Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1P79:A4:A3
Extra
PDB:
ATOM 1 O3' G A 3 -6.566 9.919 3.461 1.00 5.97 O
ATOM 2 P U A 4 -5.883 10.075 2.006 1.00 8.62 P
ATOM 3 OP1 U A 4 -5.423 11.453 1.798 1.00 9.05 O
ATOM 4 OP2 U A 4 -6.817 9.474 1.040 1.00 10.59 O
ATOM 5 O5' U A 4 -4.600 9.190 2.241 1.00 9.05 O
ATOM 6 C5' U A 4 -3.820 8.866 1.109 1.00 8.19 C
ATOM 7 C4' U A 4 -2.370 8.986 1.477 1.00 7.74 C
ATOM 8 O4' U A 4 -2.042 10.387 1.589 1.00 7.56 O
ATOM 9 C3' U A 4 -1.980 8.322 2.807 1.00 8.24 C
ATOM 10 O3' U A 4 -0.796 7.581 2.637 1.00 8.83 O
ATOM 11 C2' U A 4 -1.819 9.517 3.750 1.00 7.09 C
ATOM 12 O2' U A 4 -0.942 9.354 4.836 1.00 8.10 O
ATOM 13 C1' U A 4 -1.281 10.542 2.779 1.00 6.74 C
ATOM 14 N1 U A 4 -1.382 11.954 3.199 1.00 5.79 N
ATOM 15 C2 U A 4 -0.244 12.659 3.525 1.00 4.63 C
ATOM 16 O2 U A 4 0.868 12.179 3.518 1.00 5.44 O
ATOM 17 N3 U A 4 -0.468 13.964 3.854 1.00 4.36 N
ATOM 18 C4 U A 4 -1.691 14.617 3.865 1.00 4.21 C
ATOM 19 O4 U A 4 -1.728 15.825 4.140 1.00 3.71 O
ATOM 20 C5 U A 4 -2.824 13.824 3.513 1.00 4.74 C
ATOM 21 C6 U A 4 -2.625 12.546 3.200 1.00 5.67 C
TER
ATOM 1 O3' G B 2 -3.678 7.428 8.189 1.00 5.20 O
ATOM 2 P G B 3 -3.567 7.195 6.624 1.00 5.32 P
ATOM 3 OP1 G B 3 -4.275 5.925 6.364 1.00 6.13 O
ATOM 4 OP2 G B 3 -2.178 7.359 6.179 1.00 6.45 O
ATOM 5 O5' G B 3 -4.394 8.402 6.000 1.00 5.18 O
ATOM 6 C5' G B 3 -5.807 8.381 6.164 1.00 5.09 C
ATOM 7 C4' G B 3 -6.369 9.754 5.900 1.00 4.89 C
ATOM 8 O4' G B 3 -5.937 10.649 6.944 1.00 4.33 O
ATOM 9 C3' G B 3 -5.896 10.437 4.631 1.00 5.12 C
ATOM 10 O3' G B 3 -6.566 9.919 3.461 1.00 5.97 O
ATOM 11 C2' G B 3 -6.208 11.886 4.924 1.00 4.34 C
ATOM 12 O2' G B 3 -7.559 12.223 4.657 1.00 4.71 O
ATOM 13 C1' G B 3 -5.891 11.958 6.417 1.00 3.88 C
ATOM 14 N9 G B 3 -4.567 12.531 6.666 1.00 3.25 N
ATOM 15 C8 G B 3 -3.343 11.892 6.717 1.00 3.68 C
ATOM 16 N7 G B 3 -2.347 12.719 6.905 1.00 3.55 N
ATOM 17 C5 G B 3 -2.965 13.974 6.939 1.00 3.24 C
ATOM 18 C6 G B 3 -2.431 15.259 7.091 1.00 3.06 C
ATOM 19 O6 G B 3 -1.236 15.590 7.210 1.00 2.85 O
ATOM 20 N1 G B 3 -3.406 16.261 7.073 1.00 2.98 N
ATOM 21 C2 G B 3 -4.757 16.028 6.920 1.00 3.23 C
ATOM 22 N2 G B 3 -5.573 17.088 6.923 1.00 3.85 N
ATOM 23 N3 G B 3 -5.260 14.817 6.758 1.00 3.20 N
ATOM 24 C4 G B 3 -4.327 13.855 6.795 1.00 3.24 C
ATOM 25 P U B 4 -5.883 10.075 2.006 1.00 8.62 P
ATOM 26 OP1 U B 4 -5.423 11.453 1.798 1.00 9.05 O
ATOM 27 OP2 U B 4 -6.817 9.474 1.040 1.00 10.59 O
ATOM 28 O5' U B 4 -4.600 9.190 2.241 1.00 9.05 O
TER
ATOM 2 P U A 4 -5.883 10.075 2.006 1.00 8.62 P
ATOM 3 OP1 U A 4 -5.423 11.453 1.798 1.00 9.05 O
ATOM 4 OP2 U A 4 -6.817 9.474 1.040 1.00 10.59 O
ATOM 5 O5' U A 4 -4.600 9.190 2.241 1.00 9.05 O
ATOM 6 C5' U A 4 -3.820 8.866 1.109 1.00 8.19 C
ATOM 7 C4' U A 4 -2.370 8.986 1.477 1.00 7.74 C
ATOM 8 O4' U A 4 -2.042 10.387 1.589 1.00 7.56 O
ATOM 9 C3' U A 4 -1.980 8.322 2.807 1.00 8.24 C
ATOM 10 O3' U A 4 -0.796 7.581 2.637 1.00 8.83 O
ATOM 11 C2' U A 4 -1.819 9.517 3.750 1.00 7.09 C
ATOM 12 O2' U A 4 -0.942 9.354 4.836 1.00 8.10 O
ATOM 13 C1' U A 4 -1.281 10.542 2.779 1.00 6.74 C
ATOM 14 N1 U A 4 -1.382 11.954 3.199 1.00 5.79 N
ATOM 15 C2 U A 4 -0.244 12.659 3.525 1.00 4.63 C
ATOM 16 O2 U A 4 0.868 12.179 3.518 1.00 5.44 O
ATOM 17 N3 U A 4 -0.468 13.964 3.854 1.00 4.36 N
ATOM 18 C4 U A 4 -1.691 14.617 3.865 1.00 4.21 C
ATOM 19 O4 U A 4 -1.728 15.825 4.140 1.00 3.71 O
ATOM 20 C5 U A 4 -2.824 13.824 3.513 1.00 4.74 C
ATOM 21 C6 U A 4 -2.625 12.546 3.200 1.00 5.67 C
TER
ATOM 1 O3' G B 2 -3.678 7.428 8.189 1.00 5.20 O
ATOM 2 P G B 3 -3.567 7.195 6.624 1.00 5.32 P
ATOM 3 OP1 G B 3 -4.275 5.925 6.364 1.00 6.13 O
ATOM 4 OP2 G B 3 -2.178 7.359 6.179 1.00 6.45 O
ATOM 5 O5' G B 3 -4.394 8.402 6.000 1.00 5.18 O
ATOM 6 C5' G B 3 -5.807 8.381 6.164 1.00 5.09 C
ATOM 7 C4' G B 3 -6.369 9.754 5.900 1.00 4.89 C
ATOM 8 O4' G B 3 -5.937 10.649 6.944 1.00 4.33 O
ATOM 9 C3' G B 3 -5.896 10.437 4.631 1.00 5.12 C
ATOM 10 O3' G B 3 -6.566 9.919 3.461 1.00 5.97 O
ATOM 11 C2' G B 3 -6.208 11.886 4.924 1.00 4.34 C
ATOM 12 O2' G B 3 -7.559 12.223 4.657 1.00 4.71 O
ATOM 13 C1' G B 3 -5.891 11.958 6.417 1.00 3.88 C
ATOM 14 N9 G B 3 -4.567 12.531 6.666 1.00 3.25 N
ATOM 15 C8 G B 3 -3.343 11.892 6.717 1.00 3.68 C
ATOM 16 N7 G B 3 -2.347 12.719 6.905 1.00 3.55 N
ATOM 17 C5 G B 3 -2.965 13.974 6.939 1.00 3.24 C
ATOM 18 C6 G B 3 -2.431 15.259 7.091 1.00 3.06 C
ATOM 19 O6 G B 3 -1.236 15.590 7.210 1.00 2.85 O
ATOM 20 N1 G B 3 -3.406 16.261 7.073 1.00 2.98 N
ATOM 21 C2 G B 3 -4.757 16.028 6.920 1.00 3.23 C
ATOM 22 N2 G B 3 -5.573 17.088 6.923 1.00 3.85 N
ATOM 23 N3 G B 3 -5.260 14.817 6.758 1.00 3.20 N
ATOM 24 C4 G B 3 -4.327 13.855 6.795 1.00 3.24 C
ATOM 25 P U B 4 -5.883 10.075 2.006 1.00 8.62 P
ATOM 26 OP1 U B 4 -5.423 11.453 1.798 1.00 9.05 O
ATOM 27 OP2 U B 4 -6.817 9.474 1.040 1.00 10.59 O
ATOM 28 O5' U B 4 -4.600 9.190 2.241 1.00 9.05 O
TER
Atoms:
C4: (-1.691,14.617,3.865)
N3: (-0.468,13.964,3.854)
OP1: (-5.423,11.453,1.798)
OP2: (-6.817,9.474,1.040)
C2: (-0.244,12.659,3.525)
C1': (-1.281,10.542,2.779)
C3': (-1.980,8.322,2.807)
O5': (-4.600,9.190,2.241)
O4': (-2.042,10.387,1.589)
C5': (-3.820,8.866,1.109)
P: (-5.883,10.075,2.006)
C4': (-2.370,8.986,1.477)
C2': (-1.819,9.517,3.750)
O2': (-0.942,9.354,4.836)
N1: (-1.382,11.954,3.199)
O4: (-1.728,15.825,4.140)
O2: (0.868,12.179,3.518)
C6: (-2.625,12.546,3.200)
C5: (-2.824,13.824,3.513)
O3': (-0.796,7.581,2.637)
N3: (-0.468,13.964,3.854)
OP1: (-5.423,11.453,1.798)
OP2: (-6.817,9.474,1.040)
C2: (-0.244,12.659,3.525)
C1': (-1.281,10.542,2.779)
C3': (-1.980,8.322,2.807)
O5': (-4.600,9.190,2.241)
O4': (-2.042,10.387,1.589)
C5': (-3.820,8.866,1.109)
P: (-5.883,10.075,2.006)
C4': (-2.370,8.986,1.477)
C2': (-1.819,9.517,3.750)
O2': (-0.942,9.354,4.836)
N1: (-1.382,11.954,3.199)
O4: (-1.728,15.825,4.140)
O2: (0.868,12.179,3.518)
C6: (-2.625,12.546,3.200)
C5: (-2.824,13.824,3.513)
O3': (-0.796,7.581,2.637)
OP1: (-4.275,5.925,6.364)
OP2: (-2.178,7.359,6.179)
C3': (-5.896,10.437,4.631)
C1': (-5.891,11.958,6.417)
C5': (-5.807,8.381,6.164)
O6: (-1.236,15.590,7.210)
O4': (-5.937,10.649,6.944)
C8: (-3.343,11.892,6.717)
C2: (-4.757,16.028,6.920)
C6: (-2.431,15.259,7.091)
C5: (-2.965,13.974,6.939)
C4: (-4.327,13.855,6.795)
P: (-3.567,7.195,6.624)
C4': (-6.369,9.754,5.900)
C2': (-6.208,11.886,4.924)
O2': (-7.559,12.223,4.657)
N1: (-3.406,16.261,7.073)
N2: (-5.573,17.088,6.923)
N3: (-5.260,14.817,6.758)
N7: (-2.347,12.719,6.905)
N9: (-4.567,12.531,6.666)
O5': (-4.394,8.402,6.000)
O3': (-6.566,9.919,3.461)
OP2: (-2.178,7.359,6.179)
C3': (-5.896,10.437,4.631)
C1': (-5.891,11.958,6.417)
C5': (-5.807,8.381,6.164)
O6: (-1.236,15.590,7.210)
O4': (-5.937,10.649,6.944)
C8: (-3.343,11.892,6.717)
C2: (-4.757,16.028,6.920)
C6: (-2.431,15.259,7.091)
C5: (-2.965,13.974,6.939)
C4: (-4.327,13.855,6.795)
P: (-3.567,7.195,6.624)
C4': (-6.369,9.754,5.900)
C2': (-6.208,11.886,4.924)
O2': (-7.559,12.223,4.657)
N1: (-3.406,16.261,7.073)
N2: (-5.573,17.088,6.923)
N3: (-5.260,14.817,6.758)
N7: (-2.347,12.719,6.905)
N9: (-4.567,12.531,6.666)
O5': (-4.394,8.402,6.000)
O3': (-6.566,9.919,3.461)
Image (generated by PyMOL):