ClaRNA

Doublet info:

Details

Nucleotide types: CU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1DRZ:B56:B54

Extra

PDB:
ATOM 1 O3' C A 55 26.224 70.521 12.534 1.00 66.14 O
ATOM 2 P C A 56 25.722 69.409 13.582 1.00 66.02 P
ATOM 3 OP1 C A 56 26.573 68.194 13.414 1.00 65.78 O
ATOM 4 OP2 C A 56 24.251 69.333 13.424 1.00 65.63 O
ATOM 5 O5' C A 56 26.053 70.031 15.007 1.00 65.41 O
ATOM 6 C5' C A 56 27.406 70.183 15.419 1.00 64.34 C
ATOM 7 C4' C A 56 27.465 70.950 16.707 1.00 63.69 C
ATOM 8 O4' C A 56 27.026 72.313 16.485 1.00 63.95 O
ATOM 9 C3' C A 56 26.540 70.422 17.783 1.00 63.09 C
ATOM 10 O3' C A 56 27.150 69.336 18.464 1.00 61.69 O
ATOM 11 C2' C A 56 26.366 71.647 18.669 1.00 63.55 C
ATOM 12 O2' C A 56 27.445 71.838 19.564 1.00 63.60 O
ATOM 13 C1' C A 56 26.311 72.766 17.622 1.00 64.16 C
ATOM 14 N1 C A 56 24.937 73.072 17.193 1.00 64.98 N
ATOM 15 C2 C A 56 24.084 73.750 18.077 1.00 65.38 C
ATOM 16 O2 C A 56 24.503 74.059 19.200 1.00 65.72 O
ATOM 17 N3 C A 56 22.827 74.050 17.683 1.00 65.65 N
ATOM 18 C4 C A 56 22.409 73.698 16.462 1.00 65.84 C
ATOM 19 N4 C A 56 21.159 74.037 16.114 1.00 65.87 N
ATOM 20 C5 C A 56 23.252 72.997 15.546 1.00 65.59 C
ATOM 21 C6 C A 56 24.497 72.707 15.952 1.00 65.38 C
ATOM 22 P G A 57 26.274 68.409 19.433 1.00 60.67 P
ATOM 23 OP1 G A 57 26.776 67.013 19.342 1.00 60.80 O
ATOM 24 OP2 G A 57 24.864 68.705 19.122 1.00 61.01 O
ATOM 25 O5' G A 57 26.587 68.971 20.887 1.00 61.04 O
TER

ATOM 1 O3' C B 53 15.698 71.697 8.413 1.00 56.98 O
ATOM 2 P U B 54 15.441 72.890 9.458 1.00 59.35 P
ATOM 3 OP1 U B 54 14.601 72.356 10.577 1.00 59.05 O
ATOM 4 OP2 U B 54 14.971 74.065 8.680 1.00 59.35 O
ATOM 5 O5' U B 54 16.886 73.229 10.059 1.00 60.55 O
ATOM 6 C5' U B 54 18.041 73.301 9.228 1.00 63.11 C
ATOM 7 C4' U B 54 19.303 73.460 10.067 1.00 64.64 C
ATOM 8 O4' U B 54 19.231 74.711 10.800 1.00 65.31 O
ATOM 9 C3' U B 54 19.469 72.367 11.136 1.00 65.39 C
ATOM 10 O3' U B 54 20.725 71.685 11.199 1.00 66.30 O
ATOM 11 C2' U B 54 18.983 72.970 12.451 1.00 65.65 C
ATOM 12 O2' U B 54 19.802 72.661 13.568 1.00 65.71 O
ATOM 13 C1' U B 54 19.139 74.466 12.193 1.00 65.95 C
ATOM 14 N1 U B 54 18.093 75.304 12.786 1.00 66.67 N
ATOM 15 C2 U B 54 18.478 76.198 13.780 1.00 67.03 C
ATOM 16 O2 U B 54 19.646 76.318 14.163 1.00 66.92 O
ATOM 17 N3 U B 54 17.452 76.941 14.315 1.00 67.29 N
ATOM 18 C4 U B 54 16.112 76.881 13.969 1.00 67.33 C
ATOM 19 O4 U B 54 15.297 77.603 14.554 1.00 67.57 O
ATOM 20 C5 U B 54 15.806 75.932 12.934 1.00 67.21 C
ATOM 21 C6 U B 54 16.784 75.199 12.390 1.00 66.80 C
ATOM 22 P C B 55 21.860 71.971 10.097 1.00 66.83 P
ATOM 23 OP1 C B 55 21.846 73.402 9.700 1.00 67.31 O
ATOM 24 OP2 C B 55 21.721 70.931 9.056 1.00 67.03 O
ATOM 25 O5' C B 55 23.226 71.758 10.875 1.00 66.72 O
TER

Atoms:
C2: (24.084,73.750,18.077)
OP1: (26.573,68.194,13.414)
OP2: (24.251,69.333,13.424)
C4: (22.409,73.698,16.462)
O5': (26.053,70.031,15.007)
C3': (26.540,70.422,17.783)
C1': (26.311,72.766,17.622)
O4': (27.026,72.313,16.485)
C5': (27.406,70.183,15.419)
P: (25.722,69.409,13.582)
O2: (24.503,74.059,19.200)
C4': (27.465,70.950,16.707)
C2': (26.366,71.647,18.669)
O2': (27.445,71.838,19.564)
N1: (24.937,73.072,17.193)
N3: (22.827,74.050,17.683)
N4: (21.159,74.037,16.114)
C6: (24.497,72.707,15.952)
C5: (23.252,72.997,15.546)
O3': (27.150,69.336,18.464)
C4: (16.112,76.881,13.969)
N3: (17.452,76.941,14.315)
OP1: (14.601,72.356,10.577)
OP2: (14.971,74.065,8.680)
C2: (18.478,76.198,13.780)
C1': (19.139,74.466,12.193)
C3': (19.469,72.367,11.136)
O5': (16.886,73.229,10.059)
O4': (19.231,74.711,10.800)
C5': (18.041,73.301,9.228)
P: (15.441,72.890,9.458)
C4': (19.303,73.460,10.067)
C2': (18.983,72.970,12.451)
O2': (19.802,72.661,13.568)
N1: (18.093,75.304,12.786)
O4: (15.297,77.603,14.554)
O2: (19.646,76.318,14.163)
C6: (16.784,75.199,12.390)
C5: (15.806,75.932,12.934)
O3': (20.725,71.685,11.199)
Image (generated by PyMOL):
PyMOL image
show in jmol