ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A554:A737

Extra

PDB:
ATOM 1 O3' G A 553 163.355 103.672 -34.175 1.00 26.43 O
ATOM 2 P G A 554 162.932 102.992 -35.571 1.00 26.28 P
ATOM 3 OP1 G A 554 164.025 102.049 -35.808 1.00 29.06 O
ATOM 4 OP2 G A 554 162.622 103.984 -36.639 1.00 29.15 O
ATOM 5 O5' G A 554 161.654 102.099 -35.234 1.00 27.15 O
ATOM 6 C5' G A 554 161.799 100.751 -34.731 1.00 24.64 C
ATOM 7 C4' G A 554 161.390 99.719 -35.781 1.00 23.41 C
ATOM 8 O4' G A 554 159.978 99.404 -35.736 1.00 21.40 O
ATOM 9 C3' G A 554 161.764 99.940 -37.245 1.00 23.13 C
ATOM 10 O3' G A 554 162.262 98.729 -37.750 1.00 25.17 O
ATOM 11 C2' G A 554 160.416 100.182 -37.917 1.00 22.37 C
ATOM 12 O2' G A 554 160.350 99.687 -39.243 1.00 21.73 O
ATOM 13 C1' G A 554 159.468 99.352 -37.051 1.00 22.89 C
ATOM 14 N9 G A 554 158.118 99.908 -37.054 1.00 24.64 N
ATOM 15 C8 G A 554 157.767 101.193 -36.724 1.00 25.08 C
ATOM 16 N7 G A 554 156.501 101.430 -36.883 1.00 26.21 N
ATOM 17 C5 G A 554 155.979 100.228 -37.333 1.00 24.29 C
ATOM 18 C6 G A 554 154.658 99.894 -37.702 1.00 25.84 C
ATOM 19 O6 G A 554 153.664 100.629 -37.746 1.00 28.45 O
ATOM 20 N1 G A 554 154.552 98.561 -38.070 1.00 25.46 N
ATOM 21 C2 G A 554 155.591 97.674 -38.103 1.00 25.19 C
ATOM 22 N2 G A 554 155.283 96.428 -38.465 1.00 25.06 N
ATOM 23 N3 G A 554 156.841 97.987 -37.797 1.00 26.13 N
ATOM 24 C4 G A 554 156.958 99.273 -37.419 1.00 23.35 C
ATOM 25 P G A 555 163.834 98.543 -37.992 1.00 25.50 P
ATOM 26 OP1 G A 555 163.972 97.131 -38.473 1.00 26.45 O
ATOM 27 OP2 G A 555 164.548 99.010 -36.757 1.00 25.33 O
ATOM 28 O5' G A 555 164.158 99.471 -39.234 1.00 21.34 O
TER

ATOM 1 O3' G B 736 150.510 98.911 -39.546 1.00 28.93 O
ATOM 2 P A B 737 151.136 97.552 -40.127 1.00 26.49 P
ATOM 3 OP1 A B 737 152.573 97.610 -39.793 1.00 25.43 O
ATOM 4 OP2 A B 737 150.689 97.366 -41.527 1.00 27.41 O
ATOM 5 O5' A B 737 150.501 96.453 -39.198 1.00 27.33 O
ATOM 6 C5' A B 737 150.604 96.573 -37.771 1.00 27.79 C
ATOM 7 C4' A B 737 150.172 95.293 -37.103 1.00 29.91 C
ATOM 8 O4' A B 737 148.732 95.131 -37.181 1.00 30.29 O
ATOM 9 C3' A B 737 150.690 93.998 -37.697 1.00 31.09 C
ATOM 10 O3' A B 737 152.004 93.716 -37.345 1.00 33.35 O
ATOM 11 C2' A B 737 149.728 92.983 -37.114 1.00 29.99 C
ATOM 12 O2' A B 737 150.073 92.705 -35.772 1.00 30.31 O
ATOM 13 C1' A B 737 148.410 93.753 -37.162 1.00 28.41 C
ATOM 14 N9 A B 737 147.649 93.412 -38.366 1.00 26.92 N
ATOM 15 C8 A B 737 147.650 94.000 -39.609 1.00 26.60 C
ATOM 16 N7 A B 737 146.894 93.377 -40.489 1.00 25.81 N
ATOM 17 C5 A B 737 146.348 92.323 -39.772 1.00 26.87 C
ATOM 18 C6 A B 737 145.473 91.279 -40.130 1.00 27.34 C
ATOM 19 N6 A B 737 144.987 91.102 -41.357 1.00 28.66 N
ATOM 20 N1 A B 737 145.118 90.397 -39.168 1.00 25.94 N
ATOM 21 C2 A B 737 145.618 90.551 -37.942 1.00 26.05 C
ATOM 22 N3 A B 737 146.455 91.479 -37.484 1.00 27.91 N
ATOM 23 C4 A B 737 146.787 92.345 -38.460 1.00 27.65 C
ATOM 24 P G B 738 153.048 93.318 -38.495 1.00 34.79 P
ATOM 25 OP1 G B 738 154.212 92.788 -37.729 1.00 36.06 O
ATOM 26 OP2 G B 738 153.239 94.445 -39.434 1.00 35.68 O
ATOM 27 O5' G B 738 152.313 92.165 -39.308 1.00 35.23 O
TER

Atoms:
OP1: (164.025,102.049,-35.808)
OP2: (162.622,103.984,-36.639)
C3': (161.764,99.940,-37.245)
C1': (159.468,99.352,-37.051)
C5': (161.799,100.751,-34.731)
O6: (153.664,100.629,-37.746)
O4': (159.978,99.404,-35.736)
C8: (157.767,101.193,-36.724)
C2: (155.591,97.674,-38.103)
C6: (154.658,99.894,-37.702)
C5: (155.979,100.228,-37.333)
C4: (156.958,99.273,-37.419)
P: (162.932,102.992,-35.571)
C4': (161.390,99.719,-35.781)
C2': (160.416,100.182,-37.917)
O2': (160.350,99.687,-39.243)
N1: (154.552,98.561,-38.070)
N2: (155.283,96.428,-38.465)
N3: (156.841,97.987,-37.797)
N7: (156.501,101.430,-36.883)
N9: (158.118,99.908,-37.054)
O5': (161.654,102.099,-35.234)
O3': (162.262,98.729,-37.750)
OP1: (152.573,97.610,-39.793)
OP2: (150.689,97.366,-41.527)
C3': (150.690,93.998,-37.697)
C1': (148.410,93.753,-37.162)
C5': (150.604,96.573,-37.771)
O4': (148.732,95.131,-37.181)
C8: (147.650,94.000,-39.609)
O2': (150.073,92.705,-35.772)
C6: (145.473,91.279,-40.130)
C5: (146.348,92.323,-39.772)
C4: (146.787,92.345,-38.460)
P: (151.136,97.552,-40.127)
C4': (150.172,95.293,-37.103)
C2': (149.728,92.983,-37.114)
C2: (145.618,90.551,-37.942)
N1: (145.118,90.397,-39.168)
N3: (146.455,91.479,-37.484)
N6: (144.987,91.102,-41.357)
N7: (146.894,93.377,-40.489)
N9: (147.649,93.412,-38.366)
O5': (150.501,96.453,-39.198)
O3': (152.004,93.716,-37.345)
Image (generated by PyMOL):
PyMOL image
show in jmol