ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A1217:A1056

Extra

PDB:
ATOM 1 O3' C A1216 12.658 103.914 112.782 1.00 35.43 O
ATOM 2 P G A1217 12.755 103.713 111.194 1.00 34.03 P
ATOM 3 OP1 G A1217 12.649 105.054 110.571 1.00 32.14 O
ATOM 4 OP2 G A1217 11.854 102.620 110.761 1.00 30.81 O
ATOM 5 O5' G A1217 14.250 103.243 110.983 1.00 33.74 O
ATOM 6 C5' G A1217 15.332 104.168 111.137 1.00 33.18 C
ATOM 7 C4' G A1217 16.618 103.466 110.843 1.00 32.49 C
ATOM 8 O4' G A1217 16.757 102.369 111.778 1.00 33.10 O
ATOM 9 C3' G A1217 16.603 102.814 109.472 1.00 32.48 C
ATOM 10 O3' G A1217 17.039 103.749 108.489 1.00 32.61 O
ATOM 11 C2' G A1217 17.548 101.641 109.652 1.00 32.96 C
ATOM 12 O2' G A1217 18.886 102.072 109.548 1.00 35.04 O
ATOM 13 C1' G A1217 17.261 101.236 111.104 1.00 33.32 C
ATOM 14 N9 G A1217 16.300 100.154 111.269 1.00 34.07 N
ATOM 15 C8 G A1217 14.928 100.246 111.268 1.00 35.78 C
ATOM 16 N7 G A1217 14.338 99.101 111.473 1.00 35.99 N
ATOM 17 C5 G A1217 15.383 98.206 111.613 1.00 34.95 C
ATOM 18 C6 G A1217 15.366 96.822 111.867 1.00 37.05 C
ATOM 19 O6 G A1217 14.388 96.081 112.034 1.00 40.39 O
ATOM 20 N1 G A1217 16.657 96.300 111.934 1.00 36.43 N
ATOM 21 C2 G A1217 17.813 97.024 111.788 1.00 34.97 C
ATOM 22 N2 G A1217 18.969 96.346 111.911 1.00 33.30 N
ATOM 23 N3 G A1217 17.837 98.323 111.548 1.00 34.86 N
ATOM 24 C4 G A1217 16.598 98.843 111.477 1.00 34.26 C
ATOM 25 P A A1218 16.451 103.678 106.992 1.00 34.74 P
ATOM 26 OP1 A A1218 16.703 104.986 106.331 1.00 31.88 O
ATOM 27 OP2 A A1218 15.072 103.114 107.017 1.00 35.16 O
ATOM 28 O5' A A1218 17.349 102.596 106.258 1.00 33.04 O
TER

ATOM 1 O3' U B1055 15.675 92.332 111.027 1.00 29.88 O
ATOM 2 P A B1056 17.107 92.585 111.686 1.00 29.89 P
ATOM 3 OP1 A B1056 17.497 91.395 112.463 1.00 28.89 O
ATOM 4 OP2 A B1056 17.049 93.915 112.345 1.00 27.23 O
ATOM 5 O5' A B1056 18.075 92.663 110.435 1.00 29.11 O
ATOM 6 C5' A B1056 18.533 91.473 109.788 1.00 30.61 C
ATOM 7 C4' A B1056 19.795 91.776 109.033 1.00 31.09 C
ATOM 8 O4' A B1056 19.500 92.696 107.953 1.00 31.31 O
ATOM 9 C3' A B1056 20.882 92.473 109.842 1.00 30.08 C
ATOM 10 O3' A B1056 21.652 91.497 110.540 1.00 29.16 O
ATOM 11 C2' A B1056 21.700 93.117 108.739 1.00 31.08 C
ATOM 12 O2' A B1056 22.480 92.127 108.105 1.00 32.07 O
ATOM 13 C1' A B1056 20.604 93.551 107.759 1.00 30.91 C
ATOM 14 N9 A B1056 20.162 94.939 107.912 1.00 31.05 N
ATOM 15 C8 A B1056 19.035 95.449 108.511 1.00 30.26 C
ATOM 16 N7 A B1056 18.940 96.753 108.433 1.00 30.27 N
ATOM 17 C5 A B1056 20.086 97.126 107.747 1.00 30.53 C
ATOM 18 C6 A B1056 20.582 98.375 107.329 1.00 31.03 C
ATOM 19 N6 A B1056 19.963 99.535 107.550 1.00 30.01 N
ATOM 20 N1 A B1056 21.756 98.389 106.662 1.00 32.10 N
ATOM 21 C2 A B1056 22.379 97.224 106.432 1.00 33.48 C
ATOM 22 N3 A B1056 22.013 95.996 106.770 1.00 32.03 N
ATOM 23 C4 A B1056 20.847 96.019 107.430 1.00 31.07 C
ATOM 24 P A B1057 22.235 91.809 112.003 1.00 30.20 P
ATOM 25 OP1 A B1057 22.729 90.510 112.486 1.00 28.77 O
ATOM 26 OP2 A B1057 21.219 92.553 112.792 1.00 29.69 O
ATOM 27 O5' A B1057 23.481 92.778 111.769 1.00 30.65 O
TER

Atoms:
OP1: (12.649,105.054,110.571)
OP2: (11.854,102.620,110.761)
C3': (16.603,102.814,109.472)
C1': (17.261,101.236,111.104)
C5': (15.332,104.168,111.137)
O6: (14.388,96.081,112.034)
O4': (16.757,102.369,111.778)
C8: (14.928,100.246,111.268)
C2: (17.813,97.024,111.788)
C6: (15.366,96.822,111.867)
C5: (15.383,98.206,111.613)
C4: (16.598,98.843,111.477)
P: (12.755,103.713,111.194)
C4': (16.618,103.466,110.843)
C2': (17.548,101.641,109.652)
O2': (18.886,102.072,109.548)
N1: (16.657,96.300,111.934)
N2: (18.969,96.346,111.911)
N3: (17.837,98.323,111.548)
N7: (14.338,99.101,111.473)
N9: (16.300,100.154,111.269)
O5': (14.250,103.243,110.983)
O3': (17.039,103.749,108.489)
OP1: (17.497,91.395,112.463)
OP2: (17.049,93.915,112.345)
C3': (20.882,92.473,109.842)
C1': (20.604,93.551,107.759)
C5': (18.533,91.473,109.788)
O4': (19.500,92.696,107.953)
C8: (19.035,95.449,108.511)
O2': (22.480,92.127,108.105)
C6: (20.582,98.375,107.329)
C5: (20.086,97.126,107.747)
C4: (20.847,96.019,107.430)
P: (17.107,92.585,111.686)
C4': (19.795,91.776,109.033)
C2': (21.700,93.117,108.739)
C2: (22.379,97.224,106.432)
N1: (21.756,98.389,106.662)
N3: (22.013,95.996,106.770)
N6: (19.963,99.535,107.550)
N7: (18.940,96.753,108.433)
N9: (20.162,94.939,107.912)
O5': (18.075,92.663,110.435)
O3': (21.652,91.497,110.540)
Image (generated by PyMOL):
PyMOL image
show in jmol