,118.340)
N7: (-3.385,8.991,119.733)
N9: (-4.751,9.463,118.028)
O5': (-4.013,5.758,117.039)
O3': (-4.092,7.713,113.914)
Image (generated by PyMOL):