ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:02628:02621

Extra

PDB:
ATOM 1 O3' A A2627 48.561 101.750 167.036 1.00 54.89 O
ATOM 2 P U A2628 48.206 103.277 166.725 1.00 54.40 P
ATOM 3 OP1 U A2628 49.418 104.109 166.925 1.00 53.07 O
ATOM 4 OP2 U A2628 46.968 103.594 167.479 1.00 53.91 O
ATOM 5 O5' U A2628 47.856 103.255 165.174 1.00 53.21 O
ATOM 6 C5' U A2628 48.872 102.971 164.204 1.00 51.90 C
ATOM 7 C4' U A2628 48.274 102.921 162.821 1.00 51.78 C
ATOM 8 O4' U A2628 47.323 101.831 162.745 1.00 51.21 O
ATOM 9 C3' U A2628 47.483 104.140 162.383 1.00 49.49 C
ATOM 10 O3' U A2628 48.351 105.138 161.870 1.00 49.32 O
ATOM 11 C2' U A2628 46.601 103.562 161.287 1.00 49.91 C
ATOM 12 O2' U A2628 47.293 103.390 160.072 1.00 50.24 O
ATOM 13 C1' U A2628 46.280 102.179 161.857 1.00 50.54 C
ATOM 14 N1 U A2628 45.012 102.153 162.597 1.00 52.78 N
ATOM 15 C2 U A2628 43.864 101.853 161.888 1.00 54.12 C
ATOM 16 O2 U A2628 43.869 101.580 160.691 1.00 54.04 O
ATOM 17 N3 U A2628 42.708 101.882 162.628 1.00 54.12 N
ATOM 18 C4 U A2628 42.588 102.166 163.967 1.00 53.36 C
ATOM 19 O4 U A2628 41.474 102.184 164.478 1.00 55.46 O
ATOM 20 C5 U A2628 43.818 102.447 164.632 1.00 53.18 C
ATOM 21 C6 U A2628 44.959 102.431 163.946 1.00 52.53 C
ATOM 22 P C A2629 48.650 106.454 162.732 1.00 50.42 P
ATOM 23 OP1 C A2629 50.109 106.681 162.763 1.00 50.53 O
ATOM 24 OP2 C A2629 47.901 106.312 164.003 1.00 51.82 O
ATOM 25 O5' C A2629 47.995 107.640 161.899 1.00 49.69 O
TER

ATOM 1 O3' U B2620 39.112 109.154 168.682 1.00 53.32 O
ATOM 2 P G B2621 39.199 107.554 168.811 1.00 57.03 P
ATOM 3 OP1 G B2621 38.144 107.109 169.753 1.00 58.94 O
ATOM 4 OP2 G B2621 40.613 107.170 169.058 1.00 55.66 O
ATOM 5 O5' G B2621 38.780 107.032 167.367 1.00 57.20 O
ATOM 6 C5' G B2621 37.446 107.223 166.865 1.00 55.62 C
ATOM 7 C4' G B2621 37.289 106.529 165.534 1.00 55.94 C
ATOM 8 O4' G B2621 38.045 107.222 164.498 1.00 55.00 O
ATOM 9 C3' G B2621 37.858 105.125 165.483 1.00 55.06 C
ATOM 10 O3' G B2621 37.077 104.154 166.140 1.00 55.85 O
ATOM 11 C2' G B2621 38.013 104.901 163.988 1.00 53.66 C
ATOM 12 O2' G B2621 36.796 104.597 163.337 1.00 49.43 O
ATOM 13 C1' G B2621 38.553 106.270 163.559 1.00 54.37 C
ATOM 14 N9 G B2621 40.013 106.258 163.650 1.00 54.79 N
ATOM 15 C8 G B2621 40.776 106.626 164.731 1.00 54.64 C
ATOM 16 N7 G B2621 42.050 106.417 164.556 1.00 54.93 N
ATOM 17 C5 G B2621 42.142 105.902 163.274 1.00 54.16 C
ATOM 18 C6 G B2621 43.273 105.484 162.543 1.00 53.90 C
ATOM 19 O6 G B2621 44.458 105.483 162.896 1.00 54.05 O
ATOM 20 N1 G B2621 42.923 105.031 161.277 1.00 55.04 N
ATOM 21 C2 G B2621 41.641 104.992 160.778 1.00 55.95 C
ATOM 22 N2 G B2621 41.504 104.534 159.525 1.00 55.49 N
ATOM 23 N3 G B2621 40.574 105.377 161.457 1.00 55.15 N
ATOM 24 C4 G B2621 40.896 105.817 162.690 1.00 54.65 C
ATOM 25 P A B2622 37.772 102.793 166.612 1.00 57.71 P
ATOM 26 OP1 A B2622 37.043 102.319 167.807 1.00 57.68 O
ATOM 27 OP2 A B2622 39.240 102.994 166.678 1.00 56.68 O
ATOM 28 O5' A B2622 37.441 101.791 165.423 1.00 60.32 O
TER

Atoms:
C4: (42.588,102.166,163.967)
N3: (42.708,101.882,162.628)
OP1: (49.418,104.109,166.925)
OP2: (46.968,103.594,167.479)
C2: (43.864,101.853,161.888)
C1': (46.280,102.179,161.857)
C3': (47.483,104.140,162.383)
O5': (47.856,103.255,165.174)
O4': (47.323,101.831,162.745)
C5': (48.872,102.971,164.204)
P: (48.206,103.277,166.725)
C4': (48.274,102.921,162.821)
C2': (46.601,103.562,161.287)
O2': (47.293,103.390,160.072)
N1: (45.012,102.153,162.597)
O4: (41.474,102.184,164.478)
O2: (43.869,101.580,160.691)
C6: (44.959,102.431,163.946)
C5: (43.818,102.447,164.632)
O3': (48.351,105.138,161.870)
OP1: (38.144,107.109,169.753)
OP2: (40.613,107.170,169.058)
C3': (37.858,105.125,165.483)
C1': (38.553,106.270,163.559)
C5': (37.446,107.223,166.865)
O6: (44.458,105.483,162.896)
O4': (38.045,107.222,164.498)
C8: (40.776,106.626,164.731)
C2: (41.641,104.992,160.778)
C6: (43.273,105.484,162.543)
C5: (42.142,105.902,163.274)
C4: (40.896,105.817,162.690)
P: (39.199,107.554,168.811)
C4': (37.289,106.529,165.534)
C2': (38.013,104.901,163.988)
O2': (36.796,104.597,163.337)
N1: (42.923,105.031,161.277)
N2: (41.504,104.534,159.525)
N3: (40.574,105.377,161.457)
N7: (42.050,106.417,164.556)
N9: (40.013,106.258,163.650)
O5': (38.780,107.032,167.367)
O3': (37.077,104.154,166.140)
Image (generated by PyMOL):
PyMOL image
show in jmol