Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2377:A2325
Extra
PDB:
ATOM 1 O3' U A2376 56.093 117.011 94.622 1.00 40.76 O
ATOM 2 P C A2377 56.322 116.393 93.140 1.00 40.65 P
ATOM 3 OP1 C A2377 55.607 117.271 92.154 1.00 41.28 O
ATOM 4 OP2 C A2377 55.927 114.991 93.246 1.00 39.74 O
ATOM 5 O5' C A2377 57.904 116.472 92.868 1.00 39.72 O
ATOM 6 C5' C A2377 58.661 117.717 93.023 1.00 36.51 C
ATOM 7 C4' C A2377 60.112 117.563 92.552 1.00 36.85 C
ATOM 8 O4' C A2377 60.778 116.502 93.263 1.00 37.71 O
ATOM 9 C3' C A2377 60.366 117.242 91.082 1.00 36.17 C
ATOM 10 O3' C A2377 60.562 118.441 90.331 1.00 36.18 O
ATOM 11 C2' C A2377 61.675 116.431 91.087 1.00 38.22 C
ATOM 12 O2' C A2377 62.771 117.062 90.451 1.00 39.26 O
ATOM 13 C1' C A2377 61.965 116.196 92.579 1.00 38.19 C
ATOM 14 N1 C A2377 62.394 114.827 92.984 1.00 39.44 N
ATOM 15 C2 C A2377 63.453 114.687 93.894 1.00 40.00 C
ATOM 16 O2 C A2377 64.043 115.698 94.309 1.00 40.33 O
ATOM 17 N3 C A2377 63.811 113.450 94.304 1.00 39.02 N
ATOM 18 C4 C A2377 63.176 112.375 93.847 1.00 37.81 C
ATOM 19 N4 C A2377 63.569 111.195 94.310 1.00 38.99 N
ATOM 20 C5 C A2377 62.116 112.471 92.907 1.00 38.42 C
ATOM 21 C6 C A2377 61.759 113.709 92.503 1.00 39.06 C
ATOM 22 P G A2378 59.541 118.851 89.160 1.00 35.83 P
ATOM 23 OP1 G A2378 58.364 117.966 89.235 1.00 36.18 O
ATOM 24 OP2 G A2378 60.268 118.991 87.884 1.00 36.17 O
ATOM 25 O5' G A2378 59.098 120.316 89.571 1.00 36.19 O
TER
ATOM 1 O3' A B2324 60.193 103.801 92.534 1.00 41.20 O
ATOM 2 P U B2325 60.672 103.622 94.051 1.00 42.66 P
ATOM 3 OP1 U B2325 60.578 102.195 94.446 1.00 45.07 O
ATOM 4 OP2 U B2325 59.930 104.640 94.838 1.00 42.72 O
ATOM 5 O5' U B2325 62.213 104.017 94.026 1.00 43.41 O
ATOM 6 C5' U B2325 63.103 103.562 95.057 1.00 43.16 C
ATOM 7 C4' U B2325 64.086 104.651 95.403 1.00 43.83 C
ATOM 8 O4' U B2325 64.874 104.927 94.222 1.00 43.71 O
ATOM 9 C3' U B2325 63.449 105.980 95.800 1.00 42.83 C
ATOM 10 O3' U B2325 64.342 106.687 96.636 1.00 42.43 O
ATOM 11 C2' U B2325 63.335 106.691 94.460 1.00 43.06 C
ATOM 12 O2' U B2325 63.350 108.096 94.492 1.00 43.26 O
ATOM 13 C1' U B2325 64.618 106.243 93.785 1.00 43.56 C
ATOM 14 N1 U B2325 64.472 106.251 92.325 1.00 44.84 N
ATOM 15 C2 U B2325 64.986 107.339 91.671 1.00 45.22 C
ATOM 16 O2 U B2325 65.527 108.269 92.252 1.00 46.21 O
ATOM 17 N3 U B2325 64.828 107.325 90.314 1.00 45.92 N
ATOM 18 C4 U B2325 64.206 106.363 89.554 1.00 46.84 C
ATOM 19 O4 U B2325 64.125 106.526 88.340 1.00 46.83 O
ATOM 20 C5 U B2325 63.683 105.259 90.293 1.00 46.12 C
ATOM 21 C6 U B2325 63.834 105.235 91.624 1.00 45.62 C
ATOM 22 P A B2326 63.953 106.986 98.165 1.00 40.96 P
ATOM 23 OP1 A B2326 63.567 105.707 98.795 1.00 41.23 O
ATOM 24 OP2 A B2326 63.037 108.145 98.231 1.00 41.67 O
ATOM 25 O5' A B2326 65.334 107.467 98.799 1.00 42.48 O
TER
ATOM 2 P C A2377 56.322 116.393 93.140 1.00 40.65 P
ATOM 3 OP1 C A2377 55.607 117.271 92.154 1.00 41.28 O
ATOM 4 OP2 C A2377 55.927 114.991 93.246 1.00 39.74 O
ATOM 5 O5' C A2377 57.904 116.472 92.868 1.00 39.72 O
ATOM 6 C5' C A2377 58.661 117.717 93.023 1.00 36.51 C
ATOM 7 C4' C A2377 60.112 117.563 92.552 1.00 36.85 C
ATOM 8 O4' C A2377 60.778 116.502 93.263 1.00 37.71 O
ATOM 9 C3' C A2377 60.366 117.242 91.082 1.00 36.17 C
ATOM 10 O3' C A2377 60.562 118.441 90.331 1.00 36.18 O
ATOM 11 C2' C A2377 61.675 116.431 91.087 1.00 38.22 C
ATOM 12 O2' C A2377 62.771 117.062 90.451 1.00 39.26 O
ATOM 13 C1' C A2377 61.965 116.196 92.579 1.00 38.19 C
ATOM 14 N1 C A2377 62.394 114.827 92.984 1.00 39.44 N
ATOM 15 C2 C A2377 63.453 114.687 93.894 1.00 40.00 C
ATOM 16 O2 C A2377 64.043 115.698 94.309 1.00 40.33 O
ATOM 17 N3 C A2377 63.811 113.450 94.304 1.00 39.02 N
ATOM 18 C4 C A2377 63.176 112.375 93.847 1.00 37.81 C
ATOM 19 N4 C A2377 63.569 111.195 94.310 1.00 38.99 N
ATOM 20 C5 C A2377 62.116 112.471 92.907 1.00 38.42 C
ATOM 21 C6 C A2377 61.759 113.709 92.503 1.00 39.06 C
ATOM 22 P G A2378 59.541 118.851 89.160 1.00 35.83 P
ATOM 23 OP1 G A2378 58.364 117.966 89.235 1.00 36.18 O
ATOM 24 OP2 G A2378 60.268 118.991 87.884 1.00 36.17 O
ATOM 25 O5' G A2378 59.098 120.316 89.571 1.00 36.19 O
TER
ATOM 1 O3' A B2324 60.193 103.801 92.534 1.00 41.20 O
ATOM 2 P U B2325 60.672 103.622 94.051 1.00 42.66 P
ATOM 3 OP1 U B2325 60.578 102.195 94.446 1.00 45.07 O
ATOM 4 OP2 U B2325 59.930 104.640 94.838 1.00 42.72 O
ATOM 5 O5' U B2325 62.213 104.017 94.026 1.00 43.41 O
ATOM 6 C5' U B2325 63.103 103.562 95.057 1.00 43.16 C
ATOM 7 C4' U B2325 64.086 104.651 95.403 1.00 43.83 C
ATOM 8 O4' U B2325 64.874 104.927 94.222 1.00 43.71 O
ATOM 9 C3' U B2325 63.449 105.980 95.800 1.00 42.83 C
ATOM 10 O3' U B2325 64.342 106.687 96.636 1.00 42.43 O
ATOM 11 C2' U B2325 63.335 106.691 94.460 1.00 43.06 C
ATOM 12 O2' U B2325 63.350 108.096 94.492 1.00 43.26 O
ATOM 13 C1' U B2325 64.618 106.243 93.785 1.00 43.56 C
ATOM 14 N1 U B2325 64.472 106.251 92.325 1.00 44.84 N
ATOM 15 C2 U B2325 64.986 107.339 91.671 1.00 45.22 C
ATOM 16 O2 U B2325 65.527 108.269 92.252 1.00 46.21 O
ATOM 17 N3 U B2325 64.828 107.325 90.314 1.00 45.92 N
ATOM 18 C4 U B2325 64.206 106.363 89.554 1.00 46.84 C
ATOM 19 O4 U B2325 64.125 106.526 88.340 1.00 46.83 O
ATOM 20 C5 U B2325 63.683 105.259 90.293 1.00 46.12 C
ATOM 21 C6 U B2325 63.834 105.235 91.624 1.00 45.62 C
ATOM 22 P A B2326 63.953 106.986 98.165 1.00 40.96 P
ATOM 23 OP1 A B2326 63.567 105.707 98.795 1.00 41.23 O
ATOM 24 OP2 A B2326 63.037 108.145 98.231 1.00 41.67 O
ATOM 25 O5' A B2326 65.334 107.467 98.799 1.00 42.48 O
TER
Atoms:
C2: (63.453,114.687,93.894)
OP1: (55.607,117.271,92.154)
OP2: (55.927,114.991,93.246)
C4: (63.176,112.375,93.847)
O5': (57.904,116.472,92.868)
C3': (60.366,117.242,91.082)
C1': (61.965,116.196,92.579)
O4': (60.778,116.502,93.263)
C5': (58.661,117.717,93.023)
P: (56.322,116.393,93.140)
O2: (64.043,115.698,94.309)
C4': (60.112,117.563,92.552)
C2': (61.675,116.431,91.087)
O2': (62.771,117.062,90.451)
N1: (62.394,114.827,92.984)
N3: (63.811,113.450,94.304)
N4: (63.569,111.195,94.310)
C6: (61.759,113.709,92.503)
C5: (62.116,112.471,92.907)
O3': (60.562,118.441,90.331)
OP1: (55.607,117.271,92.154)
OP2: (55.927,114.991,93.246)
C4: (63.176,112.375,93.847)
O5': (57.904,116.472,92.868)
C3': (60.366,117.242,91.082)
C1': (61.965,116.196,92.579)
O4': (60.778,116.502,93.263)
C5': (58.661,117.717,93.023)
P: (56.322,116.393,93.140)
O2: (64.043,115.698,94.309)
C4': (60.112,117.563,92.552)
C2': (61.675,116.431,91.087)
O2': (62.771,117.062,90.451)
N1: (62.394,114.827,92.984)
N3: (63.811,113.450,94.304)
N4: (63.569,111.195,94.310)
C6: (61.759,113.709,92.503)
C5: (62.116,112.471,92.907)
O3': (60.562,118.441,90.331)
C4: (64.206,106.363,89.554)
N3: (64.828,107.325,90.314)
OP1: (60.578,102.195,94.446)
OP2: (59.930,104.640,94.838)
C2: (64.986,107.339,91.671)
C1': (64.618,106.243,93.785)
C3': (63.449,105.980,95.800)
O5': (62.213,104.017,94.026)
O4': (64.874,104.927,94.222)
C5': (63.103,103.562,95.057)
P: (60.672,103.622,94.051)
C4': (64.086,104.651,95.403)
C2': (63.335,106.691,94.460)
O2': (63.350,108.096,94.492)
N1: (64.472,106.251,92.325)
O4: (64.125,106.526,88.340)
O2: (65.527,108.269,92.252)
C6: (63.834,105.235,91.624)
C5: (63.683,105.259,90.293)
O3': (64.342,106.687,96.636)
N3: (64.828,107.325,90.314)
OP1: (60.578,102.195,94.446)
OP2: (59.930,104.640,94.838)
C2: (64.986,107.339,91.671)
C1': (64.618,106.243,93.785)
C3': (63.449,105.980,95.800)
O5': (62.213,104.017,94.026)
O4': (64.874,104.927,94.222)
C5': (63.103,103.562,95.057)
P: (60.672,103.622,94.051)
C4': (64.086,104.651,95.403)
C2': (63.335,106.691,94.460)
O2': (63.350,108.096,94.492)
N1: (64.472,106.251,92.325)
O4: (64.125,106.526,88.340)
O2: (65.527,108.269,92.252)
C6: (63.834,105.235,91.624)
C5: (63.683,105.259,90.293)
O3': (64.342,106.687,96.636)
Image (generated by PyMOL):