Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A1103:A1001
Extra
PDB:
ATOM 1 O3' C A1102 -56.461 117.727 219.822 1.00 16.23 O
ATOM 2 P G A1103 -55.997 119.240 220.108 1.00 26.08 P
ATOM 3 OP1 G A1103 -54.668 119.147 220.774 1.00 58.08 O
ATOM 4 OP2 G A1103 -57.100 119.997 220.767 1.00 58.13 O
ATOM 5 O5' G A1103 -55.784 119.866 218.661 1.00 65.26 O
ATOM 6 C5' G A1103 -55.014 119.182 217.654 1.00 65.26 C
ATOM 7 C4' G A1103 -55.626 119.417 216.288 1.00 65.26 C
ATOM 8 O4' G A1103 -57.008 118.983 216.331 1.00 65.26 O
ATOM 9 C3' G A1103 -55.668 120.864 215.811 1.00 65.26 C
ATOM 10 O3' G A1103 -54.480 121.159 215.050 1.00 65.26 O
ATOM 11 C2' G A1103 -56.891 120.884 214.890 1.00 65.26 C
ATOM 12 O2' G A1103 -56.562 120.467 213.584 1.00 65.26 O
ATOM 13 C1' G A1103 -57.798 119.810 215.501 1.00 65.26 C
ATOM 14 N9 G A1103 -58.966 120.262 216.261 1.00 52.02 N
ATOM 15 C8 G A1103 -59.023 120.541 217.607 1.00 52.00 C
ATOM 16 N7 G A1103 -60.208 120.923 218.004 1.00 52.05 N
ATOM 17 C5 G A1103 -60.980 120.902 216.853 1.00 52.02 C
ATOM 18 C6 G A1103 -62.346 121.237 216.657 1.00 52.05 C
ATOM 19 O6 G A1103 -63.171 121.654 217.483 1.00 52.12 O
ATOM 20 N1 G A1103 -62.726 121.056 215.340 1.00 52.04 N
ATOM 21 C2 G A1103 -61.904 120.623 214.337 1.00 52.08 C
ATOM 22 N2 G A1103 -62.471 120.504 213.139 1.00 52.09 N
ATOM 23 N3 G A1103 -60.627 120.326 214.496 1.00 52.14 N
ATOM 24 C4 G A1103 -60.234 120.486 215.770 1.00 52.04 C
ATOM 25 P A A1104 -53.401 122.230 215.592 1.00 93.32 P
ATOM 26 OP1 A A1104 -52.145 121.480 215.856 1.00 83.51 O
ATOM 27 OP2 A A1104 -54.036 123.027 216.687 1.00 83.60 O
ATOM 28 O5' A A1104 -53.122 123.196 214.347 1.00 18.54 O
TER
ATOM 1 O3' U B1000 -66.424 123.416 216.005 1.00 51.37 O
ATOM 2 P A B1001 -66.352 122.551 214.670 1.00 78.19 P
ATOM 3 OP1 A B1001 -67.712 122.229 214.212 1.00 33.69 O
ATOM 4 OP2 A B1001 -65.369 121.455 214.861 1.00 33.83 O
ATOM 5 O5' A B1001 -65.761 123.580 213.622 1.00 44.23 O
ATOM 6 C5' A B1001 -65.320 123.089 212.387 1.00 44.23 C
ATOM 7 C4' A B1001 -65.056 124.198 211.424 1.00 44.23 C
ATOM 8 O4' A B1001 -63.971 125.021 211.903 1.00 44.23 O
ATOM 9 C3' A B1001 -64.569 123.582 210.131 1.00 44.23 C
ATOM 10 O3' A B1001 -65.714 123.306 209.340 1.00 44.23 O
ATOM 11 C2' A B1001 -63.610 124.626 209.586 1.00 44.23 C
ATOM 12 O2' A B1001 -64.291 125.678 208.927 1.00 44.23 O
ATOM 13 C1' A B1001 -63.000 125.169 210.883 1.00 44.23 C
ATOM 14 N9 A B1001 -61.781 124.500 211.353 1.00 29.15 N
ATOM 15 C8 A B1001 -61.672 123.690 212.457 1.00 29.09 C
ATOM 16 N7 A B1001 -60.450 123.291 212.704 1.00 29.06 N
ATOM 17 C5 A B1001 -59.705 123.856 211.684 1.00 29.04 C
ATOM 18 C6 A B1001 -58.342 123.817 211.391 1.00 29.05 C
ATOM 19 N6 A B1001 -57.445 123.164 212.126 1.00 29.04 N
ATOM 20 N1 A B1001 -57.918 124.482 210.303 1.00 29.14 N
ATOM 21 C2 A B1001 -58.814 125.138 209.568 1.00 29.24 C
ATOM 22 N3 A B1001 -60.121 125.256 209.743 1.00 29.28 N
ATOM 23 C4 A B1001 -60.511 124.585 210.832 1.00 29.15 C
ATOM 24 P A B1002 -66.323 121.815 209.313 1.00 36.67 P
ATOM 25 OP1 A B1002 -67.728 121.933 208.853 1.00 43.42 O
ATOM 26 OP2 A B1002 -66.027 121.097 210.587 1.00 43.57 O
ATOM 27 O5' A B1002 -65.480 121.118 208.157 1.00 38.70 O
TER
ATOM 2 P G A1103 -55.997 119.240 220.108 1.00 26.08 P
ATOM 3 OP1 G A1103 -54.668 119.147 220.774 1.00 58.08 O
ATOM 4 OP2 G A1103 -57.100 119.997 220.767 1.00 58.13 O
ATOM 5 O5' G A1103 -55.784 119.866 218.661 1.00 65.26 O
ATOM 6 C5' G A1103 -55.014 119.182 217.654 1.00 65.26 C
ATOM 7 C4' G A1103 -55.626 119.417 216.288 1.00 65.26 C
ATOM 8 O4' G A1103 -57.008 118.983 216.331 1.00 65.26 O
ATOM 9 C3' G A1103 -55.668 120.864 215.811 1.00 65.26 C
ATOM 10 O3' G A1103 -54.480 121.159 215.050 1.00 65.26 O
ATOM 11 C2' G A1103 -56.891 120.884 214.890 1.00 65.26 C
ATOM 12 O2' G A1103 -56.562 120.467 213.584 1.00 65.26 O
ATOM 13 C1' G A1103 -57.798 119.810 215.501 1.00 65.26 C
ATOM 14 N9 G A1103 -58.966 120.262 216.261 1.00 52.02 N
ATOM 15 C8 G A1103 -59.023 120.541 217.607 1.00 52.00 C
ATOM 16 N7 G A1103 -60.208 120.923 218.004 1.00 52.05 N
ATOM 17 C5 G A1103 -60.980 120.902 216.853 1.00 52.02 C
ATOM 18 C6 G A1103 -62.346 121.237 216.657 1.00 52.05 C
ATOM 19 O6 G A1103 -63.171 121.654 217.483 1.00 52.12 O
ATOM 20 N1 G A1103 -62.726 121.056 215.340 1.00 52.04 N
ATOM 21 C2 G A1103 -61.904 120.623 214.337 1.00 52.08 C
ATOM 22 N2 G A1103 -62.471 120.504 213.139 1.00 52.09 N
ATOM 23 N3 G A1103 -60.627 120.326 214.496 1.00 52.14 N
ATOM 24 C4 G A1103 -60.234 120.486 215.770 1.00 52.04 C
ATOM 25 P A A1104 -53.401 122.230 215.592 1.00 93.32 P
ATOM 26 OP1 A A1104 -52.145 121.480 215.856 1.00 83.51 O
ATOM 27 OP2 A A1104 -54.036 123.027 216.687 1.00 83.60 O
ATOM 28 O5' A A1104 -53.122 123.196 214.347 1.00 18.54 O
TER
ATOM 1 O3' U B1000 -66.424 123.416 216.005 1.00 51.37 O
ATOM 2 P A B1001 -66.352 122.551 214.670 1.00 78.19 P
ATOM 3 OP1 A B1001 -67.712 122.229 214.212 1.00 33.69 O
ATOM 4 OP2 A B1001 -65.369 121.455 214.861 1.00 33.83 O
ATOM 5 O5' A B1001 -65.761 123.580 213.622 1.00 44.23 O
ATOM 6 C5' A B1001 -65.320 123.089 212.387 1.00 44.23 C
ATOM 7 C4' A B1001 -65.056 124.198 211.424 1.00 44.23 C
ATOM 8 O4' A B1001 -63.971 125.021 211.903 1.00 44.23 O
ATOM 9 C3' A B1001 -64.569 123.582 210.131 1.00 44.23 C
ATOM 10 O3' A B1001 -65.714 123.306 209.340 1.00 44.23 O
ATOM 11 C2' A B1001 -63.610 124.626 209.586 1.00 44.23 C
ATOM 12 O2' A B1001 -64.291 125.678 208.927 1.00 44.23 O
ATOM 13 C1' A B1001 -63.000 125.169 210.883 1.00 44.23 C
ATOM 14 N9 A B1001 -61.781 124.500 211.353 1.00 29.15 N
ATOM 15 C8 A B1001 -61.672 123.690 212.457 1.00 29.09 C
ATOM 16 N7 A B1001 -60.450 123.291 212.704 1.00 29.06 N
ATOM 17 C5 A B1001 -59.705 123.856 211.684 1.00 29.04 C
ATOM 18 C6 A B1001 -58.342 123.817 211.391 1.00 29.05 C
ATOM 19 N6 A B1001 -57.445 123.164 212.126 1.00 29.04 N
ATOM 20 N1 A B1001 -57.918 124.482 210.303 1.00 29.14 N
ATOM 21 C2 A B1001 -58.814 125.138 209.568 1.00 29.24 C
ATOM 22 N3 A B1001 -60.121 125.256 209.743 1.00 29.28 N
ATOM 23 C4 A B1001 -60.511 124.585 210.832 1.00 29.15 C
ATOM 24 P A B1002 -66.323 121.815 209.313 1.00 36.67 P
ATOM 25 OP1 A B1002 -67.728 121.933 208.853 1.00 43.42 O
ATOM 26 OP2 A B1002 -66.027 121.097 210.587 1.00 43.57 O
ATOM 27 O5' A B1002 -65.480 121.118 208.157 1.00 38.70 O
TER
Atoms:
OP1: (-54.668,119.147,220.774)
OP2: (-57.100,119.997,220.767)
C3': (-55.668,120.864,215.811)
C1': (-57.798,119.810,215.501)
C5': (-55.014,119.182,217.654)
O6: (-63.171,121.654,217.483)
O4': (-57.008,118.983,216.331)
C8: (-59.023,120.541,217.607)
C2: (-61.904,120.623,214.337)
C6: (-62.346,121.237,216.657)
C5: (-60.980,120.902,216.853)
C4: (-60.234,120.486,215.770)
P: (-55.997,119.240,220.108)
C4': (-55.626,119.417,216.288)
C2': (-56.891,120.884,214.890)
O2': (-56.562,120.467,213.584)
N1: (-62.726,121.056,215.340)
N2: (-62.471,120.504,213.139)
N3: (-60.627,120.326,214.496)
N7: (-60.208,120.923,218.004)
N9: (-58.966,120.262,216.261)
O5': (-55.784,119.866,218.661)
O3': (-54.480,121.159,215.050)
OP2: (-57.100,119.997,220.767)
C3': (-55.668,120.864,215.811)
C1': (-57.798,119.810,215.501)
C5': (-55.014,119.182,217.654)
O6: (-63.171,121.654,217.483)
O4': (-57.008,118.983,216.331)
C8: (-59.023,120.541,217.607)
C2: (-61.904,120.623,214.337)
C6: (-62.346,121.237,216.657)
C5: (-60.980,120.902,216.853)
C4: (-60.234,120.486,215.770)
P: (-55.997,119.240,220.108)
C4': (-55.626,119.417,216.288)
C2': (-56.891,120.884,214.890)
O2': (-56.562,120.467,213.584)
N1: (-62.726,121.056,215.340)
N2: (-62.471,120.504,213.139)
N3: (-60.627,120.326,214.496)
N7: (-60.208,120.923,218.004)
N9: (-58.966,120.262,216.261)
O5': (-55.784,119.866,218.661)
O3': (-54.480,121.159,215.050)
OP1: (-67.712,122.229,214.212)
OP2: (-65.369,121.455,214.861)
C3': (-64.569,123.582,210.131)
C1': (-63.000,125.169,210.883)
C5': (-65.320,123.089,212.387)
O4': (-63.971,125.021,211.903)
C8: (-61.672,123.690,212.457)
O2': (-64.291,125.678,208.927)
C6: (-58.342,123.817,211.391)
C5: (-59.705,123.856,211.684)
C4: (-60.511,124.585,210.832)
P: (-66.352,122.551,214.670)
C4': (-65.056,124.198,211.424)
C2': (-63.610,124.626,209.586)
C2: (-58.814,125.138,209.568)
N1: (-57.918,124.482,210.303)
N3: (-60.121,125.256,209.743)
N6: (-57.445,123.164,212.126)
N7: (-60.450,123.291,212.704)
N9: (-61.781,124.500,211.353)
O5': (-65.761,123.580,213.622)
O3': (-65.714,123.306,209.340)
OP2: (-65.369,121.455,214.861)
C3': (-64.569,123.582,210.131)
C1': (-63.000,125.169,210.883)
C5': (-65.320,123.089,212.387)
O4': (-63.971,125.021,211.903)
C8: (-61.672,123.690,212.457)
O2': (-64.291,125.678,208.927)
C6: (-58.342,123.817,211.391)
C5: (-59.705,123.856,211.684)
C4: (-60.511,124.585,210.832)
P: (-66.352,122.551,214.670)
C4': (-65.056,124.198,211.424)
C2': (-63.610,124.626,209.586)
C2: (-58.814,125.138,209.568)
N1: (-57.918,124.482,210.303)
N3: (-60.121,125.256,209.743)
N6: (-57.445,123.164,212.126)
N7: (-60.450,123.291,212.704)
N9: (-61.781,124.500,211.353)
O5': (-65.761,123.580,213.622)
O3': (-65.714,123.306,209.340)
Image (generated by PyMOL):