Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:B18:B16
Extra
PDB:
ATOM 1 O3' U A 17 -5.126 -42.851 31.828 1.00 39.38 O
ATOM 2 P U A 18 -4.441 -41.901 30.738 1.00 39.53 P
ATOM 3 OP1 U A 18 -3.840 -42.791 29.713 1.00 40.24 O
ATOM 4 OP2 U A 18 -3.578 -40.943 31.465 1.00 40.96 O
ATOM 5 O5' U A 18 -5.654 -41.060 30.131 1.00 38.86 O
ATOM 6 C5' U A 18 -6.152 -41.298 28.797 1.00 38.96 C
ATOM 7 C4' U A 18 -7.018 -40.142 28.358 1.00 39.29 C
ATOM 8 O4' U A 18 -8.075 -39.974 29.333 1.00 39.75 O
ATOM 9 C3' U A 18 -6.301 -38.796 28.273 1.00 39.32 C
ATOM 10 O3' U A 18 -6.907 -37.949 27.280 1.00 39.27 O
ATOM 11 C2' U A 18 -6.593 -38.176 29.637 1.00 39.04 C
ATOM 12 O2' U A 18 -6.582 -36.766 29.622 1.00 40.71 O
ATOM 13 C1' U A 18 -8.006 -38.688 29.908 1.00 38.75 C
ATOM 14 N1 U A 18 -8.389 -38.820 31.322 1.00 37.38 N
ATOM 15 C2 U A 18 -9.715 -38.560 31.657 1.00 37.01 C
ATOM 16 O2 U A 18 -10.545 -38.152 30.855 1.00 36.33 O
ATOM 17 N3 U A 18 -10.032 -38.789 32.972 1.00 36.43 N
ATOM 18 C4 U A 18 -9.180 -39.222 33.969 1.00 36.90 C
ATOM 19 O4 U A 18 -9.629 -39.445 35.095 1.00 36.85 O
ATOM 20 C5 U A 18 -7.822 -39.422 33.553 1.00 36.50 C
ATOM 21 C6 U A 18 -7.482 -39.219 32.278 1.00 37.16 C
ATOM 22 P C A 19 -7.329 -38.538 25.839 1.00 38.41 P
ATOM 23 OP1 C A 19 -6.387 -39.628 25.472 1.00 39.05 O
ATOM 24 OP2 C A 19 -7.515 -37.395 24.917 1.00 37.83 O
ATOM 25 O5' C A 19 -8.774 -39.158 26.108 1.00 37.98 O
TER
ATOM 1 O3' U B 15 -1.037 -35.900 35.843 1.00 33.44 O
ATOM 2 P G B 16 -1.326 -37.296 35.100 1.00 35.16 P
ATOM 3 OP1 G B 16 -0.139 -38.171 35.287 1.00 35.52 O
ATOM 4 OP2 G B 16 -1.782 -36.978 33.719 1.00 35.71 O
ATOM 5 O5' G B 16 -2.584 -37.889 35.887 1.00 35.15 O
ATOM 6 C5' G B 16 -2.498 -38.150 37.299 1.00 36.40 C
ATOM 7 C4' G B 16 -3.868 -38.119 37.948 1.00 36.62 C
ATOM 8 O4' G B 16 -4.532 -36.868 37.642 1.00 36.12 O
ATOM 9 C3' G B 16 -4.876 -39.190 37.560 1.00 36.73 C
ATOM 10 O3' G B 16 -4.685 -40.375 38.326 1.00 38.15 O
ATOM 11 C2' G B 16 -6.203 -38.539 37.932 1.00 35.94 C
ATOM 12 O2' G B 16 -6.495 -38.681 39.307 1.00 35.57 O
ATOM 13 C1' G B 16 -5.934 -37.066 37.621 1.00 34.86 C
ATOM 14 N9 G B 16 -6.436 -36.672 36.309 1.00 33.27 N
ATOM 15 C8 G B 16 -5.701 -36.451 35.169 1.00 32.51 C
ATOM 16 N7 G B 16 -6.438 -36.139 34.138 1.00 31.92 N
ATOM 17 C5 G B 16 -7.737 -36.145 34.628 1.00 31.36 C
ATOM 18 C6 G B 16 -8.972 -35.898 33.968 1.00 31.97 C
ATOM 19 O6 G B 16 -9.173 -35.610 32.779 1.00 31.71 O
ATOM 20 N1 G B 16 -10.048 -36.027 34.840 1.00 31.82 N
ATOM 21 C2 G B 16 -9.952 -36.352 36.168 1.00 30.88 C
ATOM 22 N2 G B 16 -11.104 -36.434 36.834 1.00 31.40 N
ATOM 23 N3 G B 16 -8.814 -36.581 36.792 1.00 30.59 N
ATOM 24 C4 G B 16 -7.753 -36.464 35.968 1.00 31.64 C
ATOM 25 P U B 17 -5.268 -41.774 37.791 1.00 39.27 P
ATOM 26 OP1 U B 17 -6.668 -41.539 37.355 1.00 39.37 O
ATOM 27 OP2 U B 17 -4.988 -42.816 38.816 1.00 39.17 O
ATOM 28 O5' U B 17 -4.369 -42.100 36.513 1.00 39.45 O
TER
ATOM 2 P U A 18 -4.441 -41.901 30.738 1.00 39.53 P
ATOM 3 OP1 U A 18 -3.840 -42.791 29.713 1.00 40.24 O
ATOM 4 OP2 U A 18 -3.578 -40.943 31.465 1.00 40.96 O
ATOM 5 O5' U A 18 -5.654 -41.060 30.131 1.00 38.86 O
ATOM 6 C5' U A 18 -6.152 -41.298 28.797 1.00 38.96 C
ATOM 7 C4' U A 18 -7.018 -40.142 28.358 1.00 39.29 C
ATOM 8 O4' U A 18 -8.075 -39.974 29.333 1.00 39.75 O
ATOM 9 C3' U A 18 -6.301 -38.796 28.273 1.00 39.32 C
ATOM 10 O3' U A 18 -6.907 -37.949 27.280 1.00 39.27 O
ATOM 11 C2' U A 18 -6.593 -38.176 29.637 1.00 39.04 C
ATOM 12 O2' U A 18 -6.582 -36.766 29.622 1.00 40.71 O
ATOM 13 C1' U A 18 -8.006 -38.688 29.908 1.00 38.75 C
ATOM 14 N1 U A 18 -8.389 -38.820 31.322 1.00 37.38 N
ATOM 15 C2 U A 18 -9.715 -38.560 31.657 1.00 37.01 C
ATOM 16 O2 U A 18 -10.545 -38.152 30.855 1.00 36.33 O
ATOM 17 N3 U A 18 -10.032 -38.789 32.972 1.00 36.43 N
ATOM 18 C4 U A 18 -9.180 -39.222 33.969 1.00 36.90 C
ATOM 19 O4 U A 18 -9.629 -39.445 35.095 1.00 36.85 O
ATOM 20 C5 U A 18 -7.822 -39.422 33.553 1.00 36.50 C
ATOM 21 C6 U A 18 -7.482 -39.219 32.278 1.00 37.16 C
ATOM 22 P C A 19 -7.329 -38.538 25.839 1.00 38.41 P
ATOM 23 OP1 C A 19 -6.387 -39.628 25.472 1.00 39.05 O
ATOM 24 OP2 C A 19 -7.515 -37.395 24.917 1.00 37.83 O
ATOM 25 O5' C A 19 -8.774 -39.158 26.108 1.00 37.98 O
TER
ATOM 1 O3' U B 15 -1.037 -35.900 35.843 1.00 33.44 O
ATOM 2 P G B 16 -1.326 -37.296 35.100 1.00 35.16 P
ATOM 3 OP1 G B 16 -0.139 -38.171 35.287 1.00 35.52 O
ATOM 4 OP2 G B 16 -1.782 -36.978 33.719 1.00 35.71 O
ATOM 5 O5' G B 16 -2.584 -37.889 35.887 1.00 35.15 O
ATOM 6 C5' G B 16 -2.498 -38.150 37.299 1.00 36.40 C
ATOM 7 C4' G B 16 -3.868 -38.119 37.948 1.00 36.62 C
ATOM 8 O4' G B 16 -4.532 -36.868 37.642 1.00 36.12 O
ATOM 9 C3' G B 16 -4.876 -39.190 37.560 1.00 36.73 C
ATOM 10 O3' G B 16 -4.685 -40.375 38.326 1.00 38.15 O
ATOM 11 C2' G B 16 -6.203 -38.539 37.932 1.00 35.94 C
ATOM 12 O2' G B 16 -6.495 -38.681 39.307 1.00 35.57 O
ATOM 13 C1' G B 16 -5.934 -37.066 37.621 1.00 34.86 C
ATOM 14 N9 G B 16 -6.436 -36.672 36.309 1.00 33.27 N
ATOM 15 C8 G B 16 -5.701 -36.451 35.169 1.00 32.51 C
ATOM 16 N7 G B 16 -6.438 -36.139 34.138 1.00 31.92 N
ATOM 17 C5 G B 16 -7.737 -36.145 34.628 1.00 31.36 C
ATOM 18 C6 G B 16 -8.972 -35.898 33.968 1.00 31.97 C
ATOM 19 O6 G B 16 -9.173 -35.610 32.779 1.00 31.71 O
ATOM 20 N1 G B 16 -10.048 -36.027 34.840 1.00 31.82 N
ATOM 21 C2 G B 16 -9.952 -36.352 36.168 1.00 30.88 C
ATOM 22 N2 G B 16 -11.104 -36.434 36.834 1.00 31.40 N
ATOM 23 N3 G B 16 -8.814 -36.581 36.792 1.00 30.59 N
ATOM 24 C4 G B 16 -7.753 -36.464 35.968 1.00 31.64 C
ATOM 25 P U B 17 -5.268 -41.774 37.791 1.00 39.27 P
ATOM 26 OP1 U B 17 -6.668 -41.539 37.355 1.00 39.37 O
ATOM 27 OP2 U B 17 -4.988 -42.816 38.816 1.00 39.17 O
ATOM 28 O5' U B 17 -4.369 -42.100 36.513 1.00 39.45 O
TER
Atoms:
C4: (-9.180,-39.222,33.969)
N3: (-10.032,-38.789,32.972)
OP1: (-3.840,-42.791,29.713)
OP2: (-3.578,-40.943,31.465)
C2: (-9.715,-38.560,31.657)
C1': (-8.006,-38.688,29.908)
C3': (-6.301,-38.796,28.273)
O5': (-5.654,-41.060,30.131)
O4': (-8.075,-39.974,29.333)
C5': (-6.152,-41.298,28.797)
P: (-4.441,-41.901,30.738)
C4': (-7.018,-40.142,28.358)
C2': (-6.593,-38.176,29.637)
O2': (-6.582,-36.766,29.622)
N1: (-8.389,-38.820,31.322)
O4: (-9.629,-39.445,35.095)
O2: (-10.545,-38.152,30.855)
C6: (-7.482,-39.219,32.278)
C5: (-7.822,-39.422,33.553)
O3': (-6.907,-37.949,27.280)
N3: (-10.032,-38.789,32.972)
OP1: (-3.840,-42.791,29.713)
OP2: (-3.578,-40.943,31.465)
C2: (-9.715,-38.560,31.657)
C1': (-8.006,-38.688,29.908)
C3': (-6.301,-38.796,28.273)
O5': (-5.654,-41.060,30.131)
O4': (-8.075,-39.974,29.333)
C5': (-6.152,-41.298,28.797)
P: (-4.441,-41.901,30.738)
C4': (-7.018,-40.142,28.358)
C2': (-6.593,-38.176,29.637)
O2': (-6.582,-36.766,29.622)
N1: (-8.389,-38.820,31.322)
O4: (-9.629,-39.445,35.095)
O2: (-10.545,-38.152,30.855)
C6: (-7.482,-39.219,32.278)
C5: (-7.822,-39.422,33.553)
O3': (-6.907,-37.949,27.280)
OP1: (-0.139,-38.171,35.287)
OP2: (-1.782,-36.978,33.719)
C3': (-4.876,-39.190,37.560)
C1': (-5.934,-37.066,37.621)
C5': (-2.498,-38.150,37.299)
O6: (-9.173,-35.610,32.779)
O4': (-4.532,-36.868,37.642)
C8: (-5.701,-36.451,35.169)
C2: (-9.952,-36.352,36.168)
C6: (-8.972,-35.898,33.968)
C5: (-7.737,-36.145,34.628)
C4: (-7.753,-36.464,35.968)
P: (-1.326,-37.296,35.100)
C4': (-3.868,-38.119,37.948)
C2': (-6.203,-38.539,37.932)
O2': (-6.495,-38.681,39.307)
N1: (-10.048,-36.027,34.840)
N2: (-11.104,-36.434,36.834)
N3: (-8.814,-36.581,36.792)
N7: (-6.438,-36.139,34.138)
N9: (-6.436,-36.672,36.309)
O5': (-2.584,-37.889,35.887)
O3': (-4.685,-40.375,38.326)
OP2: (-1.782,-36.978,33.719)
C3': (-4.876,-39.190,37.560)
C1': (-5.934,-37.066,37.621)
C5': (-2.498,-38.150,37.299)
O6: (-9.173,-35.610,32.779)
O4': (-4.532,-36.868,37.642)
C8: (-5.701,-36.451,35.169)
C2: (-9.952,-36.352,36.168)
C6: (-8.972,-35.898,33.968)
C5: (-7.737,-36.145,34.628)
C4: (-7.753,-36.464,35.968)
P: (-1.326,-37.296,35.100)
C4': (-3.868,-38.119,37.948)
C2': (-6.203,-38.539,37.932)
O2': (-6.495,-38.681,39.307)
N1: (-10.048,-36.027,34.840)
N2: (-11.104,-36.434,36.834)
N3: (-8.814,-36.581,36.792)
N7: (-6.438,-36.139,34.138)
N9: (-6.436,-36.672,36.309)
O5': (-2.584,-37.889,35.887)
O3': (-4.685,-40.375,38.326)
Image (generated by PyMOL):