Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3F1H:A56:A53
Extra
PDB:
ATOM 1 O3' C A 55 -19.739 -80.541 36.963 1.00 61.37 O
ATOM 2 P U A 56 -20.474 -79.123 37.148 1.00 63.04 P
ATOM 3 OP1 U A 56 -20.599 -78.583 35.769 1.00 69.18 O
ATOM 4 OP2 U A 56 -19.854 -78.328 38.252 1.00 58.69 O
ATOM 5 O5' U A 56 -21.919 -79.524 37.694 1.00 71.35 O
ATOM 6 C5' U A 56 -22.941 -79.922 36.801 1.00 75.28 C
ATOM 7 C4' U A 56 -24.296 -79.745 37.463 1.00 66.94 C
ATOM 8 O4' U A 56 -24.512 -80.766 38.478 1.00 66.86 O
ATOM 9 C3' U A 56 -24.487 -78.401 38.162 1.00 62.68 C
ATOM 10 O3' U A 56 -25.725 -77.829 37.763 1.00 74.96 O
ATOM 11 C2' U A 56 -24.519 -78.770 39.644 1.00 63.80 C
ATOM 12 O2' U A 56 -25.313 -77.876 40.404 1.00 71.12 O
ATOM 13 C1' U A 56 -25.170 -80.149 39.566 1.00 62.65 C
ATOM 14 N1 U A 56 -25.060 -80.983 40.809 1.00 57.19 N
ATOM 15 C2 U A 56 -26.151 -81.711 41.229 1.00 64.71 C
ATOM 16 O2 U A 56 -27.209 -81.724 40.635 1.00 72.58 O
ATOM 17 N3 U A 56 -25.971 -82.439 42.373 1.00 66.77 N
ATOM 18 C4 U A 56 -24.825 -82.510 43.132 1.00 73.56 C
ATOM 19 O4 U A 56 -24.811 -83.209 44.141 1.00 81.59 O
ATOM 20 C5 U A 56 -23.726 -81.726 42.634 1.00 73.53 C
ATOM 21 C6 U A 56 -23.883 -81.006 41.518 1.00 66.66 C
ATOM 22 P A A 57 -25.845 -76.701 36.628 1.00 82.23 P
ATOM 23 OP1 A A 57 -24.730 -76.854 35.658 1.00 79.94 O
ATOM 24 OP2 A A 57 -26.080 -75.424 37.351 1.00 65.83 O
ATOM 25 O5' A A 57 -27.195 -77.104 35.872 1.00 59.89 O
TER
ATOM 1 O3' U B 52 -20.449 -74.175 46.814 1.00 61.17 O
ATOM 2 P G B 53 -19.868 -75.286 45.788 1.00 49.49 P
ATOM 3 OP1 G B 53 -18.442 -75.509 46.143 1.00 55.78 O
ATOM 4 OP2 G B 53 -20.231 -74.935 44.400 1.00 50.49 O
ATOM 5 O5' G B 53 -20.735 -76.556 46.192 1.00 53.43 O
ATOM 6 C5' G B 53 -20.610 -77.094 47.499 1.00 61.27 C
ATOM 7 C4' G B 53 -20.713 -78.603 47.407 1.00 59.16 C
ATOM 8 O4' G B 53 -22.045 -78.958 46.971 1.00 57.37 O
ATOM 9 C3' G B 53 -19.769 -79.262 46.407 1.00 60.53 C
ATOM 10 O3' G B 53 -19.337 -80.498 46.938 1.00 73.46 O
ATOM 11 C2' G B 53 -20.650 -79.488 45.189 1.00 62.33 C
ATOM 12 O2' G B 53 -20.184 -80.576 44.414 1.00 70.56 O
ATOM 13 C1' G B 53 -21.963 -79.843 45.880 1.00 64.75 C
ATOM 14 N9 G B 53 -23.171 -79.648 45.081 1.00 71.41 N
ATOM 15 C8 G B 53 -23.299 -78.962 43.896 1.00 65.99 C
ATOM 16 N7 G B 53 -24.514 -78.962 43.421 1.00 58.40 N
ATOM 17 C5 G B 53 -25.233 -79.683 44.359 1.00 55.29 C
ATOM 18 C6 G B 53 -26.595 -80.009 44.380 1.00 56.04 C
ATOM 19 O6 G B 53 -27.445 -79.702 43.540 1.00 62.39 O
ATOM 20 N1 G B 53 -26.930 -80.751 45.509 1.00 59.29 N
ATOM 21 C2 G B 53 -26.051 -81.135 46.492 1.00 60.53 C
ATOM 22 N2 G B 53 -26.552 -81.855 47.509 1.00 61.32 N
ATOM 23 N3 G B 53 -24.761 -80.836 46.478 1.00 61.06 N
ATOM 24 C4 G B 53 -24.429 -80.110 45.385 1.00 60.74 C
ATOM 25 P G B 54 -17.781 -80.794 47.019 1.00 53.78 P
ATOM 26 OP1 G B 54 -17.603 -82.229 47.343 1.00 57.87 O
ATOM 27 OP2 G B 54 -17.170 -79.759 47.894 1.00 43.01 O
ATOM 28 O5' G B 54 -17.335 -80.577 45.503 1.00 43.88 O
TER
ATOM 2 P U A 56 -20.474 -79.123 37.148 1.00 63.04 P
ATOM 3 OP1 U A 56 -20.599 -78.583 35.769 1.00 69.18 O
ATOM 4 OP2 U A 56 -19.854 -78.328 38.252 1.00 58.69 O
ATOM 5 O5' U A 56 -21.919 -79.524 37.694 1.00 71.35 O
ATOM 6 C5' U A 56 -22.941 -79.922 36.801 1.00 75.28 C
ATOM 7 C4' U A 56 -24.296 -79.745 37.463 1.00 66.94 C
ATOM 8 O4' U A 56 -24.512 -80.766 38.478 1.00 66.86 O
ATOM 9 C3' U A 56 -24.487 -78.401 38.162 1.00 62.68 C
ATOM 10 O3' U A 56 -25.725 -77.829 37.763 1.00 74.96 O
ATOM 11 C2' U A 56 -24.519 -78.770 39.644 1.00 63.80 C
ATOM 12 O2' U A 56 -25.313 -77.876 40.404 1.00 71.12 O
ATOM 13 C1' U A 56 -25.170 -80.149 39.566 1.00 62.65 C
ATOM 14 N1 U A 56 -25.060 -80.983 40.809 1.00 57.19 N
ATOM 15 C2 U A 56 -26.151 -81.711 41.229 1.00 64.71 C
ATOM 16 O2 U A 56 -27.209 -81.724 40.635 1.00 72.58 O
ATOM 17 N3 U A 56 -25.971 -82.439 42.373 1.00 66.77 N
ATOM 18 C4 U A 56 -24.825 -82.510 43.132 1.00 73.56 C
ATOM 19 O4 U A 56 -24.811 -83.209 44.141 1.00 81.59 O
ATOM 20 C5 U A 56 -23.726 -81.726 42.634 1.00 73.53 C
ATOM 21 C6 U A 56 -23.883 -81.006 41.518 1.00 66.66 C
ATOM 22 P A A 57 -25.845 -76.701 36.628 1.00 82.23 P
ATOM 23 OP1 A A 57 -24.730 -76.854 35.658 1.00 79.94 O
ATOM 24 OP2 A A 57 -26.080 -75.424 37.351 1.00 65.83 O
ATOM 25 O5' A A 57 -27.195 -77.104 35.872 1.00 59.89 O
TER
ATOM 1 O3' U B 52 -20.449 -74.175 46.814 1.00 61.17 O
ATOM 2 P G B 53 -19.868 -75.286 45.788 1.00 49.49 P
ATOM 3 OP1 G B 53 -18.442 -75.509 46.143 1.00 55.78 O
ATOM 4 OP2 G B 53 -20.231 -74.935 44.400 1.00 50.49 O
ATOM 5 O5' G B 53 -20.735 -76.556 46.192 1.00 53.43 O
ATOM 6 C5' G B 53 -20.610 -77.094 47.499 1.00 61.27 C
ATOM 7 C4' G B 53 -20.713 -78.603 47.407 1.00 59.16 C
ATOM 8 O4' G B 53 -22.045 -78.958 46.971 1.00 57.37 O
ATOM 9 C3' G B 53 -19.769 -79.262 46.407 1.00 60.53 C
ATOM 10 O3' G B 53 -19.337 -80.498 46.938 1.00 73.46 O
ATOM 11 C2' G B 53 -20.650 -79.488 45.189 1.00 62.33 C
ATOM 12 O2' G B 53 -20.184 -80.576 44.414 1.00 70.56 O
ATOM 13 C1' G B 53 -21.963 -79.843 45.880 1.00 64.75 C
ATOM 14 N9 G B 53 -23.171 -79.648 45.081 1.00 71.41 N
ATOM 15 C8 G B 53 -23.299 -78.962 43.896 1.00 65.99 C
ATOM 16 N7 G B 53 -24.514 -78.962 43.421 1.00 58.40 N
ATOM 17 C5 G B 53 -25.233 -79.683 44.359 1.00 55.29 C
ATOM 18 C6 G B 53 -26.595 -80.009 44.380 1.00 56.04 C
ATOM 19 O6 G B 53 -27.445 -79.702 43.540 1.00 62.39 O
ATOM 20 N1 G B 53 -26.930 -80.751 45.509 1.00 59.29 N
ATOM 21 C2 G B 53 -26.051 -81.135 46.492 1.00 60.53 C
ATOM 22 N2 G B 53 -26.552 -81.855 47.509 1.00 61.32 N
ATOM 23 N3 G B 53 -24.761 -80.836 46.478 1.00 61.06 N
ATOM 24 C4 G B 53 -24.429 -80.110 45.385 1.00 60.74 C
ATOM 25 P G B 54 -17.781 -80.794 47.019 1.00 53.78 P
ATOM 26 OP1 G B 54 -17.603 -82.229 47.343 1.00 57.87 O
ATOM 27 OP2 G B 54 -17.170 -79.759 47.894 1.00 43.01 O
ATOM 28 O5' G B 54 -17.335 -80.577 45.503 1.00 43.88 O
TER
Atoms:
C4: (-24.825,-82.510,43.132)
N3: (-25.971,-82.439,42.373)
OP1: (-20.599,-78.583,35.769)
OP2: (-19.854,-78.328,38.252)
C2: (-26.151,-81.711,41.229)
C1': (-25.170,-80.149,39.566)
C3': (-24.487,-78.401,38.162)
O5': (-21.919,-79.524,37.694)
O4': (-24.512,-80.766,38.478)
C5': (-22.941,-79.922,36.801)
P: (-20.474,-79.123,37.148)
C4': (-24.296,-79.745,37.463)
C2': (-24.519,-78.770,39.644)
O2': (-25.313,-77.876,40.404)
N1: (-25.060,-80.983,40.809)
O4: (-24.811,-83.209,44.141)
O2: (-27.209,-81.724,40.635)
C6: (-23.883,-81.006,41.518)
C5: (-23.726,-81.726,42.634)
O3': (-25.725,-77.829,37.763)
N3: (-25.971,-82.439,42.373)
OP1: (-20.599,-78.583,35.769)
OP2: (-19.854,-78.328,38.252)
C2: (-26.151,-81.711,41.229)
C1': (-25.170,-80.149,39.566)
C3': (-24.487,-78.401,38.162)
O5': (-21.919,-79.524,37.694)
O4': (-24.512,-80.766,38.478)
C5': (-22.941,-79.922,36.801)
P: (-20.474,-79.123,37.148)
C4': (-24.296,-79.745,37.463)
C2': (-24.519,-78.770,39.644)
O2': (-25.313,-77.876,40.404)
N1: (-25.060,-80.983,40.809)
O4: (-24.811,-83.209,44.141)
O2: (-27.209,-81.724,40.635)
C6: (-23.883,-81.006,41.518)
C5: (-23.726,-81.726,42.634)
O3': (-25.725,-77.829,37.763)
OP1: (-18.442,-75.509,46.143)
OP2: (-20.231,-74.935,44.400)
C3': (-19.769,-79.262,46.407)
C1': (-21.963,-79.843,45.880)
C5': (-20.610,-77.094,47.499)
O6: (-27.445,-79.702,43.540)
O4': (-22.045,-78.958,46.971)
C8: (-23.299,-78.962,43.896)
C2: (-26.051,-81.135,46.492)
C6: (-26.595,-80.009,44.380)
C5: (-25.233,-79.683,44.359)
C4: (-24.429,-80.110,45.385)
P: (-19.868,-75.286,45.788)
C4': (-20.713,-78.603,47.407)
C2': (-20.650,-79.488,45.189)
O2': (-20.184,-80.576,44.414)
N1: (-26.930,-80.751,45.509)
N2: (-26.552,-81.855,47.509)
N3: (-24.761,-80.836,46.478)
N7: (-24.514,-78.962,43.421)
N9: (-23.171,-79.648,45.081)
O5': (-20.735,-76.556,46.192)
O3': (-19.337,-80.498,46.938)
OP2: (-20.231,-74.935,44.400)
C3': (-19.769,-79.262,46.407)
C1': (-21.963,-79.843,45.880)
C5': (-20.610,-77.094,47.499)
O6: (-27.445,-79.702,43.540)
O4': (-22.045,-78.958,46.971)
C8: (-23.299,-78.962,43.896)
C2: (-26.051,-81.135,46.492)
C6: (-26.595,-80.009,44.380)
C5: (-25.233,-79.683,44.359)
C4: (-24.429,-80.110,45.385)
P: (-19.868,-75.286,45.788)
C4': (-20.713,-78.603,47.407)
C2': (-20.650,-79.488,45.189)
O2': (-20.184,-80.576,44.414)
N1: (-26.930,-80.751,45.509)
N2: (-26.552,-81.855,47.509)
N3: (-24.761,-80.836,46.478)
N7: (-24.514,-78.962,43.421)
N9: (-23.171,-79.648,45.081)
O5': (-20.735,-76.556,46.192)
O3': (-19.337,-80.498,46.938)
Image (generated by PyMOL):