Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11180:11188
Extra
PDB:
ATOM 1 O3' U A1179 -14.360 -3.013 -32.961 1.00212.74 O
ATOM 2 P G A1180 -15.271 -1.684 -33.100 1.00233.37 P
ATOM 3 OP1 G A1180 -16.024 -1.790 -34.373 1.00233.96 O
ATOM 4 OP2 G A1180 -14.382 -0.514 -32.899 1.00232.56 O
ATOM 5 O5' G A1180 -16.266 -1.823 -31.865 1.00234.17 O
ATOM 6 C5' G A1180 -16.871 -3.077 -31.559 1.00234.77 C
ATOM 7 C4' G A1180 -16.631 -3.488 -30.129 1.00234.63 C
ATOM 8 O4' G A1180 -17.562 -2.766 -29.283 1.00235.30 O
ATOM 9 C3' G A1180 -16.867 -4.969 -29.830 1.00234.96 C
ATOM 10 O3' G A1180 -16.074 -5.349 -28.695 1.00234.38 O
ATOM 11 C2' G A1180 -18.346 -4.974 -29.453 1.00236.13 C
ATOM 12 O2' G A1180 -18.761 -6.088 -28.694 1.00236.57 O
ATOM 13 C1' G A1180 -18.450 -3.677 -28.659 1.00236.09 C
ATOM 14 N9 G A1180 -19.785 -3.076 -28.649 1.00237.09 N
ATOM 15 C8 G A1180 -20.672 -2.877 -29.680 1.00237.76 C
ATOM 16 N7 G A1180 -21.775 -2.288 -29.284 1.00238.58 N
ATOM 17 C5 G A1180 -21.603 -2.081 -27.915 1.00238.44 C
ATOM 18 C6 G A1180 -22.436 -1.490 -26.916 1.00239.05 C
ATOM 19 O6 G A1180 -23.567 -0.997 -27.030 1.00239.90 O
ATOM 20 N1 G A1180 -21.831 -1.503 -25.657 1.00238.59 N
ATOM 21 C2 G A1180 -20.589 -2.022 -25.389 1.00237.66 C
ATOM 22 N2 G A1180 -20.133 -1.955 -24.135 1.00237.30 N
ATOM 23 N3 G A1180 -19.823 -2.568 -26.305 1.00237.09 N
ATOM 24 C4 G A1180 -20.377 -2.563 -27.527 1.00237.52 C
ATOM 25 P G A1181 -15.691 -6.895 -28.418 1.00240.19 P
ATOM 26 OP1 G A1181 -15.956 -7.157 -26.979 1.00240.44 O
ATOM 27 OP2 G A1181 -14.315 -7.105 -28.933 1.00239.12 O
ATOM 28 O5' G A1181 -16.736 -7.700 -29.317 1.00241.09 O
TER
ATOM 1 O3' G B1187 -25.205 -0.268 -21.984 1.00296.84 O
ATOM 2 P A B1188 -24.505 -1.639 -22.492 1.00323.87 P
ATOM 3 OP1 A B1188 -24.369 -1.540 -23.968 1.00323.74 O
ATOM 4 OP2 A B1188 -25.286 -2.768 -21.927 1.00324.61 O
ATOM 5 O5' A B1188 -23.060 -1.586 -21.812 1.00322.73 O
ATOM 6 C5' A B1188 -22.436 -2.775 -21.324 1.00322.36 C
ATOM 7 C4' A B1188 -20.928 -2.670 -21.323 1.00321.15 C
ATOM 8 O4' A B1188 -20.527 -1.470 -20.607 1.00320.73 O
ATOM 9 C3' A B1188 -20.189 -3.831 -20.653 1.00320.69 C
ATOM 10 O3' A B1188 -18.945 -4.054 -21.324 1.00319.71 O
ATOM 11 C2' A B1188 -19.921 -3.283 -19.257 1.00320.44 C
ATOM 12 O2' A B1188 -18.845 -3.895 -18.579 1.00319.65 O
ATOM 13 C1' A B1188 -19.637 -1.818 -19.566 1.00320.07 C
ATOM 14 N9 A B1188 -19.870 -0.913 -18.442 1.00320.19 N
ATOM 15 C8 A B1188 -20.804 -1.020 -17.442 1.00320.95 C
ATOM 16 N7 A B1188 -20.752 -0.037 -16.577 1.00320.83 N
ATOM 17 C5 A B1188 -19.717 0.764 -17.041 1.00319.93 C
ATOM 18 C6 A B1188 -19.163 1.962 -16.564 1.00319.39 C
ATOM 19 N6 A B1188 -19.600 2.582 -15.468 1.00319.70 N
ATOM 20 N1 A B1188 -18.138 2.503 -17.260 1.00318.52 N
ATOM 21 C2 A B1188 -17.703 1.874 -18.360 1.00318.22 C
ATOM 22 N3 A B1188 -18.143 0.743 -18.908 1.00318.66 N
ATOM 23 C4 A B1188 -19.162 0.235 -18.189 1.00319.52 C
ATOM 24 P A B1189 -18.743 -5.352 -22.253 1.00246.69 P
ATOM 25 OP1 A B1189 -20.086 -5.927 -22.494 1.00247.81 O
ATOM 26 OP2 A B1189 -17.715 -6.203 -21.604 1.00245.97 O
ATOM 27 O5' A B1189 -18.166 -4.735 -23.611 1.00246.16 O
TER
ATOM 2 P G A1180 -15.271 -1.684 -33.100 1.00233.37 P
ATOM 3 OP1 G A1180 -16.024 -1.790 -34.373 1.00233.96 O
ATOM 4 OP2 G A1180 -14.382 -0.514 -32.899 1.00232.56 O
ATOM 5 O5' G A1180 -16.266 -1.823 -31.865 1.00234.17 O
ATOM 6 C5' G A1180 -16.871 -3.077 -31.559 1.00234.77 C
ATOM 7 C4' G A1180 -16.631 -3.488 -30.129 1.00234.63 C
ATOM 8 O4' G A1180 -17.562 -2.766 -29.283 1.00235.30 O
ATOM 9 C3' G A1180 -16.867 -4.969 -29.830 1.00234.96 C
ATOM 10 O3' G A1180 -16.074 -5.349 -28.695 1.00234.38 O
ATOM 11 C2' G A1180 -18.346 -4.974 -29.453 1.00236.13 C
ATOM 12 O2' G A1180 -18.761 -6.088 -28.694 1.00236.57 O
ATOM 13 C1' G A1180 -18.450 -3.677 -28.659 1.00236.09 C
ATOM 14 N9 G A1180 -19.785 -3.076 -28.649 1.00237.09 N
ATOM 15 C8 G A1180 -20.672 -2.877 -29.680 1.00237.76 C
ATOM 16 N7 G A1180 -21.775 -2.288 -29.284 1.00238.58 N
ATOM 17 C5 G A1180 -21.603 -2.081 -27.915 1.00238.44 C
ATOM 18 C6 G A1180 -22.436 -1.490 -26.916 1.00239.05 C
ATOM 19 O6 G A1180 -23.567 -0.997 -27.030 1.00239.90 O
ATOM 20 N1 G A1180 -21.831 -1.503 -25.657 1.00238.59 N
ATOM 21 C2 G A1180 -20.589 -2.022 -25.389 1.00237.66 C
ATOM 22 N2 G A1180 -20.133 -1.955 -24.135 1.00237.30 N
ATOM 23 N3 G A1180 -19.823 -2.568 -26.305 1.00237.09 N
ATOM 24 C4 G A1180 -20.377 -2.563 -27.527 1.00237.52 C
ATOM 25 P G A1181 -15.691 -6.895 -28.418 1.00240.19 P
ATOM 26 OP1 G A1181 -15.956 -7.157 -26.979 1.00240.44 O
ATOM 27 OP2 G A1181 -14.315 -7.105 -28.933 1.00239.12 O
ATOM 28 O5' G A1181 -16.736 -7.700 -29.317 1.00241.09 O
TER
ATOM 1 O3' G B1187 -25.205 -0.268 -21.984 1.00296.84 O
ATOM 2 P A B1188 -24.505 -1.639 -22.492 1.00323.87 P
ATOM 3 OP1 A B1188 -24.369 -1.540 -23.968 1.00323.74 O
ATOM 4 OP2 A B1188 -25.286 -2.768 -21.927 1.00324.61 O
ATOM 5 O5' A B1188 -23.060 -1.586 -21.812 1.00322.73 O
ATOM 6 C5' A B1188 -22.436 -2.775 -21.324 1.00322.36 C
ATOM 7 C4' A B1188 -20.928 -2.670 -21.323 1.00321.15 C
ATOM 8 O4' A B1188 -20.527 -1.470 -20.607 1.00320.73 O
ATOM 9 C3' A B1188 -20.189 -3.831 -20.653 1.00320.69 C
ATOM 10 O3' A B1188 -18.945 -4.054 -21.324 1.00319.71 O
ATOM 11 C2' A B1188 -19.921 -3.283 -19.257 1.00320.44 C
ATOM 12 O2' A B1188 -18.845 -3.895 -18.579 1.00319.65 O
ATOM 13 C1' A B1188 -19.637 -1.818 -19.566 1.00320.07 C
ATOM 14 N9 A B1188 -19.870 -0.913 -18.442 1.00320.19 N
ATOM 15 C8 A B1188 -20.804 -1.020 -17.442 1.00320.95 C
ATOM 16 N7 A B1188 -20.752 -0.037 -16.577 1.00320.83 N
ATOM 17 C5 A B1188 -19.717 0.764 -17.041 1.00319.93 C
ATOM 18 C6 A B1188 -19.163 1.962 -16.564 1.00319.39 C
ATOM 19 N6 A B1188 -19.600 2.582 -15.468 1.00319.70 N
ATOM 20 N1 A B1188 -18.138 2.503 -17.260 1.00318.52 N
ATOM 21 C2 A B1188 -17.703 1.874 -18.360 1.00318.22 C
ATOM 22 N3 A B1188 -18.143 0.743 -18.908 1.00318.66 N
ATOM 23 C4 A B1188 -19.162 0.235 -18.189 1.00319.52 C
ATOM 24 P A B1189 -18.743 -5.352 -22.253 1.00246.69 P
ATOM 25 OP1 A B1189 -20.086 -5.927 -22.494 1.00247.81 O
ATOM 26 OP2 A B1189 -17.715 -6.203 -21.604 1.00245.97 O
ATOM 27 O5' A B1189 -18.166 -4.735 -23.611 1.00246.16 O
TER
Atoms:
OP1: (-16.024,-1.790,-34.373)
OP2: (-14.382,-0.514,-32.899)
C3': (-16.867,-4.969,-29.830)
C1': (-18.450,-3.677,-28.659)
C5': (-16.871,-3.077,-31.559)
O6: (-23.567,-0.997,-27.030)
O4': (-17.562,-2.766,-29.283)
C8: (-20.672,-2.877,-29.680)
C2: (-20.589,-2.022,-25.389)
C6: (-22.436,-1.490,-26.916)
C5: (-21.603,-2.081,-27.915)
C4: (-20.377,-2.563,-27.527)
P: (-15.271,-1.684,-33.100)
C4': (-16.631,-3.488,-30.129)
C2': (-18.346,-4.974,-29.453)
O2': (-18.761,-6.088,-28.694)
N1: (-21.831,-1.503,-25.657)
N2: (-20.133,-1.955,-24.135)
N3: (-19.823,-2.568,-26.305)
N7: (-21.775,-2.288,-29.284)
N9: (-19.785,-3.076,-28.649)
O5': (-16.266,-1.823,-31.865)
O3': (-16.074,-5.349,-28.695)
OP2: (-14.382,-0.514,-32.899)
C3': (-16.867,-4.969,-29.830)
C1': (-18.450,-3.677,-28.659)
C5': (-16.871,-3.077,-31.559)
O6: (-23.567,-0.997,-27.030)
O4': (-17.562,-2.766,-29.283)
C8: (-20.672,-2.877,-29.680)
C2: (-20.589,-2.022,-25.389)
C6: (-22.436,-1.490,-26.916)
C5: (-21.603,-2.081,-27.915)
C4: (-20.377,-2.563,-27.527)
P: (-15.271,-1.684,-33.100)
C4': (-16.631,-3.488,-30.129)
C2': (-18.346,-4.974,-29.453)
O2': (-18.761,-6.088,-28.694)
N1: (-21.831,-1.503,-25.657)
N2: (-20.133,-1.955,-24.135)
N3: (-19.823,-2.568,-26.305)
N7: (-21.775,-2.288,-29.284)
N9: (-19.785,-3.076,-28.649)
O5': (-16.266,-1.823,-31.865)
O3': (-16.074,-5.349,-28.695)
OP1: (-24.369,-1.540,-23.968)
OP2: (-25.286,-2.768,-21.927)
C3': (-20.189,-3.831,-20.653)
C1': (-19.637,-1.818,-19.566)
C5': (-22.436,-2.775,-21.324)
O4': (-20.527,-1.470,-20.607)
C8: (-20.804,-1.020,-17.442)
O2': (-18.845,-3.895,-18.579)
C6: (-19.163,1.962,-16.564)
C5: (-19.717,0.764,-17.041)
C4: (-19.162,0.235,-18.189)
P: (-24.505,-1.639,-22.492)
C4': (-20.928,-2.670,-21.323)
C2': (-19.921,-3.283,-19.257)
C2: (-17.703,1.874,-18.360)
N1: (-18.138,2.503,-17.260)
N3: (-18.143,0.743,-18.908)
N6: (-19.600,2.582,-15.468)
N7: (-20.752,-0.037,-16.577)
N9: (-19.870,-0.913,-18.442)
O5': (-23.060,-1.586,-21.812)
O3': (-18.945,-4.054,-21.324)
OP2: (-25.286,-2.768,-21.927)
C3': (-20.189,-3.831,-20.653)
C1': (-19.637,-1.818,-19.566)
C5': (-22.436,-2.775,-21.324)
O4': (-20.527,-1.470,-20.607)
C8: (-20.804,-1.020,-17.442)
O2': (-18.845,-3.895,-18.579)
C6: (-19.163,1.962,-16.564)
C5: (-19.717,0.764,-17.041)
C4: (-19.162,0.235,-18.189)
P: (-24.505,-1.639,-22.492)
C4': (-20.928,-2.670,-21.323)
C2': (-19.921,-3.283,-19.257)
C2: (-17.703,1.874,-18.360)
N1: (-18.138,2.503,-17.260)
N3: (-18.143,0.743,-18.908)
N6: (-19.600,2.582,-15.468)
N7: (-20.752,-0.037,-16.577)
N9: (-19.870,-0.913,-18.442)
O5': (-23.060,-1.586,-21.812)
O3': (-18.945,-4.054,-21.324)
Image (generated by PyMOL):