Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:A85:A90
Extra
PDB:
ATOM 1 O3' C A 84 6.436 29.616 14.484 1.00 16.96 O
ATOM 2 P G A 85 5.045 29.162 13.815 1.00 19.21 P
ATOM 3 OP1 G A 85 4.333 28.379 14.842 1.00 15.79 O
ATOM 4 OP2 G A 85 5.406 28.486 12.559 1.00 15.07 O
ATOM 5 O5' G A 85 4.272 30.489 13.498 1.00 16.89 O
ATOM 6 C5' G A 85 3.636 31.242 14.522 1.00 17.29 C
ATOM 7 C4' G A 85 2.913 32.402 13.899 1.00 17.24 C
ATOM 8 O4' G A 85 3.877 33.314 13.318 1.00 18.35 O
ATOM 9 C3' G A 85 2.002 32.046 12.735 1.00 19.02 C
ATOM 10 O3' G A 85 0.734 31.518 13.134 1.00 16.48 O
ATOM 11 C2' G A 85 1.930 33.377 11.994 1.00 15.97 C
ATOM 12 O2' G A 85 0.972 34.239 12.586 1.00 19.73 O
ATOM 13 C1' G A 85 3.353 33.928 12.159 1.00 18.97 C
ATOM 14 N9 G A 85 4.068 33.486 10.951 1.00 17.01 N
ATOM 15 C8 G A 85 4.755 32.316 10.753 1.00 16.56 C
ATOM 16 N7 G A 85 5.161 32.171 9.517 1.00 18.37 N
ATOM 17 C5 G A 85 4.693 33.296 8.865 1.00 18.89 C
ATOM 18 C6 G A 85 4.825 33.686 7.510 1.00 21.29 C
ATOM 19 O6 G A 85 5.404 33.079 6.602 1.00 20.73 O
ATOM 20 N1 G A 85 4.211 34.908 7.276 1.00 17.68 N
ATOM 21 C2 G A 85 3.534 35.659 8.206 1.00 18.96 C
ATOM 22 N2 G A 85 3.010 36.811 7.757 1.00 17.99 N
ATOM 23 N3 G A 85 3.395 35.306 9.480 1.00 16.89 N
ATOM 24 C4 G A 85 4.005 34.123 9.731 1.00 19.54 C
ATOM 25 P A A 86 -0.178 30.609 12.133 1.00 18.54 P
ATOM 26 OP1 A A 86 -0.560 31.436 10.956 1.00 22.70 O
ATOM 27 OP2 A A 86 -1.260 30.078 13.006 1.00 18.16 O
ATOM 28 O5' A A 86 0.763 29.440 11.631 1.00 20.36 O
TER
ATOM 1 O3' U B 89 2.448 34.171 3.321 1.00 23.26 O
ATOM 2 P A B 90 3.105 35.594 3.697 1.00 24.29 P
ATOM 3 OP1 A B 90 3.441 36.203 2.395 1.00 26.11 O
ATOM 4 OP2 A B 90 4.200 35.424 4.707 1.00 22.65 O
ATOM 5 O5' A B 90 1.904 36.393 4.325 1.00 22.51 O
ATOM 6 C5' A B 90 0.766 36.648 3.526 1.00 23.02 C
ATOM 7 C4' A B 90 -0.159 37.629 4.189 1.00 26.24 C
ATOM 8 O4' A B 90 -0.938 36.961 5.210 1.00 22.26 O
ATOM 9 C3' A B 90 0.479 38.787 4.941 1.00 22.10 C
ATOM 10 O3' A B 90 0.983 39.808 4.098 1.00 23.45 O
ATOM 11 C2' A B 90 -0.672 39.252 5.820 1.00 22.26 C
ATOM 12 O2' A B 90 -1.597 40.007 5.043 1.00 23.78 O
ATOM 13 C1' A B 90 -1.324 37.917 6.174 1.00 21.09 C
ATOM 14 N9 A B 90 -1.005 37.398 7.521 1.00 20.50 N
ATOM 15 C8 A B 90 -0.265 36.279 7.833 1.00 19.73 C
ATOM 16 N7 A B 90 -0.200 36.034 9.126 1.00 19.19 N
ATOM 17 C5 A B 90 -0.953 37.057 9.688 1.00 18.45 C
ATOM 18 C6 A B 90 -1.279 37.355 11.020 1.00 18.63 C
ATOM 19 N6 A B 90 -0.846 36.622 12.061 1.00 15.14 N
ATOM 20 N1 A B 90 -2.076 38.440 11.245 1.00 20.34 N
ATOM 21 C2 A B 90 -2.502 39.179 10.198 1.00 20.26 C
ATOM 22 N3 A B 90 -2.255 38.988 8.892 1.00 20.05 N
ATOM 23 C4 A B 90 -1.466 37.903 8.707 1.00 18.97 C
ATOM 24 P A B 91 2.233 40.656 4.628 1.00 24.27 P
ATOM 25 OP1 A B 91 2.630 41.543 3.504 1.00 28.84 O
ATOM 26 OP2 A B 91 3.210 39.697 5.212 1.00 25.82 O
ATOM 27 O5' A B 91 1.616 41.502 5.825 1.00 21.23 O
TER
ATOM 2 P G A 85 5.045 29.162 13.815 1.00 19.21 P
ATOM 3 OP1 G A 85 4.333 28.379 14.842 1.00 15.79 O
ATOM 4 OP2 G A 85 5.406 28.486 12.559 1.00 15.07 O
ATOM 5 O5' G A 85 4.272 30.489 13.498 1.00 16.89 O
ATOM 6 C5' G A 85 3.636 31.242 14.522 1.00 17.29 C
ATOM 7 C4' G A 85 2.913 32.402 13.899 1.00 17.24 C
ATOM 8 O4' G A 85 3.877 33.314 13.318 1.00 18.35 O
ATOM 9 C3' G A 85 2.002 32.046 12.735 1.00 19.02 C
ATOM 10 O3' G A 85 0.734 31.518 13.134 1.00 16.48 O
ATOM 11 C2' G A 85 1.930 33.377 11.994 1.00 15.97 C
ATOM 12 O2' G A 85 0.972 34.239 12.586 1.00 19.73 O
ATOM 13 C1' G A 85 3.353 33.928 12.159 1.00 18.97 C
ATOM 14 N9 G A 85 4.068 33.486 10.951 1.00 17.01 N
ATOM 15 C8 G A 85 4.755 32.316 10.753 1.00 16.56 C
ATOM 16 N7 G A 85 5.161 32.171 9.517 1.00 18.37 N
ATOM 17 C5 G A 85 4.693 33.296 8.865 1.00 18.89 C
ATOM 18 C6 G A 85 4.825 33.686 7.510 1.00 21.29 C
ATOM 19 O6 G A 85 5.404 33.079 6.602 1.00 20.73 O
ATOM 20 N1 G A 85 4.211 34.908 7.276 1.00 17.68 N
ATOM 21 C2 G A 85 3.534 35.659 8.206 1.00 18.96 C
ATOM 22 N2 G A 85 3.010 36.811 7.757 1.00 17.99 N
ATOM 23 N3 G A 85 3.395 35.306 9.480 1.00 16.89 N
ATOM 24 C4 G A 85 4.005 34.123 9.731 1.00 19.54 C
ATOM 25 P A A 86 -0.178 30.609 12.133 1.00 18.54 P
ATOM 26 OP1 A A 86 -0.560 31.436 10.956 1.00 22.70 O
ATOM 27 OP2 A A 86 -1.260 30.078 13.006 1.00 18.16 O
ATOM 28 O5' A A 86 0.763 29.440 11.631 1.00 20.36 O
TER
ATOM 1 O3' U B 89 2.448 34.171 3.321 1.00 23.26 O
ATOM 2 P A B 90 3.105 35.594 3.697 1.00 24.29 P
ATOM 3 OP1 A B 90 3.441 36.203 2.395 1.00 26.11 O
ATOM 4 OP2 A B 90 4.200 35.424 4.707 1.00 22.65 O
ATOM 5 O5' A B 90 1.904 36.393 4.325 1.00 22.51 O
ATOM 6 C5' A B 90 0.766 36.648 3.526 1.00 23.02 C
ATOM 7 C4' A B 90 -0.159 37.629 4.189 1.00 26.24 C
ATOM 8 O4' A B 90 -0.938 36.961 5.210 1.00 22.26 O
ATOM 9 C3' A B 90 0.479 38.787 4.941 1.00 22.10 C
ATOM 10 O3' A B 90 0.983 39.808 4.098 1.00 23.45 O
ATOM 11 C2' A B 90 -0.672 39.252 5.820 1.00 22.26 C
ATOM 12 O2' A B 90 -1.597 40.007 5.043 1.00 23.78 O
ATOM 13 C1' A B 90 -1.324 37.917 6.174 1.00 21.09 C
ATOM 14 N9 A B 90 -1.005 37.398 7.521 1.00 20.50 N
ATOM 15 C8 A B 90 -0.265 36.279 7.833 1.00 19.73 C
ATOM 16 N7 A B 90 -0.200 36.034 9.126 1.00 19.19 N
ATOM 17 C5 A B 90 -0.953 37.057 9.688 1.00 18.45 C
ATOM 18 C6 A B 90 -1.279 37.355 11.020 1.00 18.63 C
ATOM 19 N6 A B 90 -0.846 36.622 12.061 1.00 15.14 N
ATOM 20 N1 A B 90 -2.076 38.440 11.245 1.00 20.34 N
ATOM 21 C2 A B 90 -2.502 39.179 10.198 1.00 20.26 C
ATOM 22 N3 A B 90 -2.255 38.988 8.892 1.00 20.05 N
ATOM 23 C4 A B 90 -1.466 37.903 8.707 1.00 18.97 C
ATOM 24 P A B 91 2.233 40.656 4.628 1.00 24.27 P
ATOM 25 OP1 A B 91 2.630 41.543 3.504 1.00 28.84 O
ATOM 26 OP2 A B 91 3.210 39.697 5.212 1.00 25.82 O
ATOM 27 O5' A B 91 1.616 41.502 5.825 1.00 21.23 O
TER
Atoms:
OP1: (4.333,28.379,14.842)
OP2: (5.406,28.486,12.559)
C3': (2.002,32.046,12.735)
C1': (3.353,33.928,12.159)
C5': (3.636,31.242,14.522)
O6: (5.404,33.079,6.602)
O4': (3.877,33.314,13.318)
C8: (4.755,32.316,10.753)
C2: (3.534,35.659,8.206)
C6: (4.825,33.686,7.510)
C5: (4.693,33.296,8.865)
C4: (4.005,34.123,9.731)
P: (5.045,29.162,13.815)
C4': (2.913,32.402,13.899)
C2': (1.930,33.377,11.994)
O2': (0.972,34.239,12.586)
N1: (4.211,34.908,7.276)
N2: (3.010,36.811,7.757)
N3: (3.395,35.306,9.480)
N7: (5.161,32.171,9.517)
N9: (4.068,33.486,10.951)
O5': (4.272,30.489,13.498)
O3': (0.734,31.518,13.134)
OP2: (5.406,28.486,12.559)
C3': (2.002,32.046,12.735)
C1': (3.353,33.928,12.159)
C5': (3.636,31.242,14.522)
O6: (5.404,33.079,6.602)
O4': (3.877,33.314,13.318)
C8: (4.755,32.316,10.753)
C2: (3.534,35.659,8.206)
C6: (4.825,33.686,7.510)
C5: (4.693,33.296,8.865)
C4: (4.005,34.123,9.731)
P: (5.045,29.162,13.815)
C4': (2.913,32.402,13.899)
C2': (1.930,33.377,11.994)
O2': (0.972,34.239,12.586)
N1: (4.211,34.908,7.276)
N2: (3.010,36.811,7.757)
N3: (3.395,35.306,9.480)
N7: (5.161,32.171,9.517)
N9: (4.068,33.486,10.951)
O5': (4.272,30.489,13.498)
O3': (0.734,31.518,13.134)
OP1: (3.441,36.203,2.395)
OP2: (4.200,35.424,4.707)
C3': (0.479,38.787,4.941)
C1': (-1.324,37.917,6.174)
C5': (0.766,36.648,3.526)
O4': (-0.938,36.961,5.210)
C8: (-0.265,36.279,7.833)
O2': (-1.597,40.007,5.043)
C6: (-1.279,37.355,11.020)
C5: (-0.953,37.057,9.688)
C4: (-1.466,37.903,8.707)
P: (3.105,35.594,3.697)
C4': (-0.159,37.629,4.189)
C2': (-0.672,39.252,5.820)
C2: (-2.502,39.179,10.198)
N1: (-2.076,38.440,11.245)
N3: (-2.255,38.988,8.892)
N6: (-0.846,36.622,12.061)
N7: (-0.200,36.034,9.126)
N9: (-1.005,37.398,7.521)
O5': (1.904,36.393,4.325)
O3': (0.983,39.808,4.098)
OP2: (4.200,35.424,4.707)
C3': (0.479,38.787,4.941)
C1': (-1.324,37.917,6.174)
C5': (0.766,36.648,3.526)
O4': (-0.938,36.961,5.210)
C8: (-0.265,36.279,7.833)
O2': (-1.597,40.007,5.043)
C6: (-1.279,37.355,11.020)
C5: (-0.953,37.057,9.688)
C4: (-1.466,37.903,8.707)
P: (3.105,35.594,3.697)
C4': (-0.159,37.629,4.189)
C2': (-0.672,39.252,5.820)
C2: (-2.502,39.179,10.198)
N1: (-2.076,38.440,11.245)
N3: (-2.255,38.988,8.892)
N6: (-0.846,36.622,12.061)
N7: (-0.200,36.034,9.126)
N9: (-1.005,37.398,7.521)
O5': (1.904,36.393,4.325)
O3': (0.983,39.808,4.098)
Image (generated by PyMOL):