Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VBX:B57:B55
Extra
PDB:
ATOM 1 O3' C A 56 48.197 57.506 82.244 1.00 74.54 O
ATOM 2 P C A 57 47.458 56.745 81.051 1.00 71.25 P
ATOM 3 OP1 C A 57 46.001 57.011 81.165 1.00 70.53 O
ATOM 4 OP2 C A 57 47.964 55.355 81.059 1.00 71.15 O
ATOM 5 O5' C A 57 47.989 57.461 79.738 1.00 69.99 O
ATOM 6 C5' C A 57 47.345 58.626 79.242 1.00 69.27 C
ATOM 7 C4' C A 57 47.835 58.924 77.857 1.00 67.76 C
ATOM 8 O4' C A 57 49.256 59.163 77.933 1.00 68.83 O
ATOM 9 C3' C A 57 47.658 57.776 76.877 1.00 66.61 C
ATOM 10 O3' C A 57 46.379 57.902 76.243 1.00 64.00 O
ATOM 11 C2' C A 57 48.815 57.977 75.908 1.00 67.96 C
ATOM 12 O2' C A 57 48.488 58.851 74.852 1.00 70.65 O
ATOM 13 C1' C A 57 49.889 58.613 76.800 1.00 69.37 C
ATOM 14 N1 C A 57 50.907 57.673 77.276 1.00 70.50 N
ATOM 15 C2 C A 57 51.913 57.286 76.409 1.00 71.56 C
ATOM 16 O2 C A 57 51.926 57.764 75.266 1.00 72.27 O
ATOM 17 N3 C A 57 52.853 56.406 76.834 1.00 72.28 N
ATOM 18 C4 C A 57 52.798 55.929 78.079 1.00 73.01 C
ATOM 19 N4 C A 57 53.736 55.058 78.461 1.00 73.85 N
ATOM 20 C5 C A 57 51.781 56.319 78.991 1.00 72.70 C
ATOM 21 C6 C A 57 50.860 57.183 78.548 1.00 71.75 C
ATOM 22 P G A 58 45.913 56.845 75.119 1.00 61.26 P
ATOM 23 OP1 G A 58 44.428 56.861 74.975 1.00 59.57 O
ATOM 24 OP2 G A 58 46.618 55.577 75.416 1.00 62.68 O
ATOM 25 O5' G A 58 46.508 57.416 73.765 1.00 60.02 O
TER
ATOM 1 O3' C B 54 54.254 49.200 86.476 1.00 59.30 O
ATOM 2 P U B 55 55.402 49.565 85.423 1.00 64.81 P
ATOM 3 OP1 U B 55 55.494 48.472 84.421 1.00 66.15 O
ATOM 4 OP2 U B 55 56.590 49.935 86.214 1.00 64.98 O
ATOM 5 O5' U B 55 54.865 50.874 84.697 1.00 69.06 O
ATOM 6 C5' U B 55 54.734 52.107 85.401 1.00 75.76 C
ATOM 7 C4' U B 55 54.405 53.224 84.432 1.00 80.40 C
ATOM 8 O4' U B 55 55.588 53.603 83.672 1.00 83.15 O
ATOM 9 C3' U B 55 53.314 52.890 83.414 1.00 82.05 C
ATOM 10 O3' U B 55 52.514 54.028 83.174 1.00 83.58 O
ATOM 11 C2' U B 55 54.094 52.599 82.135 1.00 83.55 C
ATOM 12 O2' U B 55 53.370 52.955 80.973 1.00 82.65 O
ATOM 13 C1' U B 55 55.311 53.514 82.285 1.00 85.18 C
ATOM 14 N1 U B 55 56.507 53.002 81.595 1.00 86.98 N
ATOM 15 C2 U B 55 57.062 53.792 80.606 1.00 87.29 C
ATOM 16 O2 U B 55 56.601 54.871 80.285 1.00 86.76 O
ATOM 17 N3 U B 55 58.173 53.269 80.001 1.00 88.39 N
ATOM 18 C4 U B 55 58.775 52.059 80.272 1.00 89.96 C
ATOM 19 O4 U B 55 59.781 51.731 79.639 1.00 91.92 O
ATOM 20 C5 U B 55 58.143 51.293 81.303 1.00 89.20 C
ATOM 21 C6 U B 55 57.060 51.780 81.917 1.00 88.21 C
ATOM 22 P C B 56 51.303 54.378 84.163 1.00 83.86 P
ATOM 23 OP1 C B 56 51.610 53.823 85.508 1.00 84.09 O
ATOM 24 OP2 C B 56 50.046 53.988 83.476 1.00 83.16 O
ATOM 25 O5' C B 56 51.389 55.969 84.215 1.00 84.44 O
TER
ATOM 2 P C A 57 47.458 56.745 81.051 1.00 71.25 P
ATOM 3 OP1 C A 57 46.001 57.011 81.165 1.00 70.53 O
ATOM 4 OP2 C A 57 47.964 55.355 81.059 1.00 71.15 O
ATOM 5 O5' C A 57 47.989 57.461 79.738 1.00 69.99 O
ATOM 6 C5' C A 57 47.345 58.626 79.242 1.00 69.27 C
ATOM 7 C4' C A 57 47.835 58.924 77.857 1.00 67.76 C
ATOM 8 O4' C A 57 49.256 59.163 77.933 1.00 68.83 O
ATOM 9 C3' C A 57 47.658 57.776 76.877 1.00 66.61 C
ATOM 10 O3' C A 57 46.379 57.902 76.243 1.00 64.00 O
ATOM 11 C2' C A 57 48.815 57.977 75.908 1.00 67.96 C
ATOM 12 O2' C A 57 48.488 58.851 74.852 1.00 70.65 O
ATOM 13 C1' C A 57 49.889 58.613 76.800 1.00 69.37 C
ATOM 14 N1 C A 57 50.907 57.673 77.276 1.00 70.50 N
ATOM 15 C2 C A 57 51.913 57.286 76.409 1.00 71.56 C
ATOM 16 O2 C A 57 51.926 57.764 75.266 1.00 72.27 O
ATOM 17 N3 C A 57 52.853 56.406 76.834 1.00 72.28 N
ATOM 18 C4 C A 57 52.798 55.929 78.079 1.00 73.01 C
ATOM 19 N4 C A 57 53.736 55.058 78.461 1.00 73.85 N
ATOM 20 C5 C A 57 51.781 56.319 78.991 1.00 72.70 C
ATOM 21 C6 C A 57 50.860 57.183 78.548 1.00 71.75 C
ATOM 22 P G A 58 45.913 56.845 75.119 1.00 61.26 P
ATOM 23 OP1 G A 58 44.428 56.861 74.975 1.00 59.57 O
ATOM 24 OP2 G A 58 46.618 55.577 75.416 1.00 62.68 O
ATOM 25 O5' G A 58 46.508 57.416 73.765 1.00 60.02 O
TER
ATOM 1 O3' C B 54 54.254 49.200 86.476 1.00 59.30 O
ATOM 2 P U B 55 55.402 49.565 85.423 1.00 64.81 P
ATOM 3 OP1 U B 55 55.494 48.472 84.421 1.00 66.15 O
ATOM 4 OP2 U B 55 56.590 49.935 86.214 1.00 64.98 O
ATOM 5 O5' U B 55 54.865 50.874 84.697 1.00 69.06 O
ATOM 6 C5' U B 55 54.734 52.107 85.401 1.00 75.76 C
ATOM 7 C4' U B 55 54.405 53.224 84.432 1.00 80.40 C
ATOM 8 O4' U B 55 55.588 53.603 83.672 1.00 83.15 O
ATOM 9 C3' U B 55 53.314 52.890 83.414 1.00 82.05 C
ATOM 10 O3' U B 55 52.514 54.028 83.174 1.00 83.58 O
ATOM 11 C2' U B 55 54.094 52.599 82.135 1.00 83.55 C
ATOM 12 O2' U B 55 53.370 52.955 80.973 1.00 82.65 O
ATOM 13 C1' U B 55 55.311 53.514 82.285 1.00 85.18 C
ATOM 14 N1 U B 55 56.507 53.002 81.595 1.00 86.98 N
ATOM 15 C2 U B 55 57.062 53.792 80.606 1.00 87.29 C
ATOM 16 O2 U B 55 56.601 54.871 80.285 1.00 86.76 O
ATOM 17 N3 U B 55 58.173 53.269 80.001 1.00 88.39 N
ATOM 18 C4 U B 55 58.775 52.059 80.272 1.00 89.96 C
ATOM 19 O4 U B 55 59.781 51.731 79.639 1.00 91.92 O
ATOM 20 C5 U B 55 58.143 51.293 81.303 1.00 89.20 C
ATOM 21 C6 U B 55 57.060 51.780 81.917 1.00 88.21 C
ATOM 22 P C B 56 51.303 54.378 84.163 1.00 83.86 P
ATOM 23 OP1 C B 56 51.610 53.823 85.508 1.00 84.09 O
ATOM 24 OP2 C B 56 50.046 53.988 83.476 1.00 83.16 O
ATOM 25 O5' C B 56 51.389 55.969 84.215 1.00 84.44 O
TER
Atoms:
C2: (51.913,57.286,76.409)
OP1: (46.001,57.011,81.165)
OP2: (47.964,55.355,81.059)
C4: (52.798,55.929,78.079)
O5': (47.989,57.461,79.738)
C3': (47.658,57.776,76.877)
C1': (49.889,58.613,76.800)
O4': (49.256,59.163,77.933)
C5': (47.345,58.626,79.242)
P: (47.458,56.745,81.051)
O2: (51.926,57.764,75.266)
C4': (47.835,58.924,77.857)
C2': (48.815,57.977,75.908)
O2': (48.488,58.851,74.852)
N1: (50.907,57.673,77.276)
N3: (52.853,56.406,76.834)
N4: (53.736,55.058,78.461)
C6: (50.860,57.183,78.548)
C5: (51.781,56.319,78.991)
O3': (46.379,57.902,76.243)
OP1: (46.001,57.011,81.165)
OP2: (47.964,55.355,81.059)
C4: (52.798,55.929,78.079)
O5': (47.989,57.461,79.738)
C3': (47.658,57.776,76.877)
C1': (49.889,58.613,76.800)
O4': (49.256,59.163,77.933)
C5': (47.345,58.626,79.242)
P: (47.458,56.745,81.051)
O2: (51.926,57.764,75.266)
C4': (47.835,58.924,77.857)
C2': (48.815,57.977,75.908)
O2': (48.488,58.851,74.852)
N1: (50.907,57.673,77.276)
N3: (52.853,56.406,76.834)
N4: (53.736,55.058,78.461)
C6: (50.860,57.183,78.548)
C5: (51.781,56.319,78.991)
O3': (46.379,57.902,76.243)
C4: (58.775,52.059,80.272)
N3: (58.173,53.269,80.001)
OP1: (55.494,48.472,84.421)
OP2: (56.590,49.935,86.214)
C2: (57.062,53.792,80.606)
C1': (55.311,53.514,82.285)
C3': (53.314,52.890,83.414)
O5': (54.865,50.874,84.697)
O4': (55.588,53.603,83.672)
C5': (54.734,52.107,85.401)
P: (55.402,49.565,85.423)
C4': (54.405,53.224,84.432)
C2': (54.094,52.599,82.135)
O2': (53.370,52.955,80.973)
N1: (56.507,53.002,81.595)
O4: (59.781,51.731,79.639)
O2: (56.601,54.871,80.285)
C6: (57.060,51.780,81.917)
C5: (58.143,51.293,81.303)
O3': (52.514,54.028,83.174)
N3: (58.173,53.269,80.001)
OP1: (55.494,48.472,84.421)
OP2: (56.590,49.935,86.214)
C2: (57.062,53.792,80.606)
C1': (55.311,53.514,82.285)
C3': (53.314,52.890,83.414)
O5': (54.865,50.874,84.697)
O4': (55.588,53.603,83.672)
C5': (54.734,52.107,85.401)
P: (55.402,49.565,85.423)
C4': (54.405,53.224,84.432)
C2': (54.094,52.599,82.135)
O2': (53.370,52.955,80.973)
N1: (56.507,53.002,81.595)
O4: (59.781,51.731,79.639)
O2: (56.601,54.871,80.285)
C6: (57.060,51.780,81.917)
C5: (58.143,51.293,81.303)
O3': (52.514,54.028,83.174)
Image (generated by PyMOL):