Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A1103:A1001
Extra
PDB:
ATOM 1 O3' C A1102 110.962-106.944 -2.115 1.00 47.33 O
ATOM 2 P G A1103 110.528-106.805 -3.648 1.00 37.92 P
ATOM 3 OP1 G A1103 109.092-107.142 -3.724 1.00 58.74 O
ATOM 4 OP2 G A1103 111.486-107.602 -4.459 1.00 64.48 O
ATOM 5 O5' G A1103 110.744-105.264 -3.929 1.00 53.54 O
ATOM 6 C5' G A1103 109.835-104.300 -3.432 1.00 64.12 C
ATOM 7 C4' G A1103 110.291-102.903 -3.743 1.00 54.47 C
ATOM 8 O4' G A1103 111.595-102.698 -3.173 1.00 54.60 O
ATOM 9 C3' G A1103 110.439-102.567 -5.224 1.00 55.96 C
ATOM 10 O3' G A1103 109.244-102.049 -5.783 1.00 61.74 O
ATOM 11 C2' G A1103 111.558-101.549 -5.244 1.00 55.00 C
ATOM 12 O2' G A1103 111.036-100.260 -5.003 1.00 55.76 O
ATOM 13 C1' G A1103 112.405-101.958 -4.045 1.00 61.69 C
ATOM 14 N9 G A1103 113.568-102.788 -4.423 1.00 55.93 N
ATOM 15 C8 G A1103 113.581-104.152 -4.535 1.00 62.03 C
ATOM 16 N7 G A1103 114.740-104.643 -4.865 1.00 57.41 N
ATOM 17 C5 G A1103 115.539-103.530 -4.948 1.00 52.96 C
ATOM 18 C6 G A1103 116.902-103.453 -5.258 1.00 54.88 C
ATOM 19 O6 G A1103 117.679-104.377 -5.521 1.00 52.02 O
ATOM 20 N1 G A1103 117.334-102.144 -5.247 1.00 49.80 N
ATOM 21 C2 G A1103 116.556-101.066 -4.959 1.00 45.21 C
ATOM 22 N2 G A1103 117.171 -99.888 -4.992 1.00 45.94 N
ATOM 23 N3 G A1103 115.283-101.129 -4.661 1.00 47.18 N
ATOM 24 C4 G A1103 114.846-102.387 -4.674 1.00 46.46 C
ATOM 25 P A A1104 108.209-102.996 -6.553 1.00 46.23 P
ATOM 26 OP1 A A1104 107.071-103.244 -5.632 1.00 75.50 O
ATOM 27 OP2 A A1104 108.973-104.143 -7.069 1.00 63.76 O
ATOM 28 O5' A A1104 107.740-102.073 -7.749 1.00 45.74 O
TER
ATOM 1 O3' U B1000 120.782-102.434 -7.698 1.00 33.10 O
ATOM 2 P A B1001 120.651-101.250 -6.628 1.00 19.29 P
ATOM 3 OP1 A B1001 121.997-100.797 -6.276 1.00 52.29 O
ATOM 4 OP2 A B1001 119.785-101.740 -5.544 1.00 44.71 O
ATOM 5 O5' A B1001 119.913-100.122 -7.453 1.00 48.25 O
ATOM 6 C5' A B1001 120.402 -99.691 -8.712 1.00 45.70 C
ATOM 7 C4' A B1001 119.699 -98.446 -9.167 1.00 49.31 C
ATOM 8 O4' A B1001 118.421 -98.789 -9.743 1.00 46.53 O
ATOM 9 C3' A B1001 119.377 -97.457 -8.077 1.00 45.08 C
ATOM 10 O3' A B1001 120.467 -96.605 -7.806 1.00 40.82 O
ATOM 11 C2' A B1001 118.154 -96.724 -8.615 1.00 47.72 C
ATOM 12 O2' A B1001 118.540 -95.645 -9.441 1.00 52.39 O
ATOM 13 C1' A B1001 117.493 -97.776 -9.496 1.00 44.69 C
ATOM 14 N9 A B1001 116.292 -98.374 -8.889 1.00 49.04 N
ATOM 15 C8 A B1001 116.195 -99.563 -8.231 1.00 44.88 C
ATOM 16 N7 A B1001 114.982 -99.851 -7.866 1.00 49.46 N
ATOM 17 C5 A B1001 114.225 -98.787 -8.334 1.00 43.91 C
ATOM 18 C6 A B1001 112.853 -98.495 -8.280 1.00 40.01 C
ATOM 19 N6 A B1001 111.921 -99.248 -7.697 1.00 38.89 N
ATOM 20 N1 A B1001 112.441 -97.365 -8.857 1.00 42.39 N
ATOM 21 C2 A B1001 113.346 -96.590 -9.445 1.00 41.12 C
ATOM 22 N3 A B1001 114.643 -96.762 -9.557 1.00 39.26 N
ATOM 23 C4 A B1001 115.018 -97.887 -8.980 1.00 43.14 C
ATOM 24 P A B1002 120.934 -96.328 -6.305 1.00 48.89 P
ATOM 25 OP1 A B1002 122.314 -95.796 -6.373 1.00 57.71 O
ATOM 26 OP2 A B1002 120.685 -97.564 -5.523 1.00 48.48 O
ATOM 27 O5' A B1002 119.940 -95.177 -5.852 1.00 53.34 O
TER
ATOM 2 P G A1103 110.528-106.805 -3.648 1.00 37.92 P
ATOM 3 OP1 G A1103 109.092-107.142 -3.724 1.00 58.74 O
ATOM 4 OP2 G A1103 111.486-107.602 -4.459 1.00 64.48 O
ATOM 5 O5' G A1103 110.744-105.264 -3.929 1.00 53.54 O
ATOM 6 C5' G A1103 109.835-104.300 -3.432 1.00 64.12 C
ATOM 7 C4' G A1103 110.291-102.903 -3.743 1.00 54.47 C
ATOM 8 O4' G A1103 111.595-102.698 -3.173 1.00 54.60 O
ATOM 9 C3' G A1103 110.439-102.567 -5.224 1.00 55.96 C
ATOM 10 O3' G A1103 109.244-102.049 -5.783 1.00 61.74 O
ATOM 11 C2' G A1103 111.558-101.549 -5.244 1.00 55.00 C
ATOM 12 O2' G A1103 111.036-100.260 -5.003 1.00 55.76 O
ATOM 13 C1' G A1103 112.405-101.958 -4.045 1.00 61.69 C
ATOM 14 N9 G A1103 113.568-102.788 -4.423 1.00 55.93 N
ATOM 15 C8 G A1103 113.581-104.152 -4.535 1.00 62.03 C
ATOM 16 N7 G A1103 114.740-104.643 -4.865 1.00 57.41 N
ATOM 17 C5 G A1103 115.539-103.530 -4.948 1.00 52.96 C
ATOM 18 C6 G A1103 116.902-103.453 -5.258 1.00 54.88 C
ATOM 19 O6 G A1103 117.679-104.377 -5.521 1.00 52.02 O
ATOM 20 N1 G A1103 117.334-102.144 -5.247 1.00 49.80 N
ATOM 21 C2 G A1103 116.556-101.066 -4.959 1.00 45.21 C
ATOM 22 N2 G A1103 117.171 -99.888 -4.992 1.00 45.94 N
ATOM 23 N3 G A1103 115.283-101.129 -4.661 1.00 47.18 N
ATOM 24 C4 G A1103 114.846-102.387 -4.674 1.00 46.46 C
ATOM 25 P A A1104 108.209-102.996 -6.553 1.00 46.23 P
ATOM 26 OP1 A A1104 107.071-103.244 -5.632 1.00 75.50 O
ATOM 27 OP2 A A1104 108.973-104.143 -7.069 1.00 63.76 O
ATOM 28 O5' A A1104 107.740-102.073 -7.749 1.00 45.74 O
TER
ATOM 1 O3' U B1000 120.782-102.434 -7.698 1.00 33.10 O
ATOM 2 P A B1001 120.651-101.250 -6.628 1.00 19.29 P
ATOM 3 OP1 A B1001 121.997-100.797 -6.276 1.00 52.29 O
ATOM 4 OP2 A B1001 119.785-101.740 -5.544 1.00 44.71 O
ATOM 5 O5' A B1001 119.913-100.122 -7.453 1.00 48.25 O
ATOM 6 C5' A B1001 120.402 -99.691 -8.712 1.00 45.70 C
ATOM 7 C4' A B1001 119.699 -98.446 -9.167 1.00 49.31 C
ATOM 8 O4' A B1001 118.421 -98.789 -9.743 1.00 46.53 O
ATOM 9 C3' A B1001 119.377 -97.457 -8.077 1.00 45.08 C
ATOM 10 O3' A B1001 120.467 -96.605 -7.806 1.00 40.82 O
ATOM 11 C2' A B1001 118.154 -96.724 -8.615 1.00 47.72 C
ATOM 12 O2' A B1001 118.540 -95.645 -9.441 1.00 52.39 O
ATOM 13 C1' A B1001 117.493 -97.776 -9.496 1.00 44.69 C
ATOM 14 N9 A B1001 116.292 -98.374 -8.889 1.00 49.04 N
ATOM 15 C8 A B1001 116.195 -99.563 -8.231 1.00 44.88 C
ATOM 16 N7 A B1001 114.982 -99.851 -7.866 1.00 49.46 N
ATOM 17 C5 A B1001 114.225 -98.787 -8.334 1.00 43.91 C
ATOM 18 C6 A B1001 112.853 -98.495 -8.280 1.00 40.01 C
ATOM 19 N6 A B1001 111.921 -99.248 -7.697 1.00 38.89 N
ATOM 20 N1 A B1001 112.441 -97.365 -8.857 1.00 42.39 N
ATOM 21 C2 A B1001 113.346 -96.590 -9.445 1.00 41.12 C
ATOM 22 N3 A B1001 114.643 -96.762 -9.557 1.00 39.26 N
ATOM 23 C4 A B1001 115.018 -97.887 -8.980 1.00 43.14 C
ATOM 24 P A B1002 120.934 -96.328 -6.305 1.00 48.89 P
ATOM 25 OP1 A B1002 122.314 -95.796 -6.373 1.00 57.71 O
ATOM 26 OP2 A B1002 120.685 -97.564 -5.523 1.00 48.48 O
ATOM 27 O5' A B1002 119.940 -95.177 -5.852 1.00 53.34 O
TER
Atoms:
OP1: (109.092,-107.142,-3.724)
OP2: (111.486,-107.602,-4.459)
C3': (110.439,-102.567,-5.224)
C1': (112.405,-101.958,-4.045)
C5': (109.835,-104.300,-3.432)
O6: (117.679,-104.377,-5.521)
O4': (111.595,-102.698,-3.173)
C8: (113.581,-104.152,-4.535)
C2: (116.556,-101.066,-4.959)
C6: (116.902,-103.453,-5.258)
C5: (115.539,-103.530,-4.948)
C4: (114.846,-102.387,-4.674)
P: (110.528,-106.805,-3.648)
C4': (110.291,-102.903,-3.743)
C2': (111.558,-101.549,-5.244)
O2': (111.036,-100.260,-5.003)
N1: (117.334,-102.144,-5.247)
N2: (117.171,-99.888,-4.992)
N3: (115.283,-101.129,-4.661)
N7: (114.740,-104.643,-4.865)
N9: (113.568,-102.788,-4.423)
O5': (110.744,-105.264,-3.929)
O3': (109.244,-102.049,-5.783)
OP2: (111.486,-107.602,-4.459)
C3': (110.439,-102.567,-5.224)
C1': (112.405,-101.958,-4.045)
C5': (109.835,-104.300,-3.432)
O6: (117.679,-104.377,-5.521)
O4': (111.595,-102.698,-3.173)
C8: (113.581,-104.152,-4.535)
C2: (116.556,-101.066,-4.959)
C6: (116.902,-103.453,-5.258)
C5: (115.539,-103.530,-4.948)
C4: (114.846,-102.387,-4.674)
P: (110.528,-106.805,-3.648)
C4': (110.291,-102.903,-3.743)
C2': (111.558,-101.549,-5.244)
O2': (111.036,-100.260,-5.003)
N1: (117.334,-102.144,-5.247)
N2: (117.171,-99.888,-4.992)
N3: (115.283,-101.129,-4.661)
N7: (114.740,-104.643,-4.865)
N9: (113.568,-102.788,-4.423)
O5': (110.744,-105.264,-3.929)
O3': (109.244,-102.049,-5.783)
OP1: (121.997,-100.797,-6.276)
OP2: (119.785,-101.740,-5.544)
C3': (119.377,-97.457,-8.077)
C1': (117.493,-97.776,-9.496)
C5': (120.402,-99.691,-8.712)
O4': (118.421,-98.789,-9.743)
C8: (116.195,-99.563,-8.231)
O2': (118.540,-95.645,-9.441)
C6: (112.853,-98.495,-8.280)
C5: (114.225,-98.787,-8.334)
C4: (115.018,-97.887,-8.980)
P: (120.651,-101.250,-6.628)
C4': (119.699,-98.446,-9.167)
C2': (118.154,-96.724,-8.615)
C2: (113.346,-96.590,-9.445)
N1: (112.441,-97.365,-8.857)
N3: (114.643,-96.762,-9.557)
N6: (111.921,-99.248,-7.697)
N7: (114.982,-99.851,-7.866)
N9: (116.292,-98.374,-8.889)
O5': (119.913,-100.122,-7.453)
O3': (120.467,-96.605,-7.806)
OP2: (119.785,-101.740,-5.544)
C3': (119.377,-97.457,-8.077)
C1': (117.493,-97.776,-9.496)
C5': (120.402,-99.691,-8.712)
O4': (118.421,-98.789,-9.743)
C8: (116.195,-99.563,-8.231)
O2': (118.540,-95.645,-9.441)
C6: (112.853,-98.495,-8.280)
C5: (114.225,-98.787,-8.334)
C4: (115.018,-97.887,-8.980)
P: (120.651,-101.250,-6.628)
C4': (119.699,-98.446,-9.167)
C2': (118.154,-96.724,-8.615)
C2: (113.346,-96.590,-9.445)
N1: (112.441,-97.365,-8.857)
N3: (114.643,-96.762,-9.557)
N6: (111.921,-99.248,-7.697)
N7: (114.982,-99.851,-7.866)
N9: (116.292,-98.374,-8.889)
O5': (119.913,-100.122,-7.453)
O3': (120.467,-96.605,-7.806)
Image (generated by PyMOL):