Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:A18:A16
Extra
PDB:
ATOM 1 O3' U A 17 -4.807 -12.573 -2.234 1.00 38.34 O
ATOM 2 P U A 18 -3.906 -13.238 -1.090 1.00 39.03 P
ATOM 3 OP1 U A 18 -3.704 -12.202 -0.042 1.00 38.83 O
ATOM 4 OP2 U A 18 -2.728 -13.833 -1.767 1.00 38.64 O
ATOM 5 O5' U A 18 -4.811 -14.409 -0.486 1.00 38.16 O
ATOM 6 C5' U A 18 -5.446 -14.266 0.812 1.00 37.65 C
ATOM 7 C4' U A 18 -6.234 -15.512 1.162 1.00 37.18 C
ATOM 8 O4' U A 18 -7.219 -15.755 0.127 1.00 37.16 O
ATOM 9 C3' U A 18 -5.414 -16.794 1.289 1.00 36.82 C
ATOM 10 O3' U A 18 -6.023 -17.717 2.209 1.00 37.34 O
ATOM 11 C2' U A 18 -5.577 -17.421 -0.089 1.00 36.38 C
ATOM 12 O2' U A 18 -5.417 -18.820 -0.061 1.00 36.64 O
ATOM 13 C1' U A 18 -7.020 -17.038 -0.418 1.00 36.50 C
ATOM 14 N1 U A 18 -7.375 -16.984 -1.843 1.00 35.91 N
ATOM 15 C2 U A 18 -8.618 -17.482 -2.210 1.00 35.39 C
ATOM 16 O2 U A 18 -9.403 -17.986 -1.413 1.00 33.90 O
ATOM 17 N3 U A 18 -8.911 -17.366 -3.544 1.00 35.41 N
ATOM 18 C4 U A 18 -8.117 -16.819 -4.526 1.00 35.10 C
ATOM 19 O4 U A 18 -8.560 -16.707 -5.668 1.00 33.35 O
ATOM 20 C5 U A 18 -6.843 -16.351 -4.072 1.00 35.62 C
ATOM 21 C6 U A 18 -6.523 -16.447 -2.780 1.00 35.99 C
ATOM 22 P C A 19 -6.692 -17.196 3.588 1.00 38.64 P
ATOM 23 OP1 C A 19 -5.946 -15.994 4.071 1.00 38.43 O
ATOM 24 OP2 C A 19 -6.838 -18.378 4.487 1.00 38.26 O
ATOM 25 O5' C A 19 -8.169 -16.761 3.164 1.00 36.39 O
TER
ATOM 1 O3' U B 15 0.816 -19.198 -5.544 1.00 35.02 O
ATOM 2 P G B 16 0.275 -17.803 -4.960 1.00 35.70 P
ATOM 3 OP1 G B 16 1.377 -16.816 -5.104 1.00 35.79 O
ATOM 4 OP2 G B 16 -0.316 -18.051 -3.627 1.00 36.00 O
ATOM 5 O5' G B 16 -0.913 -17.417 -5.943 1.00 35.88 O
ATOM 6 C5' G B 16 -0.668 -17.215 -7.344 1.00 36.41 C
ATOM 7 C4' G B 16 -1.965 -17.245 -8.116 1.00 36.88 C
ATOM 8 O4' G B 16 -2.583 -18.550 -7.969 1.00 36.29 O
ATOM 9 C3' G B 16 -3.046 -16.265 -7.678 1.00 37.47 C
ATOM 10 O3' G B 16 -2.840 -14.973 -8.241 1.00 38.91 O
ATOM 11 C2' G B 16 -4.320 -16.933 -8.184 1.00 36.88 C
ATOM 12 O2' G B 16 -4.565 -16.682 -9.555 1.00 37.29 O
ATOM 13 C1' G B 16 -3.995 -18.416 -7.990 1.00 35.93 C
ATOM 14 N9 G B 16 -4.541 -18.944 -6.740 1.00 34.81 N
ATOM 15 C8 G B 16 -3.864 -19.196 -5.571 1.00 34.15 C
ATOM 16 N7 G B 16 -4.640 -19.624 -4.612 1.00 33.48 N
ATOM 17 C5 G B 16 -5.906 -19.664 -5.183 1.00 32.64 C
ATOM 18 C6 G B 16 -7.166 -20.024 -4.620 1.00 32.22 C
ATOM 19 O6 G B 16 -7.425 -20.374 -3.465 1.00 30.85 O
ATOM 20 N1 G B 16 -8.189 -19.925 -5.554 1.00 31.35 N
ATOM 21 C2 G B 16 -8.033 -19.518 -6.853 1.00 32.27 C
ATOM 22 N2 G B 16 -9.143 -19.482 -7.596 1.00 32.53 N
ATOM 23 N3 G B 16 -6.873 -19.167 -7.386 1.00 33.01 N
ATOM 24 C4 G B 16 -5.859 -19.264 -6.500 1.00 33.18 C
ATOM 25 P U B 17 -3.794 -13.749 -7.813 1.00 40.52 P
ATOM 26 OP1 U B 17 -5.153 -14.065 -8.305 1.00 41.03 O
ATOM 27 OP2 U B 17 -3.130 -12.492 -8.247 1.00 41.60 O
ATOM 28 O5' U B 17 -3.831 -13.771 -6.218 1.00 40.29 O
TER
ATOM 2 P U A 18 -3.906 -13.238 -1.090 1.00 39.03 P
ATOM 3 OP1 U A 18 -3.704 -12.202 -0.042 1.00 38.83 O
ATOM 4 OP2 U A 18 -2.728 -13.833 -1.767 1.00 38.64 O
ATOM 5 O5' U A 18 -4.811 -14.409 -0.486 1.00 38.16 O
ATOM 6 C5' U A 18 -5.446 -14.266 0.812 1.00 37.65 C
ATOM 7 C4' U A 18 -6.234 -15.512 1.162 1.00 37.18 C
ATOM 8 O4' U A 18 -7.219 -15.755 0.127 1.00 37.16 O
ATOM 9 C3' U A 18 -5.414 -16.794 1.289 1.00 36.82 C
ATOM 10 O3' U A 18 -6.023 -17.717 2.209 1.00 37.34 O
ATOM 11 C2' U A 18 -5.577 -17.421 -0.089 1.00 36.38 C
ATOM 12 O2' U A 18 -5.417 -18.820 -0.061 1.00 36.64 O
ATOM 13 C1' U A 18 -7.020 -17.038 -0.418 1.00 36.50 C
ATOM 14 N1 U A 18 -7.375 -16.984 -1.843 1.00 35.91 N
ATOM 15 C2 U A 18 -8.618 -17.482 -2.210 1.00 35.39 C
ATOM 16 O2 U A 18 -9.403 -17.986 -1.413 1.00 33.90 O
ATOM 17 N3 U A 18 -8.911 -17.366 -3.544 1.00 35.41 N
ATOM 18 C4 U A 18 -8.117 -16.819 -4.526 1.00 35.10 C
ATOM 19 O4 U A 18 -8.560 -16.707 -5.668 1.00 33.35 O
ATOM 20 C5 U A 18 -6.843 -16.351 -4.072 1.00 35.62 C
ATOM 21 C6 U A 18 -6.523 -16.447 -2.780 1.00 35.99 C
ATOM 22 P C A 19 -6.692 -17.196 3.588 1.00 38.64 P
ATOM 23 OP1 C A 19 -5.946 -15.994 4.071 1.00 38.43 O
ATOM 24 OP2 C A 19 -6.838 -18.378 4.487 1.00 38.26 O
ATOM 25 O5' C A 19 -8.169 -16.761 3.164 1.00 36.39 O
TER
ATOM 1 O3' U B 15 0.816 -19.198 -5.544 1.00 35.02 O
ATOM 2 P G B 16 0.275 -17.803 -4.960 1.00 35.70 P
ATOM 3 OP1 G B 16 1.377 -16.816 -5.104 1.00 35.79 O
ATOM 4 OP2 G B 16 -0.316 -18.051 -3.627 1.00 36.00 O
ATOM 5 O5' G B 16 -0.913 -17.417 -5.943 1.00 35.88 O
ATOM 6 C5' G B 16 -0.668 -17.215 -7.344 1.00 36.41 C
ATOM 7 C4' G B 16 -1.965 -17.245 -8.116 1.00 36.88 C
ATOM 8 O4' G B 16 -2.583 -18.550 -7.969 1.00 36.29 O
ATOM 9 C3' G B 16 -3.046 -16.265 -7.678 1.00 37.47 C
ATOM 10 O3' G B 16 -2.840 -14.973 -8.241 1.00 38.91 O
ATOM 11 C2' G B 16 -4.320 -16.933 -8.184 1.00 36.88 C
ATOM 12 O2' G B 16 -4.565 -16.682 -9.555 1.00 37.29 O
ATOM 13 C1' G B 16 -3.995 -18.416 -7.990 1.00 35.93 C
ATOM 14 N9 G B 16 -4.541 -18.944 -6.740 1.00 34.81 N
ATOM 15 C8 G B 16 -3.864 -19.196 -5.571 1.00 34.15 C
ATOM 16 N7 G B 16 -4.640 -19.624 -4.612 1.00 33.48 N
ATOM 17 C5 G B 16 -5.906 -19.664 -5.183 1.00 32.64 C
ATOM 18 C6 G B 16 -7.166 -20.024 -4.620 1.00 32.22 C
ATOM 19 O6 G B 16 -7.425 -20.374 -3.465 1.00 30.85 O
ATOM 20 N1 G B 16 -8.189 -19.925 -5.554 1.00 31.35 N
ATOM 21 C2 G B 16 -8.033 -19.518 -6.853 1.00 32.27 C
ATOM 22 N2 G B 16 -9.143 -19.482 -7.596 1.00 32.53 N
ATOM 23 N3 G B 16 -6.873 -19.167 -7.386 1.00 33.01 N
ATOM 24 C4 G B 16 -5.859 -19.264 -6.500 1.00 33.18 C
ATOM 25 P U B 17 -3.794 -13.749 -7.813 1.00 40.52 P
ATOM 26 OP1 U B 17 -5.153 -14.065 -8.305 1.00 41.03 O
ATOM 27 OP2 U B 17 -3.130 -12.492 -8.247 1.00 41.60 O
ATOM 28 O5' U B 17 -3.831 -13.771 -6.218 1.00 40.29 O
TER
Atoms:
C4: (-8.117,-16.819,-4.526)
N3: (-8.911,-17.366,-3.544)
OP1: (-3.704,-12.202,-0.042)
OP2: (-2.728,-13.833,-1.767)
C2: (-8.618,-17.482,-2.210)
C1': (-7.020,-17.038,-0.418)
C3': (-5.414,-16.794,1.289)
O5': (-4.811,-14.409,-0.486)
O4': (-7.219,-15.755,0.127)
C5': (-5.446,-14.266,0.812)
P: (-3.906,-13.238,-1.090)
C4': (-6.234,-15.512,1.162)
C2': (-5.577,-17.421,-0.089)
O2': (-5.417,-18.820,-0.061)
N1: (-7.375,-16.984,-1.843)
O4: (-8.560,-16.707,-5.668)
O2: (-9.403,-17.986,-1.413)
C6: (-6.523,-16.447,-2.780)
C5: (-6.843,-16.351,-4.072)
O3': (-6.023,-17.717,2.209)
N3: (-8.911,-17.366,-3.544)
OP1: (-3.704,-12.202,-0.042)
OP2: (-2.728,-13.833,-1.767)
C2: (-8.618,-17.482,-2.210)
C1': (-7.020,-17.038,-0.418)
C3': (-5.414,-16.794,1.289)
O5': (-4.811,-14.409,-0.486)
O4': (-7.219,-15.755,0.127)
C5': (-5.446,-14.266,0.812)
P: (-3.906,-13.238,-1.090)
C4': (-6.234,-15.512,1.162)
C2': (-5.577,-17.421,-0.089)
O2': (-5.417,-18.820,-0.061)
N1: (-7.375,-16.984,-1.843)
O4: (-8.560,-16.707,-5.668)
O2: (-9.403,-17.986,-1.413)
C6: (-6.523,-16.447,-2.780)
C5: (-6.843,-16.351,-4.072)
O3': (-6.023,-17.717,2.209)
OP1: (1.377,-16.816,-5.104)
OP2: (-0.316,-18.051,-3.627)
C3': (-3.046,-16.265,-7.678)
C1': (-3.995,-18.416,-7.990)
C5': (-0.668,-17.215,-7.344)
O6: (-7.425,-20.374,-3.465)
O4': (-2.583,-18.550,-7.969)
C8: (-3.864,-19.196,-5.571)
C2: (-8.033,-19.518,-6.853)
C6: (-7.166,-20.024,-4.620)
C5: (-5.906,-19.664,-5.183)
C4: (-5.859,-19.264,-6.500)
P: (0.275,-17.803,-4.960)
C4': (-1.965,-17.245,-8.116)
C2': (-4.320,-16.933,-8.184)
O2': (-4.565,-16.682,-9.555)
N1: (-8.189,-19.925,-5.554)
N2: (-9.143,-19.482,-7.596)
N3: (-6.873,-19.167,-7.386)
N7: (-4.640,-19.624,-4.612)
N9: (-4.541,-18.944,-6.740)
O5': (-0.913,-17.417,-5.943)
O3': (-2.840,-14.973,-8.241)
OP2: (-0.316,-18.051,-3.627)
C3': (-3.046,-16.265,-7.678)
C1': (-3.995,-18.416,-7.990)
C5': (-0.668,-17.215,-7.344)
O6: (-7.425,-20.374,-3.465)
O4': (-2.583,-18.550,-7.969)
C8: (-3.864,-19.196,-5.571)
C2: (-8.033,-19.518,-6.853)
C6: (-7.166,-20.024,-4.620)
C5: (-5.906,-19.664,-5.183)
C4: (-5.859,-19.264,-6.500)
P: (0.275,-17.803,-4.960)
C4': (-1.965,-17.245,-8.116)
C2': (-4.320,-16.933,-8.184)
O2': (-4.565,-16.682,-9.555)
N1: (-8.189,-19.925,-5.554)
N2: (-9.143,-19.482,-7.596)
N3: (-6.873,-19.167,-7.386)
N7: (-4.640,-19.624,-4.612)
N9: (-4.541,-18.944,-6.740)
O5': (-0.913,-17.417,-5.943)
O3': (-2.840,-14.973,-8.241)
Image (generated by PyMOL):