Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0271:0355
Extra
PDB:
ATOM 1 O3' C A 270 64.942 101.468 -13.415 1.00133.11 O
ATOM 2 P U A 271 64.101 102.834 -13.576 1.00134.16 P
ATOM 3 OP1 U A 271 62.658 102.491 -13.646 1.00133.57 O
ATOM 4 OP2 U A 271 64.718 103.618 -14.676 1.00134.06 O
ATOM 5 O5' U A 271 64.362 103.611 -12.206 1.00135.72 O
ATOM 6 C5' U A 271 64.771 102.892 -11.021 1.00137.59 C
ATOM 7 C4' U A 271 65.880 103.632 -10.302 1.00138.56 C
ATOM 8 O4' U A 271 66.711 104.318 -11.276 1.00139.18 O
ATOM 9 C3' U A 271 65.435 104.731 -9.355 1.00138.76 C
ATOM 10 O3' U A 271 65.113 104.176 -8.086 1.00138.58 O
ATOM 11 C2' U A 271 66.677 105.611 -9.281 1.00139.00 C
ATOM 12 O2' U A 271 67.668 105.078 -8.421 1.00139.01 O
ATOM 13 C1' U A 271 67.185 105.534 -10.724 1.00138.95 C
ATOM 14 N1 U A 271 66.757 106.643 -11.595 1.00138.44 N
ATOM 15 C2 U A 271 67.746 107.435 -12.159 1.00138.41 C
ATOM 16 O2 U A 271 68.941 107.244 -11.978 1.00138.46 O
ATOM 17 N3 U A 271 67.286 108.460 -12.949 1.00138.51 N
ATOM 18 C4 U A 271 65.972 108.769 -13.230 1.00138.39 C
ATOM 19 O4 U A 271 65.718 109.756 -13.924 1.00138.42 O
ATOM 20 C5 U A 271 65.012 107.900 -12.623 1.00137.91 C
ATOM 21 C6 U A 271 65.424 106.894 -11.846 1.00137.83 C
ATOM 22 P C A 272 63.659 103.534 -7.836 1.00138.79 P
ATOM 23 OP1 C A 272 63.837 102.058 -7.820 1.00139.03 O
ATOM 24 OP2 C A 272 62.686 104.146 -8.776 1.00138.51 O
ATOM 25 O5' C A 272 63.279 104.000 -6.362 1.00137.47 O
TER
ATOM 1 O3' U B 354 73.553 112.858 -9.658 1.00 99.21 O
ATOM 2 P G B 355 73.688 111.675 -10.741 1.00100.39 P
ATOM 3 OP1 G B 355 75.123 111.619 -11.122 1.00100.42 O
ATOM 4 OP2 G B 355 72.653 111.869 -11.792 1.00100.14 O
ATOM 5 O5' G B 355 73.330 110.347 -9.934 1.00100.02 O
ATOM 6 C5' G B 355 73.908 110.086 -8.643 1.00100.66 C
ATOM 7 C4' G B 355 73.028 109.141 -7.858 1.00101.68 C
ATOM 8 O4' G B 355 71.684 109.698 -7.801 1.00101.80 O
ATOM 9 C3' G B 355 72.873 107.732 -8.427 1.00102.51 C
ATOM 10 O3' G B 355 72.680 106.822 -7.347 1.00103.76 O
ATOM 11 C2' G B 355 71.589 107.846 -9.245 1.00102.27 C
ATOM 12 O2' G B 355 70.923 106.611 -9.426 1.00102.40 O
ATOM 13 C1' G B 355 70.763 108.790 -8.373 1.00101.47 C
ATOM 14 N9 G B 355 69.762 109.556 -9.110 1.00100.67 N
ATOM 15 C8 G B 355 69.970 110.355 -10.211 1.00100.95 C
ATOM 16 N7 G B 355 68.875 110.909 -10.656 1.00101.13 N
ATOM 17 C5 G B 355 67.883 110.451 -9.799 1.00100.99 C
ATOM 18 C6 G B 355 66.483 110.711 -9.783 1.00101.35 C
ATOM 19 O6 G B 355 65.818 111.420 -10.553 1.00101.91 O
ATOM 20 N1 G B 355 65.853 110.046 -8.737 1.00100.71 N
ATOM 21 C2 G B 355 66.481 109.236 -7.825 1.00100.14 C
ATOM 22 N2 G B 355 65.696 108.688 -6.887 1.00100.54 N
ATOM 23 N3 G B 355 67.779 108.982 -7.829 1.00 99.74 N
ATOM 24 C4 G B 355 68.415 109.617 -8.836 1.00100.29 C
ATOM 25 P C B 356 73.524 105.452 -7.279 1.00104.28 P
ATOM 26 OP1 C B 356 74.805 105.735 -6.575 1.00103.79 O
ATOM 27 OP2 C B 356 73.550 104.831 -8.628 1.00104.29 O
ATOM 28 O5' C B 356 72.636 104.534 -6.328 1.00104.23 O
TER
ATOM 2 P U A 271 64.101 102.834 -13.576 1.00134.16 P
ATOM 3 OP1 U A 271 62.658 102.491 -13.646 1.00133.57 O
ATOM 4 OP2 U A 271 64.718 103.618 -14.676 1.00134.06 O
ATOM 5 O5' U A 271 64.362 103.611 -12.206 1.00135.72 O
ATOM 6 C5' U A 271 64.771 102.892 -11.021 1.00137.59 C
ATOM 7 C4' U A 271 65.880 103.632 -10.302 1.00138.56 C
ATOM 8 O4' U A 271 66.711 104.318 -11.276 1.00139.18 O
ATOM 9 C3' U A 271 65.435 104.731 -9.355 1.00138.76 C
ATOM 10 O3' U A 271 65.113 104.176 -8.086 1.00138.58 O
ATOM 11 C2' U A 271 66.677 105.611 -9.281 1.00139.00 C
ATOM 12 O2' U A 271 67.668 105.078 -8.421 1.00139.01 O
ATOM 13 C1' U A 271 67.185 105.534 -10.724 1.00138.95 C
ATOM 14 N1 U A 271 66.757 106.643 -11.595 1.00138.44 N
ATOM 15 C2 U A 271 67.746 107.435 -12.159 1.00138.41 C
ATOM 16 O2 U A 271 68.941 107.244 -11.978 1.00138.46 O
ATOM 17 N3 U A 271 67.286 108.460 -12.949 1.00138.51 N
ATOM 18 C4 U A 271 65.972 108.769 -13.230 1.00138.39 C
ATOM 19 O4 U A 271 65.718 109.756 -13.924 1.00138.42 O
ATOM 20 C5 U A 271 65.012 107.900 -12.623 1.00137.91 C
ATOM 21 C6 U A 271 65.424 106.894 -11.846 1.00137.83 C
ATOM 22 P C A 272 63.659 103.534 -7.836 1.00138.79 P
ATOM 23 OP1 C A 272 63.837 102.058 -7.820 1.00139.03 O
ATOM 24 OP2 C A 272 62.686 104.146 -8.776 1.00138.51 O
ATOM 25 O5' C A 272 63.279 104.000 -6.362 1.00137.47 O
TER
ATOM 1 O3' U B 354 73.553 112.858 -9.658 1.00 99.21 O
ATOM 2 P G B 355 73.688 111.675 -10.741 1.00100.39 P
ATOM 3 OP1 G B 355 75.123 111.619 -11.122 1.00100.42 O
ATOM 4 OP2 G B 355 72.653 111.869 -11.792 1.00100.14 O
ATOM 5 O5' G B 355 73.330 110.347 -9.934 1.00100.02 O
ATOM 6 C5' G B 355 73.908 110.086 -8.643 1.00100.66 C
ATOM 7 C4' G B 355 73.028 109.141 -7.858 1.00101.68 C
ATOM 8 O4' G B 355 71.684 109.698 -7.801 1.00101.80 O
ATOM 9 C3' G B 355 72.873 107.732 -8.427 1.00102.51 C
ATOM 10 O3' G B 355 72.680 106.822 -7.347 1.00103.76 O
ATOM 11 C2' G B 355 71.589 107.846 -9.245 1.00102.27 C
ATOM 12 O2' G B 355 70.923 106.611 -9.426 1.00102.40 O
ATOM 13 C1' G B 355 70.763 108.790 -8.373 1.00101.47 C
ATOM 14 N9 G B 355 69.762 109.556 -9.110 1.00100.67 N
ATOM 15 C8 G B 355 69.970 110.355 -10.211 1.00100.95 C
ATOM 16 N7 G B 355 68.875 110.909 -10.656 1.00101.13 N
ATOM 17 C5 G B 355 67.883 110.451 -9.799 1.00100.99 C
ATOM 18 C6 G B 355 66.483 110.711 -9.783 1.00101.35 C
ATOM 19 O6 G B 355 65.818 111.420 -10.553 1.00101.91 O
ATOM 20 N1 G B 355 65.853 110.046 -8.737 1.00100.71 N
ATOM 21 C2 G B 355 66.481 109.236 -7.825 1.00100.14 C
ATOM 22 N2 G B 355 65.696 108.688 -6.887 1.00100.54 N
ATOM 23 N3 G B 355 67.779 108.982 -7.829 1.00 99.74 N
ATOM 24 C4 G B 355 68.415 109.617 -8.836 1.00100.29 C
ATOM 25 P C B 356 73.524 105.452 -7.279 1.00104.28 P
ATOM 26 OP1 C B 356 74.805 105.735 -6.575 1.00103.79 O
ATOM 27 OP2 C B 356 73.550 104.831 -8.628 1.00104.29 O
ATOM 28 O5' C B 356 72.636 104.534 -6.328 1.00104.23 O
TER
Atoms:
C4: (65.972,108.769,-13.230)
N3: (67.286,108.460,-12.949)
OP1: (62.658,102.491,-13.646)
OP2: (64.718,103.618,-14.676)
C2: (67.746,107.435,-12.159)
C1': (67.185,105.534,-10.724)
C3': (65.435,104.731,-9.355)
O5': (64.362,103.611,-12.206)
O4': (66.711,104.318,-11.276)
C5': (64.771,102.892,-11.021)
P: (64.101,102.834,-13.576)
C4': (65.880,103.632,-10.302)
C2': (66.677,105.611,-9.281)
O2': (67.668,105.078,-8.421)
N1: (66.757,106.643,-11.595)
O4: (65.718,109.756,-13.924)
O2: (68.941,107.244,-11.978)
C6: (65.424,106.894,-11.846)
C5: (65.012,107.900,-12.623)
O3': (65.113,104.176,-8.086)
N3: (67.286,108.460,-12.949)
OP1: (62.658,102.491,-13.646)
OP2: (64.718,103.618,-14.676)
C2: (67.746,107.435,-12.159)
C1': (67.185,105.534,-10.724)
C3': (65.435,104.731,-9.355)
O5': (64.362,103.611,-12.206)
O4': (66.711,104.318,-11.276)
C5': (64.771,102.892,-11.021)
P: (64.101,102.834,-13.576)
C4': (65.880,103.632,-10.302)
C2': (66.677,105.611,-9.281)
O2': (67.668,105.078,-8.421)
N1: (66.757,106.643,-11.595)
O4: (65.718,109.756,-13.924)
O2: (68.941,107.244,-11.978)
C6: (65.424,106.894,-11.846)
C5: (65.012,107.900,-12.623)
O3': (65.113,104.176,-8.086)
OP1: (75.123,111.619,-11.122)
OP2: (72.653,111.869,-11.792)
C3': (72.873,107.732,-8.427)
C1': (70.763,108.790,-8.373)
C5': (73.908,110.086,-8.643)
O6: (65.818,111.420,-10.553)
O4': (71.684,109.698,-7.801)
C8: (69.970,110.355,-10.211)
C2: (66.481,109.236,-7.825)
C6: (66.483,110.711,-9.783)
C5: (67.883,110.451,-9.799)
C4: (68.415,109.617,-8.836)
P: (73.688,111.675,-10.741)
C4': (73.028,109.141,-7.858)
C2': (71.589,107.846,-9.245)
O2': (70.923,106.611,-9.426)
N1: (65.853,110.046,-8.737)
N2: (65.696,108.688,-6.887)
N3: (67.779,108.982,-7.829)
N7: (68.875,110.909,-10.656)
N9: (69.762,109.556,-9.110)
O5': (73.330,110.347,-9.934)
O3': (72.680,106.822,-7.347)
OP2: (72.653,111.869,-11.792)
C3': (72.873,107.732,-8.427)
C1': (70.763,108.790,-8.373)
C5': (73.908,110.086,-8.643)
O6: (65.818,111.420,-10.553)
O4': (71.684,109.698,-7.801)
C8: (69.970,110.355,-10.211)
C2: (66.481,109.236,-7.825)
C6: (66.483,110.711,-9.783)
C5: (67.883,110.451,-9.799)
C4: (68.415,109.617,-8.836)
P: (73.688,111.675,-10.741)
C4': (73.028,109.141,-7.858)
C2': (71.589,107.846,-9.245)
O2': (70.923,106.611,-9.426)
N1: (65.853,110.046,-8.737)
N2: (65.696,108.688,-6.887)
N3: (67.779,108.982,-7.829)
N7: (68.875,110.909,-10.656)
N9: (69.762,109.556,-9.110)
O5': (73.330,110.347,-9.934)
O3': (72.680,106.822,-7.347)
Image (generated by PyMOL):