Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1J8G:C5:C4
Extra
PDB:
ATOM 1 O3' G A 4 9.254 14.204 9.409 1.00 5.04 O
ATOM 2 P U A 5 8.920 14.801 7.956 1.00 6.28 P
ATOM 3 OP1 U A 5 7.530 14.593 7.654 1.00 8.59 O
ATOM 4 OP2 U A 5 9.929 14.293 7.040 1.00 8.74 O
ATOM 5 O5' U A 5 9.187 16.318 8.225 1.00 7.53 O
ATOM 6 C5' U A 5 9.332 17.212 7.080 1.00 7.11 C
ATOM 7 C4' U A 5 8.785 18.572 7.386 1.00 6.32 C
ATOM 8 O4' U A 5 7.336 18.530 7.440 1.00 6.49 O
ATOM 9 C3' U A 5 9.233 19.129 8.739 1.00 5.90 C
ATOM 10 O3' U A 5 9.416 20.547 8.670 1.00 7.18 O
ATOM 11 C2' U A 5 8.008 18.898 9.641 1.00 4.84 C
ATOM 12 O2' U A 5 7.887 19.780 10.699 1.00 5.04 O
ATOM 13 C1' U A 5 6.881 19.109 8.623 1.00 5.14 C
ATOM 14 N1 U A 5 5.625 18.486 9.010 1.00 5.06 N
ATOM 15 C2 U A 5 4.548 19.302 9.304 1.00 5.61 C
ATOM 16 O2 U A 5 4.582 20.511 9.216 1.00 7.66 O
ATOM 17 N3 U A 5 3.430 18.609 9.700 1.00 5.52 N
ATOM 18 C4 U A 5 3.228 17.279 9.788 1.00 4.85 C
ATOM 19 O4 U A 5 2.151 16.852 10.171 1.00 5.51 O
ATOM 20 C5 U A 5 4.388 16.465 9.411 1.00 4.75 C
ATOM 21 C6 U A 5 5.509 17.113 9.050 1.00 4.92 C
TER
ATOM 1 O3' G B 3 10.622 17.586 14.251 1.00 2.93 O
ATOM 2 P G B 4 10.444 17.752 12.675 1.00 3.32 P
ATOM 3 OP1 G B 4 11.836 17.667 12.125 1.00 4.22 O
ATOM 4 OP2 G B 4 9.606 18.937 12.387 1.00 4.24 O
ATOM 5 O5' G B 4 9.584 16.493 12.217 1.00 3.70 O
ATOM 6 C5' G B 4 10.183 15.183 12.252 1.00 4.21 C
ATOM 7 C4' G B 4 9.163 14.175 11.829 1.00 3.93 C
ATOM 8 O4' G B 4 8.117 14.128 12.813 1.00 3.97 O
ATOM 9 C3' G B 4 8.421 14.506 10.517 1.00 3.92 C
ATOM 10 O3' G B 4 9.254 14.204 9.409 1.00 5.04 O
ATOM 11 C2' G B 4 7.184 13.637 10.682 1.00 4.19 C
ATOM 12 O2' G B 4 7.552 12.282 10.438 1.00 5.61 O
ATOM 13 C1' G B 4 6.885 13.807 12.181 1.00 3.84 C
ATOM 14 N9 G B 4 5.953 14.916 12.456 1.00 3.57 N
ATOM 15 C8 G B 4 6.233 16.260 12.608 1.00 3.34 C
ATOM 16 N7 G B 4 5.175 16.975 12.886 1.00 3.18 N
ATOM 17 C5 G B 4 4.145 16.055 12.906 1.00 3.04 C
ATOM 18 C6 G B 4 2.756 16.242 13.159 1.00 2.87 C
ATOM 19 O6 G B 4 2.180 17.306 13.437 1.00 2.99 O
ATOM 20 N1 G B 4 2.052 15.040 13.097 1.00 2.97 N
ATOM 21 C2 G B 4 2.608 13.816 12.813 1.00 3.52 C
ATOM 22 N2 G B 4 1.792 12.761 12.765 1.00 4.69 N
ATOM 23 N3 G B 4 3.908 13.633 12.591 1.00 3.64 N
ATOM 24 C4 G B 4 4.606 14.775 12.654 1.00 3.30 C
ATOM 25 P U B 5 8.920 14.801 7.956 1.00 6.28 P
ATOM 26 OP1 U B 5 7.530 14.593 7.654 1.00 8.59 O
ATOM 27 OP2 U B 5 9.929 14.293 7.040 1.00 8.74 O
ATOM 28 O5' U B 5 9.187 16.318 8.225 1.00 7.53 O
TER
ATOM 2 P U A 5 8.920 14.801 7.956 1.00 6.28 P
ATOM 3 OP1 U A 5 7.530 14.593 7.654 1.00 8.59 O
ATOM 4 OP2 U A 5 9.929 14.293 7.040 1.00 8.74 O
ATOM 5 O5' U A 5 9.187 16.318 8.225 1.00 7.53 O
ATOM 6 C5' U A 5 9.332 17.212 7.080 1.00 7.11 C
ATOM 7 C4' U A 5 8.785 18.572 7.386 1.00 6.32 C
ATOM 8 O4' U A 5 7.336 18.530 7.440 1.00 6.49 O
ATOM 9 C3' U A 5 9.233 19.129 8.739 1.00 5.90 C
ATOM 10 O3' U A 5 9.416 20.547 8.670 1.00 7.18 O
ATOM 11 C2' U A 5 8.008 18.898 9.641 1.00 4.84 C
ATOM 12 O2' U A 5 7.887 19.780 10.699 1.00 5.04 O
ATOM 13 C1' U A 5 6.881 19.109 8.623 1.00 5.14 C
ATOM 14 N1 U A 5 5.625 18.486 9.010 1.00 5.06 N
ATOM 15 C2 U A 5 4.548 19.302 9.304 1.00 5.61 C
ATOM 16 O2 U A 5 4.582 20.511 9.216 1.00 7.66 O
ATOM 17 N3 U A 5 3.430 18.609 9.700 1.00 5.52 N
ATOM 18 C4 U A 5 3.228 17.279 9.788 1.00 4.85 C
ATOM 19 O4 U A 5 2.151 16.852 10.171 1.00 5.51 O
ATOM 20 C5 U A 5 4.388 16.465 9.411 1.00 4.75 C
ATOM 21 C6 U A 5 5.509 17.113 9.050 1.00 4.92 C
TER
ATOM 1 O3' G B 3 10.622 17.586 14.251 1.00 2.93 O
ATOM 2 P G B 4 10.444 17.752 12.675 1.00 3.32 P
ATOM 3 OP1 G B 4 11.836 17.667 12.125 1.00 4.22 O
ATOM 4 OP2 G B 4 9.606 18.937 12.387 1.00 4.24 O
ATOM 5 O5' G B 4 9.584 16.493 12.217 1.00 3.70 O
ATOM 6 C5' G B 4 10.183 15.183 12.252 1.00 4.21 C
ATOM 7 C4' G B 4 9.163 14.175 11.829 1.00 3.93 C
ATOM 8 O4' G B 4 8.117 14.128 12.813 1.00 3.97 O
ATOM 9 C3' G B 4 8.421 14.506 10.517 1.00 3.92 C
ATOM 10 O3' G B 4 9.254 14.204 9.409 1.00 5.04 O
ATOM 11 C2' G B 4 7.184 13.637 10.682 1.00 4.19 C
ATOM 12 O2' G B 4 7.552 12.282 10.438 1.00 5.61 O
ATOM 13 C1' G B 4 6.885 13.807 12.181 1.00 3.84 C
ATOM 14 N9 G B 4 5.953 14.916 12.456 1.00 3.57 N
ATOM 15 C8 G B 4 6.233 16.260 12.608 1.00 3.34 C
ATOM 16 N7 G B 4 5.175 16.975 12.886 1.00 3.18 N
ATOM 17 C5 G B 4 4.145 16.055 12.906 1.00 3.04 C
ATOM 18 C6 G B 4 2.756 16.242 13.159 1.00 2.87 C
ATOM 19 O6 G B 4 2.180 17.306 13.437 1.00 2.99 O
ATOM 20 N1 G B 4 2.052 15.040 13.097 1.00 2.97 N
ATOM 21 C2 G B 4 2.608 13.816 12.813 1.00 3.52 C
ATOM 22 N2 G B 4 1.792 12.761 12.765 1.00 4.69 N
ATOM 23 N3 G B 4 3.908 13.633 12.591 1.00 3.64 N
ATOM 24 C4 G B 4 4.606 14.775 12.654 1.00 3.30 C
ATOM 25 P U B 5 8.920 14.801 7.956 1.00 6.28 P
ATOM 26 OP1 U B 5 7.530 14.593 7.654 1.00 8.59 O
ATOM 27 OP2 U B 5 9.929 14.293 7.040 1.00 8.74 O
ATOM 28 O5' U B 5 9.187 16.318 8.225 1.00 7.53 O
TER
Atoms:
C4: (3.228,17.279,9.788)
N3: (3.430,18.609,9.700)
OP1: (7.530,14.593,7.654)
OP2: (9.929,14.293,7.040)
C2: (4.548,19.302,9.304)
C1': (6.881,19.109,8.623)
C3': (9.233,19.129,8.739)
O5': (9.187,16.318,8.225)
O4': (7.336,18.530,7.440)
C5': (9.332,17.212,7.080)
P: (8.920,14.801,7.956)
C4': (8.785,18.572,7.386)
C2': (8.008,18.898,9.641)
O2': (7.887,19.780,10.699)
N1: (5.625,18.486,9.010)
O4: (2.151,16.852,10.171)
O2: (4.582,20.511,9.216)
C6: (5.509,17.113,9.050)
C5: (4.388,16.465,9.411)
O3': (9.416,20.547,8.670)
N3: (3.430,18.609,9.700)
OP1: (7.530,14.593,7.654)
OP2: (9.929,14.293,7.040)
C2: (4.548,19.302,9.304)
C1': (6.881,19.109,8.623)
C3': (9.233,19.129,8.739)
O5': (9.187,16.318,8.225)
O4': (7.336,18.530,7.440)
C5': (9.332,17.212,7.080)
P: (8.920,14.801,7.956)
C4': (8.785,18.572,7.386)
C2': (8.008,18.898,9.641)
O2': (7.887,19.780,10.699)
N1: (5.625,18.486,9.010)
O4: (2.151,16.852,10.171)
O2: (4.582,20.511,9.216)
C6: (5.509,17.113,9.050)
C5: (4.388,16.465,9.411)
O3': (9.416,20.547,8.670)
OP1: (11.836,17.667,12.125)
OP2: (9.606,18.937,12.387)
C3': (8.421,14.506,10.517)
C1': (6.885,13.807,12.181)
C5': (10.183,15.183,12.252)
O6: (2.180,17.306,13.437)
O4': (8.117,14.128,12.813)
C8: (6.233,16.260,12.608)
C2: (2.608,13.816,12.813)
C6: (2.756,16.242,13.159)
C5: (4.145,16.055,12.906)
C4: (4.606,14.775,12.654)
P: (10.444,17.752,12.675)
C4': (9.163,14.175,11.829)
C2': (7.184,13.637,10.682)
O2': (7.552,12.282,10.438)
N1: (2.052,15.040,13.097)
N2: (1.792,12.761,12.765)
N3: (3.908,13.633,12.591)
N7: (5.175,16.975,12.886)
N9: (5.953,14.916,12.456)
O5': (9.584,16.493,12.217)
O3': (9.254,14.204,9.409)
OP2: (9.606,18.937,12.387)
C3': (8.421,14.506,10.517)
C1': (6.885,13.807,12.181)
C5': (10.183,15.183,12.252)
O6: (2.180,17.306,13.437)
O4': (8.117,14.128,12.813)
C8: (6.233,16.260,12.608)
C2: (2.608,13.816,12.813)
C6: (2.756,16.242,13.159)
C5: (4.145,16.055,12.906)
C4: (4.606,14.775,12.654)
P: (10.444,17.752,12.675)
C4': (9.163,14.175,11.829)
C2': (7.184,13.637,10.682)
O2': (7.552,12.282,10.438)
N1: (2.052,15.040,13.097)
N2: (1.792,12.761,12.765)
N3: (3.908,13.633,12.591)
N7: (5.175,16.975,12.886)
N9: (5.953,14.916,12.456)
O5': (9.584,16.493,12.217)
O3': (9.254,14.204,9.409)
Image (generated by PyMOL):