Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NTB:B6:A16
Extra
PDB:
ATOM 1 O3' C A 5 6.981 38.736 11.292 1.00 58.35 O
ATOM 2 P C A 6 6.488 39.261 9.874 1.00 56.73 P
ATOM 3 OP1 C A 6 7.711 39.301 9.043 1.00 58.13 O
ATOM 4 OP2 C A 6 5.647 40.471 10.000 1.00 56.76 O
ATOM 5 O5' C A 6 5.563 38.072 9.372 1.00 55.58 O
ATOM 6 C5' C A 6 4.764 38.276 8.215 1.00 53.50 C
ATOM 7 C4' C A 6 5.599 38.525 6.962 1.00 51.10 C
ATOM 8 O4' C A 6 5.855 37.304 6.243 1.00 49.20 O
ATOM 9 C3' C A 6 4.905 39.338 5.915 1.00 49.56 C
ATOM 10 O3' C A 6 5.856 39.692 4.963 1.00 48.03 O
ATOM 11 C2' C A 6 3.889 38.331 5.392 1.00 48.83 C
ATOM 12 O2' C A 6 3.398 38.670 4.098 1.00 48.51 O
ATOM 13 C1' C A 6 4.743 37.050 5.391 1.00 48.32 C
ATOM 14 N1 C A 6 4.043 35.791 5.865 1.00 47.45 N
ATOM 15 C2 C A 6 2.885 35.362 5.223 1.00 47.10 C
ATOM 16 O2 C A 6 2.428 36.030 4.294 1.00 48.07 O
ATOM 17 N3 C A 6 2.283 34.221 5.640 1.00 46.85 N
ATOM 18 C4 C A 6 2.795 33.508 6.639 1.00 46.79 C
ATOM 19 N4 C A 6 2.156 32.388 7.003 1.00 47.12 N
ATOM 20 C5 C A 6 3.984 33.914 7.307 1.00 46.93 C
ATOM 21 C6 C A 6 4.570 35.044 6.893 1.00 47.36 C
ATOM 22 P A A 7 6.045 41.132 4.270 1.00 47.21 P
ATOM 23 OP1 A A 7 5.851 42.229 5.235 1.00 46.78 O
ATOM 24 OP2 A A 7 5.240 41.053 3.024 1.00 44.15 O
ATOM 25 O5' A A 7 7.631 40.904 3.953 1.00 49.27 O
TER
ATOM 1 O3' U B 15 0.794 27.786 1.982 1.00 54.88 O
ATOM 2 P U B 16 -0.102 27.876 3.327 1.00 58.12 P
ATOM 3 OP1 U B 16 -0.907 26.634 3.411 1.00 58.09 O
ATOM 4 OP2 U B 16 -0.765 29.203 3.244 1.00 57.43 O
ATOM 5 O5' U B 16 0.930 27.869 4.551 1.00 55.73 O
ATOM 6 C5' U B 16 1.501 26.642 4.954 1.00 55.73 C
ATOM 7 C4' U B 16 2.817 26.844 5.691 1.00 56.00 C
ATOM 8 O4' U B 16 3.676 27.733 4.931 1.00 55.47 O
ATOM 9 C3' U B 16 2.705 27.493 7.072 1.00 56.63 C
ATOM 10 O3' U B 16 3.749 27.051 7.945 1.00 57.68 O
ATOM 11 C2' U B 16 2.821 28.974 6.735 1.00 56.03 C
ATOM 12 O2' U B 16 3.184 29.782 7.840 1.00 56.93 O
ATOM 13 C1' U B 16 3.923 28.915 5.684 1.00 54.45 C
ATOM 14 N1 U B 16 3.965 30.098 4.764 1.00 50.41 N
ATOM 15 C2 U B 16 4.991 31.020 4.876 1.00 48.76 C
ATOM 16 O2 U B 16 5.887 30.938 5.691 1.00 46.32 O
ATOM 17 N3 U B 16 4.936 32.057 3.981 1.00 48.67 N
ATOM 18 C4 U B 16 3.984 32.258 3.007 1.00 49.02 C
ATOM 19 O4 U B 16 4.065 33.239 2.276 1.00 50.21 O
ATOM 20 C5 U B 16 2.947 31.259 2.949 1.00 48.99 C
ATOM 21 C6 U B 16 2.980 30.243 3.814 1.00 49.40 C
ATOM 22 P C B 17 3.676 25.529 8.526 1.00 56.21 P
ATOM 23 OP1 C B 17 2.243 25.163 8.669 1.00 55.40 O
ATOM 24 OP2 C B 17 4.629 25.376 9.672 1.00 54.09 O
ATOM 25 O5' C B 17 4.290 24.718 7.297 1.00 55.11 O
TER
ATOM 2 P C A 6 6.488 39.261 9.874 1.00 56.73 P
ATOM 3 OP1 C A 6 7.711 39.301 9.043 1.00 58.13 O
ATOM 4 OP2 C A 6 5.647 40.471 10.000 1.00 56.76 O
ATOM 5 O5' C A 6 5.563 38.072 9.372 1.00 55.58 O
ATOM 6 C5' C A 6 4.764 38.276 8.215 1.00 53.50 C
ATOM 7 C4' C A 6 5.599 38.525 6.962 1.00 51.10 C
ATOM 8 O4' C A 6 5.855 37.304 6.243 1.00 49.20 O
ATOM 9 C3' C A 6 4.905 39.338 5.915 1.00 49.56 C
ATOM 10 O3' C A 6 5.856 39.692 4.963 1.00 48.03 O
ATOM 11 C2' C A 6 3.889 38.331 5.392 1.00 48.83 C
ATOM 12 O2' C A 6 3.398 38.670 4.098 1.00 48.51 O
ATOM 13 C1' C A 6 4.743 37.050 5.391 1.00 48.32 C
ATOM 14 N1 C A 6 4.043 35.791 5.865 1.00 47.45 N
ATOM 15 C2 C A 6 2.885 35.362 5.223 1.00 47.10 C
ATOM 16 O2 C A 6 2.428 36.030 4.294 1.00 48.07 O
ATOM 17 N3 C A 6 2.283 34.221 5.640 1.00 46.85 N
ATOM 18 C4 C A 6 2.795 33.508 6.639 1.00 46.79 C
ATOM 19 N4 C A 6 2.156 32.388 7.003 1.00 47.12 N
ATOM 20 C5 C A 6 3.984 33.914 7.307 1.00 46.93 C
ATOM 21 C6 C A 6 4.570 35.044 6.893 1.00 47.36 C
ATOM 22 P A A 7 6.045 41.132 4.270 1.00 47.21 P
ATOM 23 OP1 A A 7 5.851 42.229 5.235 1.00 46.78 O
ATOM 24 OP2 A A 7 5.240 41.053 3.024 1.00 44.15 O
ATOM 25 O5' A A 7 7.631 40.904 3.953 1.00 49.27 O
TER
ATOM 1 O3' U B 15 0.794 27.786 1.982 1.00 54.88 O
ATOM 2 P U B 16 -0.102 27.876 3.327 1.00 58.12 P
ATOM 3 OP1 U B 16 -0.907 26.634 3.411 1.00 58.09 O
ATOM 4 OP2 U B 16 -0.765 29.203 3.244 1.00 57.43 O
ATOM 5 O5' U B 16 0.930 27.869 4.551 1.00 55.73 O
ATOM 6 C5' U B 16 1.501 26.642 4.954 1.00 55.73 C
ATOM 7 C4' U B 16 2.817 26.844 5.691 1.00 56.00 C
ATOM 8 O4' U B 16 3.676 27.733 4.931 1.00 55.47 O
ATOM 9 C3' U B 16 2.705 27.493 7.072 1.00 56.63 C
ATOM 10 O3' U B 16 3.749 27.051 7.945 1.00 57.68 O
ATOM 11 C2' U B 16 2.821 28.974 6.735 1.00 56.03 C
ATOM 12 O2' U B 16 3.184 29.782 7.840 1.00 56.93 O
ATOM 13 C1' U B 16 3.923 28.915 5.684 1.00 54.45 C
ATOM 14 N1 U B 16 3.965 30.098 4.764 1.00 50.41 N
ATOM 15 C2 U B 16 4.991 31.020 4.876 1.00 48.76 C
ATOM 16 O2 U B 16 5.887 30.938 5.691 1.00 46.32 O
ATOM 17 N3 U B 16 4.936 32.057 3.981 1.00 48.67 N
ATOM 18 C4 U B 16 3.984 32.258 3.007 1.00 49.02 C
ATOM 19 O4 U B 16 4.065 33.239 2.276 1.00 50.21 O
ATOM 20 C5 U B 16 2.947 31.259 2.949 1.00 48.99 C
ATOM 21 C6 U B 16 2.980 30.243 3.814 1.00 49.40 C
ATOM 22 P C B 17 3.676 25.529 8.526 1.00 56.21 P
ATOM 23 OP1 C B 17 2.243 25.163 8.669 1.00 55.40 O
ATOM 24 OP2 C B 17 4.629 25.376 9.672 1.00 54.09 O
ATOM 25 O5' C B 17 4.290 24.718 7.297 1.00 55.11 O
TER
Atoms:
C2: (2.885,35.362,5.223)
OP1: (7.711,39.301,9.043)
OP2: (5.647,40.471,10.000)
C4: (2.795,33.508,6.639)
O5': (5.563,38.072,9.372)
C3': (4.905,39.338,5.915)
C1': (4.743,37.050,5.391)
O4': (5.855,37.304,6.243)
C5': (4.764,38.276,8.215)
P: (6.488,39.261,9.874)
O2: (2.428,36.030,4.294)
C4': (5.599,38.525,6.962)
C2': (3.889,38.331,5.392)
O2': (3.398,38.670,4.098)
N1: (4.043,35.791,5.865)
N3: (2.283,34.221,5.640)
N4: (2.156,32.388,7.003)
C6: (4.570,35.044,6.893)
C5: (3.984,33.914,7.307)
O3': (5.856,39.692,4.963)
OP1: (7.711,39.301,9.043)
OP2: (5.647,40.471,10.000)
C4: (2.795,33.508,6.639)
O5': (5.563,38.072,9.372)
C3': (4.905,39.338,5.915)
C1': (4.743,37.050,5.391)
O4': (5.855,37.304,6.243)
C5': (4.764,38.276,8.215)
P: (6.488,39.261,9.874)
O2: (2.428,36.030,4.294)
C4': (5.599,38.525,6.962)
C2': (3.889,38.331,5.392)
O2': (3.398,38.670,4.098)
N1: (4.043,35.791,5.865)
N3: (2.283,34.221,5.640)
N4: (2.156,32.388,7.003)
C6: (4.570,35.044,6.893)
C5: (3.984,33.914,7.307)
O3': (5.856,39.692,4.963)
C4: (3.984,32.258,3.007)
N3: (4.936,32.057,3.981)
OP1: (-0.907,26.634,3.411)
OP2: (-0.765,29.203,3.244)
C2: (4.991,31.020,4.876)
C1': (3.923,28.915,5.684)
C3': (2.705,27.493,7.072)
O5': (0.930,27.869,4.551)
O4': (3.676,27.733,4.931)
C5': (1.501,26.642,4.954)
P: (-0.102,27.876,3.327)
C4': (2.817,26.844,5.691)
C2': (2.821,28.974,6.735)
O2': (3.184,29.782,7.840)
N1: (3.965,30.098,4.764)
O4: (4.065,33.239,2.276)
O2: (5.887,30.938,5.691)
C6: (2.980,30.243,3.814)
C5: (2.947,31.259,2.949)
O3': (3.749,27.051,7.945)
N3: (4.936,32.057,3.981)
OP1: (-0.907,26.634,3.411)
OP2: (-0.765,29.203,3.244)
C2: (4.991,31.020,4.876)
C1': (3.923,28.915,5.684)
C3': (2.705,27.493,7.072)
O5': (0.930,27.869,4.551)
O4': (3.676,27.733,4.931)
C5': (1.501,26.642,4.954)
P: (-0.102,27.876,3.327)
C4': (2.817,26.844,5.691)
C2': (2.821,28.974,6.735)
O2': (3.184,29.782,7.840)
N1: (3.965,30.098,4.764)
O4: (4.065,33.239,2.276)
O2: (5.887,30.938,5.691)
C6: (2.980,30.243,3.814)
C5: (2.947,31.259,2.949)
O3': (3.749,27.051,7.945)
Image (generated by PyMOL):