ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5H:51503:51488

Extra

PDB:
ATOM 1 O3' G A1502 170.371 -11.212 175.626 1.00 81.43 O
ATOM 2 P U A1503 170.496 -9.627 175.432 1.00 78.46 P
ATOM 3 OP1 U A1503 171.902 -9.266 175.681 1.00 78.33 O
ATOM 4 OP2 U A1503 169.453 -8.997 176.247 1.00 78.17 O
ATOM 5 O5' U A1503 170.151 -9.436 173.909 1.00 79.20 O
ATOM 6 C5' U A1503 170.866 -10.127 172.903 1.00 79.59 C
ATOM 7 C4' U A1503 170.521 -9.580 171.557 1.00 80.29 C
ATOM 8 O4' U A1503 169.145 -9.925 171.266 1.00 80.44 O
ATOM 9 C3' U A1503 170.613 -8.057 171.455 1.00 80.49 C
ATOM 10 O3' U A1503 171.211 -7.682 170.226 1.00 81.10 O
ATOM 11 C2' U A1503 169.161 -7.599 171.486 1.00 80.57 C
ATOM 12 O2' U A1503 168.890 -6.401 170.779 1.00 81.04 O
ATOM 13 C1' U A1503 168.445 -8.773 170.859 1.00 80.77 C
ATOM 14 N1 U A1503 167.074 -8.875 171.310 1.00 80.59 N
ATOM 15 C2 U A1503 166.100 -8.479 170.437 1.00 81.08 C
ATOM 16 O2 U A1503 166.366 -8.133 169.280 1.00 81.65 O
ATOM 17 N3 U A1503 164.837 -8.544 171.002 1.00 80.84 N
ATOM 18 C4 U A1503 164.499 -8.926 172.290 1.00 80.20 C
ATOM 19 O4 U A1503 163.331 -8.960 172.686 1.00 80.05 O
ATOM 20 C5 U A1503 165.599 -9.285 173.094 1.00 79.75 C
ATOM 21 C6 U A1503 166.821 -9.228 172.593 1.00 79.95 C
ATOM 22 P U A1504 172.266 -6.485 170.211 1.00116.66 P
ATOM 23 OP1 U A1504 172.164 -5.784 171.507 1.00116.12 O
ATOM 24 OP2 U A1504 172.030 -5.719 168.969 1.00117.34 O
ATOM 25 O5' U A1504 173.645 -7.261 170.128 1.00116.58 O
TER

ATOM 1 O3' A B1487 160.262 -2.754 178.689 1.00 50.76 O
ATOM 2 P G B1488 160.211 -4.344 178.563 1.00 58.33 P
ATOM 3 OP1 G B1488 158.942 -4.788 179.169 1.00 58.05 O
ATOM 4 OP2 G B1488 161.480 -4.872 179.113 1.00 58.21 O
ATOM 5 O5' G B1488 160.148 -4.565 177.002 1.00 59.01 O
ATOM 6 C5' G B1488 158.948 -4.336 176.292 1.00 59.24 C
ATOM 7 C4' G B1488 159.185 -4.413 174.817 1.00 59.90 C
ATOM 8 O4' G B1488 160.356 -3.643 174.478 1.00 60.04 O
ATOM 9 C3' G B1488 159.461 -5.799 174.289 1.00 60.29 C
ATOM 10 O3' G B1488 158.267 -6.460 173.956 1.00 60.45 O
ATOM 11 C2' G B1488 160.380 -5.564 173.095 1.00 60.85 C
ATOM 12 O2' G B1488 159.633 -5.281 171.920 1.00 61.32 O
ATOM 13 C1' G B1488 161.120 -4.303 173.508 1.00 60.58 C
ATOM 14 N9 G B1488 162.404 -4.620 174.097 1.00 60.42 N
ATOM 15 C8 G B1488 162.655 -4.687 175.425 1.00 59.86 C
ATOM 16 N7 G B1488 163.876 -5.017 175.663 1.00 59.86 N
ATOM 17 C5 G B1488 164.431 -5.178 174.406 1.00 60.48 C
ATOM 18 C6 G B1488 165.743 -5.532 174.034 1.00 60.78 C
ATOM 19 O6 G B1488 166.710 -5.777 174.768 1.00 60.55 O
ATOM 20 N1 G B1488 165.855 -5.578 172.649 1.00 61.42 N
ATOM 21 C2 G B1488 164.862 -5.299 171.760 1.00 61.72 C
ATOM 22 N2 G B1488 165.222 -5.394 170.482 1.00 62.35 N
ATOM 23 N3 G B1488 163.643 -4.968 172.092 1.00 61.45 N
ATOM 24 C4 G B1488 163.522 -4.931 173.417 1.00 60.83 C
ATOM 25 P A B1489 158.165 -8.034 174.113 1.00 71.99 P
ATOM 26 OP1 A B1489 156.734 -8.385 173.973 1.00 72.03 O
ATOM 27 OP2 A B1489 158.859 -8.383 175.346 1.00 71.51 O
ATOM 28 O5' A B1489 158.987 -8.552 172.853 1.00 72.65 O
TER

Atoms:
C4: (164.499,-8.926,172.290)
N3: (164.837,-8.544,171.002)
OP1: (171.902,-9.266,175.681)
OP2: (169.453,-8.997,176.247)
C2: (166.100,-8.479,170.437)
C1': (168.445,-8.773,170.859)
C3': (170.613,-8.057,171.455)
O5': (170.151,-9.436,173.909)
O4': (169.145,-9.925,171.266)
C5': (170.866,-10.127,172.903)
P: (170.496,-9.627,175.432)
C4': (170.521,-9.580,171.557)
C2': (169.161,-7.599,171.486)
O2': (168.890,-6.401,170.779)
N1: (167.074,-8.875,171.310)
O4: (163.331,-8.960,172.686)
O2: (166.366,-8.133,169.280)
C6: (166.821,-9.228,172.593)
C5: (165.599,-9.285,173.094)
O3': (171.211,-7.682,170.226)
OP1: (158.942,-4.788,179.169)
OP2: (161.480,-4.872,179.113)
C3': (159.461,-5.799,174.289)
C1': (161.120,-4.303,173.508)
C5': (158.948,-4.336,176.292)
O6: (166.710,-5.777,174.768)
O4': (160.356,-3.643,174.478)
C8: (162.655,-4.687,175.425)
C2: (164.862,-5.299,171.760)
C6: (165.743,-5.532,174.034)
C5: (164.431,-5.178,174.406)
C4: (163.522,-4.931,173.417)
P: (160.211,-4.344,178.563)
C4': (159.185,-4.413,174.817)
C2': (160.380,-5.564,173.095)
O2': (159.633,-5.281,171.920)
N1: (165.855,-5.578,172.649)
N2: (165.222,-5.394,170.482)
N3: (163.643,-4.968,172.092)
N7: (163.876,-5.017,175.663)
N9: (162.404,-4.620,174.097)
O5': (160.148,-4.565,177.002)
O3': (158.267,-6.460,173.956)
Image (generated by PyMOL):
PyMOL image
show in jmol