Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1SJ4:R57:R55
Extra
PDB:
ATOM 1 O3' C A 56 48.444 57.547 82.459 1.00 80.05 O
ATOM 2 P C A 57 47.690 56.618 81.389 1.00 77.34 P
ATOM 3 OP1 C A 57 46.228 56.797 81.593 1.00 77.31 O
ATOM 4 OP2 C A 57 48.293 55.262 81.449 1.00 76.88 O
ATOM 5 O5' C A 57 48.052 57.257 79.983 1.00 75.11 O
ATOM 6 C5' C A 57 47.447 58.472 79.571 1.00 72.32 C
ATOM 7 C4' C A 57 47.992 58.880 78.234 1.00 70.61 C
ATOM 8 O4' C A 57 49.422 59.075 78.365 1.00 71.22 O
ATOM 9 C3' C A 57 47.842 57.846 77.130 1.00 68.43 C
ATOM 10 O3' C A 57 46.582 57.977 76.476 1.00 64.44 O
ATOM 11 C2' C A 57 48.997 58.182 76.197 1.00 69.65 C
ATOM 12 O2' C A 57 48.653 59.237 75.328 1.00 70.79 O
ATOM 13 C1' C A 57 50.068 58.679 77.174 1.00 70.75 C
ATOM 14 N1 C A 57 51.092 57.684 77.515 1.00 71.32 N
ATOM 15 C2 C A 57 52.019 57.319 76.544 1.00 71.86 C
ATOM 16 O2 C A 57 51.956 57.855 75.431 1.00 71.84 O
ATOM 17 N3 C A 57 52.962 56.392 76.840 1.00 73.65 N
ATOM 18 C4 C A 57 52.998 55.842 78.055 1.00 74.22 C
ATOM 19 N4 C A 57 53.943 54.929 78.304 1.00 74.77 N
ATOM 20 C5 C A 57 52.066 56.203 79.071 1.00 74.65 C
ATOM 21 C6 C A 57 51.137 57.122 78.759 1.00 73.76 C
ATOM 22 P G A 58 46.067 56.813 75.491 1.00 61.59 P
ATOM 23 OP1 G A 58 44.587 56.771 75.483 1.00 62.02 O
ATOM 24 OP2 G A 58 46.839 55.587 75.809 1.00 62.21 O
ATOM 25 O5' G A 58 46.509 57.298 74.049 1.00 60.60 O
TER
ATOM 1 O3' C B 54 54.239 49.164 86.633 1.00 62.05 O
ATOM 2 P U B 55 55.491 49.459 85.673 1.00 66.91 P
ATOM 3 OP1 U B 55 55.660 48.326 84.721 1.00 67.78 O
ATOM 4 OP2 U B 55 56.615 49.853 86.550 1.00 66.74 O
ATOM 5 O5' U B 55 55.053 50.758 84.860 1.00 71.60 O
ATOM 6 C5' U B 55 54.812 51.989 85.541 1.00 79.16 C
ATOM 7 C4' U B 55 54.516 53.094 84.553 1.00 83.86 C
ATOM 8 O4' U B 55 55.727 53.425 83.818 1.00 87.91 O
ATOM 9 C3' U B 55 53.436 52.795 83.518 1.00 85.38 C
ATOM 10 O3' U B 55 52.696 53.974 83.272 1.00 86.50 O
ATOM 11 C2' U B 55 54.236 52.477 82.254 1.00 87.78 C
ATOM 12 O2' U B 55 53.560 52.847 81.066 1.00 86.94 O
ATOM 13 C1' U B 55 55.474 53.357 82.428 1.00 89.71 C
ATOM 14 N1 U B 55 56.672 52.824 81.758 1.00 92.57 N
ATOM 15 C2 U B 55 57.239 53.590 80.748 1.00 94.11 C
ATOM 16 O2 U B 55 56.783 54.665 80.393 1.00 93.86 O
ATOM 17 N3 U B 55 58.360 53.046 80.169 1.00 95.60 N
ATOM 18 C4 U B 55 58.961 51.842 80.488 1.00 96.13 C
ATOM 19 O4 U B 55 59.986 51.495 79.886 1.00 96.77 O
ATOM 20 C5 U B 55 58.310 51.109 81.536 1.00 95.06 C
ATOM 21 C6 U B 55 57.217 51.613 82.119 1.00 92.90 C
ATOM 22 P C B 56 51.386 54.302 84.144 1.00 87.64 P
ATOM 23 OP1 C B 56 51.470 53.576 85.439 1.00 86.51 O
ATOM 24 OP2 C B 56 50.196 54.115 83.271 1.00 86.19 O
ATOM 25 O5' C B 56 51.566 55.861 84.417 1.00 87.56 O
TER
ATOM 2 P C A 57 47.690 56.618 81.389 1.00 77.34 P
ATOM 3 OP1 C A 57 46.228 56.797 81.593 1.00 77.31 O
ATOM 4 OP2 C A 57 48.293 55.262 81.449 1.00 76.88 O
ATOM 5 O5' C A 57 48.052 57.257 79.983 1.00 75.11 O
ATOM 6 C5' C A 57 47.447 58.472 79.571 1.00 72.32 C
ATOM 7 C4' C A 57 47.992 58.880 78.234 1.00 70.61 C
ATOM 8 O4' C A 57 49.422 59.075 78.365 1.00 71.22 O
ATOM 9 C3' C A 57 47.842 57.846 77.130 1.00 68.43 C
ATOM 10 O3' C A 57 46.582 57.977 76.476 1.00 64.44 O
ATOM 11 C2' C A 57 48.997 58.182 76.197 1.00 69.65 C
ATOM 12 O2' C A 57 48.653 59.237 75.328 1.00 70.79 O
ATOM 13 C1' C A 57 50.068 58.679 77.174 1.00 70.75 C
ATOM 14 N1 C A 57 51.092 57.684 77.515 1.00 71.32 N
ATOM 15 C2 C A 57 52.019 57.319 76.544 1.00 71.86 C
ATOM 16 O2 C A 57 51.956 57.855 75.431 1.00 71.84 O
ATOM 17 N3 C A 57 52.962 56.392 76.840 1.00 73.65 N
ATOM 18 C4 C A 57 52.998 55.842 78.055 1.00 74.22 C
ATOM 19 N4 C A 57 53.943 54.929 78.304 1.00 74.77 N
ATOM 20 C5 C A 57 52.066 56.203 79.071 1.00 74.65 C
ATOM 21 C6 C A 57 51.137 57.122 78.759 1.00 73.76 C
ATOM 22 P G A 58 46.067 56.813 75.491 1.00 61.59 P
ATOM 23 OP1 G A 58 44.587 56.771 75.483 1.00 62.02 O
ATOM 24 OP2 G A 58 46.839 55.587 75.809 1.00 62.21 O
ATOM 25 O5' G A 58 46.509 57.298 74.049 1.00 60.60 O
TER
ATOM 1 O3' C B 54 54.239 49.164 86.633 1.00 62.05 O
ATOM 2 P U B 55 55.491 49.459 85.673 1.00 66.91 P
ATOM 3 OP1 U B 55 55.660 48.326 84.721 1.00 67.78 O
ATOM 4 OP2 U B 55 56.615 49.853 86.550 1.00 66.74 O
ATOM 5 O5' U B 55 55.053 50.758 84.860 1.00 71.60 O
ATOM 6 C5' U B 55 54.812 51.989 85.541 1.00 79.16 C
ATOM 7 C4' U B 55 54.516 53.094 84.553 1.00 83.86 C
ATOM 8 O4' U B 55 55.727 53.425 83.818 1.00 87.91 O
ATOM 9 C3' U B 55 53.436 52.795 83.518 1.00 85.38 C
ATOM 10 O3' U B 55 52.696 53.974 83.272 1.00 86.50 O
ATOM 11 C2' U B 55 54.236 52.477 82.254 1.00 87.78 C
ATOM 12 O2' U B 55 53.560 52.847 81.066 1.00 86.94 O
ATOM 13 C1' U B 55 55.474 53.357 82.428 1.00 89.71 C
ATOM 14 N1 U B 55 56.672 52.824 81.758 1.00 92.57 N
ATOM 15 C2 U B 55 57.239 53.590 80.748 1.00 94.11 C
ATOM 16 O2 U B 55 56.783 54.665 80.393 1.00 93.86 O
ATOM 17 N3 U B 55 58.360 53.046 80.169 1.00 95.60 N
ATOM 18 C4 U B 55 58.961 51.842 80.488 1.00 96.13 C
ATOM 19 O4 U B 55 59.986 51.495 79.886 1.00 96.77 O
ATOM 20 C5 U B 55 58.310 51.109 81.536 1.00 95.06 C
ATOM 21 C6 U B 55 57.217 51.613 82.119 1.00 92.90 C
ATOM 22 P C B 56 51.386 54.302 84.144 1.00 87.64 P
ATOM 23 OP1 C B 56 51.470 53.576 85.439 1.00 86.51 O
ATOM 24 OP2 C B 56 50.196 54.115 83.271 1.00 86.19 O
ATOM 25 O5' C B 56 51.566 55.861 84.417 1.00 87.56 O
TER
Atoms:
C2: (52.019,57.319,76.544)
OP1: (46.228,56.797,81.593)
OP2: (48.293,55.262,81.449)
C4: (52.998,55.842,78.055)
O5': (48.052,57.257,79.983)
C3': (47.842,57.846,77.130)
C1': (50.068,58.679,77.174)
O4': (49.422,59.075,78.365)
C5': (47.447,58.472,79.571)
P: (47.690,56.618,81.389)
O2: (51.956,57.855,75.431)
C4': (47.992,58.880,78.234)
C2': (48.997,58.182,76.197)
O2': (48.653,59.237,75.328)
N1: (51.092,57.684,77.515)
N3: (52.962,56.392,76.840)
N4: (53.943,54.929,78.304)
C6: (51.137,57.122,78.759)
C5: (52.066,56.203,79.071)
O3': (46.582,57.977,76.476)
OP1: (46.228,56.797,81.593)
OP2: (48.293,55.262,81.449)
C4: (52.998,55.842,78.055)
O5': (48.052,57.257,79.983)
C3': (47.842,57.846,77.130)
C1': (50.068,58.679,77.174)
O4': (49.422,59.075,78.365)
C5': (47.447,58.472,79.571)
P: (47.690,56.618,81.389)
O2: (51.956,57.855,75.431)
C4': (47.992,58.880,78.234)
C2': (48.997,58.182,76.197)
O2': (48.653,59.237,75.328)
N1: (51.092,57.684,77.515)
N3: (52.962,56.392,76.840)
N4: (53.943,54.929,78.304)
C6: (51.137,57.122,78.759)
C5: (52.066,56.203,79.071)
O3': (46.582,57.977,76.476)
C4: (58.961,51.842,80.488)
N3: (58.360,53.046,80.169)
OP1: (55.660,48.326,84.721)
OP2: (56.615,49.853,86.550)
C2: (57.239,53.590,80.748)
C1': (55.474,53.357,82.428)
C3': (53.436,52.795,83.518)
O5': (55.053,50.758,84.860)
O4': (55.727,53.425,83.818)
C5': (54.812,51.989,85.541)
P: (55.491,49.459,85.673)
C4': (54.516,53.094,84.553)
C2': (54.236,52.477,82.254)
O2': (53.560,52.847,81.066)
N1: (56.672,52.824,81.758)
O4: (59.986,51.495,79.886)
O2: (56.783,54.665,80.393)
C6: (57.217,51.613,82.119)
C5: (58.310,51.109,81.536)
O3': (52.696,53.974,83.272)
N3: (58.360,53.046,80.169)
OP1: (55.660,48.326,84.721)
OP2: (56.615,49.853,86.550)
C2: (57.239,53.590,80.748)
C1': (55.474,53.357,82.428)
C3': (53.436,52.795,83.518)
O5': (55.053,50.758,84.860)
O4': (55.727,53.425,83.818)
C5': (54.812,51.989,85.541)
P: (55.491,49.459,85.673)
C4': (54.516,53.094,84.553)
C2': (54.236,52.477,82.254)
O2': (53.560,52.847,81.066)
N1: (56.672,52.824,81.758)
O4: (59.986,51.495,79.886)
O2: (56.783,54.665,80.393)
C6: (57.217,51.613,82.119)
C5: (58.310,51.109,81.536)
O3': (52.696,53.974,83.272)
Image (generated by PyMOL):