Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XD0:W11:W8
Extra
PDB:
ATOM 1 O3' U A 10 -7.585 7.155 41.985 1.00 52.43 O
ATOM 2 P U A 11 -7.026 5.660 41.902 1.00 57.41 P
ATOM 3 OP1 U A 11 -5.549 5.633 41.752 1.00 52.81 O
ATOM 4 OP2 U A 11 -7.712 5.047 43.069 1.00 55.86 O
ATOM 5 O5' U A 11 -7.639 5.165 40.531 1.00 54.28 O
ATOM 6 C5' U A 11 -9.049 5.189 40.339 1.00 56.52 C
ATOM 7 C4' U A 11 -9.471 4.125 39.364 1.00 58.77 C
ATOM 8 O4' U A 11 -9.452 4.693 38.031 1.00 57.36 O
ATOM 9 C3' U A 11 -8.528 2.924 39.343 1.00 58.93 C
ATOM 10 O3' U A 11 -9.253 1.709 39.149 1.00 63.55 O
ATOM 11 C2' U A 11 -7.613 3.200 38.156 1.00 56.45 C
ATOM 12 O2' U A 11 -7.093 2.029 37.562 1.00 58.64 O
ATOM 13 C1' U A 11 -8.535 3.981 37.217 1.00 56.75 C
ATOM 14 N1 U A 11 -7.811 4.966 36.369 1.00 53.39 N
ATOM 15 C2 U A 11 -8.069 4.942 35.004 1.00 53.73 C
ATOM 16 O2 U A 11 -8.841 4.164 34.453 1.00 57.06 O
ATOM 17 N3 U A 11 -7.377 5.869 34.273 1.00 50.91 N
ATOM 18 C4 U A 11 -6.479 6.794 34.735 1.00 48.68 C
ATOM 19 O4 U A 11 -5.962 7.536 33.904 1.00 47.30 O
ATOM 20 C5 U A 11 -6.262 6.770 36.151 1.00 48.92 C
ATOM 21 C6 U A 11 -6.922 5.876 36.898 1.00 50.77 C
ATOM 22 P U A 12 -9.728 0.921 40.477 1.00 72.12 P
ATOM 23 OP1 U A 12 -10.640 1.846 41.221 1.00 71.68 O
ATOM 24 OP2 U A 12 -8.459 0.465 41.134 1.00 67.22 O
ATOM 25 O5' U A 12 -10.607 -0.264 39.832 1.00 74.79 O
TER
ATOM 1 O3' U B 7 3.146 5.354 38.733 1.00 56.70 O
ATOM 2 P G B 8 1.973 6.175 39.476 1.00 55.39 P
ATOM 3 OP1 G B 8 2.645 7.398 39.992 1.00 55.01 O
ATOM 4 OP2 G B 8 1.293 5.281 40.445 1.00 55.48 O
ATOM 5 O5' G B 8 0.927 6.503 38.340 1.00 51.34 O
ATOM 6 C5' G B 8 1.369 7.090 37.142 1.00 50.00 C
ATOM 7 C4' G B 8 0.193 7.613 36.379 1.00 46.75 C
ATOM 8 O4' G B 8 -0.683 6.522 35.963 1.00 46.33 O
ATOM 9 C3' G B 8 -0.685 8.598 37.136 1.00 44.24 C
ATOM 10 O3' G B 8 -1.011 9.686 36.276 1.00 41.44 O
ATOM 11 C2' G B 8 -1.947 7.780 37.406 1.00 45.01 C
ATOM 12 O2' G B 8 -3.126 8.537 37.556 1.00 43.76 O
ATOM 13 C1' G B 8 -2.013 6.940 36.148 1.00 45.63 C
ATOM 14 N9 G B 8 -2.947 5.815 36.179 1.00 45.98 N
ATOM 15 C8 G B 8 -3.568 5.236 37.254 1.00 47.59 C
ATOM 16 N7 G B 8 -4.374 4.249 36.931 1.00 48.38 N
ATOM 17 C5 G B 8 -4.300 4.176 35.542 1.00 47.23 C
ATOM 18 C6 G B 8 -4.937 3.316 34.591 1.00 48.10 C
ATOM 19 O6 G B 8 -5.743 2.392 34.747 1.00 50.30 O
ATOM 20 N1 G B 8 -4.560 3.602 33.297 1.00 46.88 N
ATOM 21 C2 G B 8 -3.684 4.586 32.942 1.00 45.12 C
ATOM 22 N2 G B 8 -3.436 4.715 31.627 1.00 44.66 N
ATOM 23 N3 G B 8 -3.087 5.397 33.802 1.00 44.58 N
ATOM 24 C4 G B 8 -3.431 5.145 35.079 1.00 45.66 C
ATOM 25 P A B 9 -0.489 11.156 36.584 1.00 39.37 P
ATOM 26 OP1 A B 9 0.927 11.081 37.014 1.00 41.71 O
ATOM 27 OP2 A B 9 -0.862 11.953 35.390 1.00 36.90 O
ATOM 28 O5' A B 9 -1.406 11.533 37.824 1.00 39.11 O
TER
ATOM 2 P U A 11 -7.026 5.660 41.902 1.00 57.41 P
ATOM 3 OP1 U A 11 -5.549 5.633 41.752 1.00 52.81 O
ATOM 4 OP2 U A 11 -7.712 5.047 43.069 1.00 55.86 O
ATOM 5 O5' U A 11 -7.639 5.165 40.531 1.00 54.28 O
ATOM 6 C5' U A 11 -9.049 5.189 40.339 1.00 56.52 C
ATOM 7 C4' U A 11 -9.471 4.125 39.364 1.00 58.77 C
ATOM 8 O4' U A 11 -9.452 4.693 38.031 1.00 57.36 O
ATOM 9 C3' U A 11 -8.528 2.924 39.343 1.00 58.93 C
ATOM 10 O3' U A 11 -9.253 1.709 39.149 1.00 63.55 O
ATOM 11 C2' U A 11 -7.613 3.200 38.156 1.00 56.45 C
ATOM 12 O2' U A 11 -7.093 2.029 37.562 1.00 58.64 O
ATOM 13 C1' U A 11 -8.535 3.981 37.217 1.00 56.75 C
ATOM 14 N1 U A 11 -7.811 4.966 36.369 1.00 53.39 N
ATOM 15 C2 U A 11 -8.069 4.942 35.004 1.00 53.73 C
ATOM 16 O2 U A 11 -8.841 4.164 34.453 1.00 57.06 O
ATOM 17 N3 U A 11 -7.377 5.869 34.273 1.00 50.91 N
ATOM 18 C4 U A 11 -6.479 6.794 34.735 1.00 48.68 C
ATOM 19 O4 U A 11 -5.962 7.536 33.904 1.00 47.30 O
ATOM 20 C5 U A 11 -6.262 6.770 36.151 1.00 48.92 C
ATOM 21 C6 U A 11 -6.922 5.876 36.898 1.00 50.77 C
ATOM 22 P U A 12 -9.728 0.921 40.477 1.00 72.12 P
ATOM 23 OP1 U A 12 -10.640 1.846 41.221 1.00 71.68 O
ATOM 24 OP2 U A 12 -8.459 0.465 41.134 1.00 67.22 O
ATOM 25 O5' U A 12 -10.607 -0.264 39.832 1.00 74.79 O
TER
ATOM 1 O3' U B 7 3.146 5.354 38.733 1.00 56.70 O
ATOM 2 P G B 8 1.973 6.175 39.476 1.00 55.39 P
ATOM 3 OP1 G B 8 2.645 7.398 39.992 1.00 55.01 O
ATOM 4 OP2 G B 8 1.293 5.281 40.445 1.00 55.48 O
ATOM 5 O5' G B 8 0.927 6.503 38.340 1.00 51.34 O
ATOM 6 C5' G B 8 1.369 7.090 37.142 1.00 50.00 C
ATOM 7 C4' G B 8 0.193 7.613 36.379 1.00 46.75 C
ATOM 8 O4' G B 8 -0.683 6.522 35.963 1.00 46.33 O
ATOM 9 C3' G B 8 -0.685 8.598 37.136 1.00 44.24 C
ATOM 10 O3' G B 8 -1.011 9.686 36.276 1.00 41.44 O
ATOM 11 C2' G B 8 -1.947 7.780 37.406 1.00 45.01 C
ATOM 12 O2' G B 8 -3.126 8.537 37.556 1.00 43.76 O
ATOM 13 C1' G B 8 -2.013 6.940 36.148 1.00 45.63 C
ATOM 14 N9 G B 8 -2.947 5.815 36.179 1.00 45.98 N
ATOM 15 C8 G B 8 -3.568 5.236 37.254 1.00 47.59 C
ATOM 16 N7 G B 8 -4.374 4.249 36.931 1.00 48.38 N
ATOM 17 C5 G B 8 -4.300 4.176 35.542 1.00 47.23 C
ATOM 18 C6 G B 8 -4.937 3.316 34.591 1.00 48.10 C
ATOM 19 O6 G B 8 -5.743 2.392 34.747 1.00 50.30 O
ATOM 20 N1 G B 8 -4.560 3.602 33.297 1.00 46.88 N
ATOM 21 C2 G B 8 -3.684 4.586 32.942 1.00 45.12 C
ATOM 22 N2 G B 8 -3.436 4.715 31.627 1.00 44.66 N
ATOM 23 N3 G B 8 -3.087 5.397 33.802 1.00 44.58 N
ATOM 24 C4 G B 8 -3.431 5.145 35.079 1.00 45.66 C
ATOM 25 P A B 9 -0.489 11.156 36.584 1.00 39.37 P
ATOM 26 OP1 A B 9 0.927 11.081 37.014 1.00 41.71 O
ATOM 27 OP2 A B 9 -0.862 11.953 35.390 1.00 36.90 O
ATOM 28 O5' A B 9 -1.406 11.533 37.824 1.00 39.11 O
TER
Atoms:
C4: (-6.479,6.794,34.735)
N3: (-7.377,5.869,34.273)
OP1: (-5.549,5.633,41.752)
OP2: (-7.712,5.047,43.069)
C2: (-8.069,4.942,35.004)
C1': (-8.535,3.981,37.217)
C3': (-8.528,2.924,39.343)
O5': (-7.639,5.165,40.531)
O4': (-9.452,4.693,38.031)
C5': (-9.049,5.189,40.339)
P: (-7.026,5.660,41.902)
C4': (-9.471,4.125,39.364)
C2': (-7.613,3.200,38.156)
O2': (-7.093,2.029,37.562)
N1: (-7.811,4.966,36.369)
O4: (-5.962,7.536,33.904)
O2: (-8.841,4.164,34.453)
C6: (-6.922,5.876,36.898)
C5: (-6.262,6.770,36.151)
O3': (-9.253,1.709,39.149)
N3: (-7.377,5.869,34.273)
OP1: (-5.549,5.633,41.752)
OP2: (-7.712,5.047,43.069)
C2: (-8.069,4.942,35.004)
C1': (-8.535,3.981,37.217)
C3': (-8.528,2.924,39.343)
O5': (-7.639,5.165,40.531)
O4': (-9.452,4.693,38.031)
C5': (-9.049,5.189,40.339)
P: (-7.026,5.660,41.902)
C4': (-9.471,4.125,39.364)
C2': (-7.613,3.200,38.156)
O2': (-7.093,2.029,37.562)
N1: (-7.811,4.966,36.369)
O4: (-5.962,7.536,33.904)
O2: (-8.841,4.164,34.453)
C6: (-6.922,5.876,36.898)
C5: (-6.262,6.770,36.151)
O3': (-9.253,1.709,39.149)
OP1: (2.645,7.398,39.992)
OP2: (1.293,5.281,40.445)
C3': (-0.685,8.598,37.136)
C1': (-2.013,6.940,36.148)
C5': (1.369,7.090,37.142)
O6: (-5.743,2.392,34.747)
O4': (-0.683,6.522,35.963)
C8: (-3.568,5.236,37.254)
C2: (-3.684,4.586,32.942)
C6: (-4.937,3.316,34.591)
C5: (-4.300,4.176,35.542)
C4: (-3.431,5.145,35.079)
P: (1.973,6.175,39.476)
C4': (0.193,7.613,36.379)
C2': (-1.947,7.780,37.406)
O2': (-3.126,8.537,37.556)
N1: (-4.560,3.602,33.297)
N2: (-3.436,4.715,31.627)
N3: (-3.087,5.397,33.802)
N7: (-4.374,4.249,36.931)
N9: (-2.947,5.815,36.179)
O5': (0.927,6.503,38.340)
O3': (-1.011,9.686,36.276)
OP2: (1.293,5.281,40.445)
C3': (-0.685,8.598,37.136)
C1': (-2.013,6.940,36.148)
C5': (1.369,7.090,37.142)
O6: (-5.743,2.392,34.747)
O4': (-0.683,6.522,35.963)
C8: (-3.568,5.236,37.254)
C2: (-3.684,4.586,32.942)
C6: (-4.937,3.316,34.591)
C5: (-4.300,4.176,35.542)
C4: (-3.431,5.145,35.079)
P: (1.973,6.175,39.476)
C4': (0.193,7.613,36.379)
C2': (-1.947,7.780,37.406)
O2': (-3.126,8.537,37.556)
N1: (-4.560,3.602,33.297)
N2: (-3.436,4.715,31.627)
N3: (-3.087,5.397,33.802)
N7: (-4.374,4.249,36.931)
N9: (-2.947,5.815,36.179)
O5': (0.927,6.503,38.340)
O3': (-1.011,9.686,36.276)
Image (generated by PyMOL):