Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1Q81:A580:A553
Extra
PDB:
ATOM 1 O3' A A 579 -6.171 103.189 106.682 1.00 70.99 O
ATOM 2 P G A 580 -6.037 103.719 105.171 1.00 72.00 P
ATOM 3 OP1 G A 580 -5.531 105.121 105.263 1.00 71.17 O
ATOM 4 OP2 G A 580 -7.293 103.431 104.424 1.00 71.67 O
ATOM 5 O5' G A 580 -4.910 102.795 104.529 1.00 71.76 O
ATOM 6 C5' G A 580 -3.515 103.023 104.799 1.00 70.34 C
ATOM 7 C4' G A 580 -2.669 102.006 104.066 1.00 70.26 C
ATOM 8 O4' G A 580 -3.023 100.670 104.513 1.00 70.70 O
ATOM 9 C3' G A 580 -2.851 101.947 102.560 1.00 69.65 C
ATOM 10 O3' G A 580 -2.034 102.903 101.913 1.00 69.12 O
ATOM 11 C2' G A 580 -2.364 100.541 102.233 1.00 69.76 C
ATOM 12 O2' G A 580 -0.957 100.440 102.194 1.00 70.14 O
ATOM 13 C1' G A 580 -2.871 99.755 103.443 1.00 70.10 C
ATOM 14 N9 G A 580 -4.158 99.127 103.187 1.00 70.87 N
ATOM 15 C8 G A 580 -5.402 99.631 103.475 1.00 72.22 C
ATOM 16 N7 G A 580 -6.372 98.843 103.097 1.00 73.63 N
ATOM 17 C5 G A 580 -5.728 97.752 102.529 1.00 72.20 C
ATOM 18 C6 G A 580 -6.256 96.575 101.945 1.00 72.52 C
ATOM 19 O6 G A 580 -7.446 96.238 101.816 1.00 72.95 O
ATOM 20 N1 G A 580 -5.240 95.740 101.489 1.00 72.54 N
ATOM 21 C2 G A 580 -3.895 95.999 101.587 1.00 71.62 C
ATOM 22 N2 G A 580 -3.075 95.070 101.071 1.00 72.41 N
ATOM 23 N3 G A 580 -3.394 97.084 102.141 1.00 70.64 N
ATOM 24 C4 G A 580 -4.359 97.911 102.584 1.00 71.09 C
ATOM 25 P A A 581 -2.651 104.313 101.477 1.00 69.94 P
ATOM 26 OP1 A A 581 -2.495 105.234 102.640 1.00 68.58 O
ATOM 27 OP2 A A 581 -3.992 104.106 100.872 1.00 69.87 O
ATOM 28 O5' A A 581 -1.670 104.805 100.324 1.00 71.03 O
TER
ATOM 1 O3' G B 552 -5.701 94.363 97.063 1.00 64.05 O
ATOM 2 P A B 553 -5.192 93.446 98.284 1.00 62.93 P
ATOM 3 OP1 A B 553 -5.847 92.132 98.133 1.00 62.01 O
ATOM 4 OP2 A B 553 -5.299 94.174 99.565 1.00 62.01 O
ATOM 5 O5' A B 553 -3.646 93.225 97.966 1.00 63.50 O
ATOM 6 C5' A B 553 -3.235 92.438 96.823 1.00 63.46 C
ATOM 7 C4' A B 553 -1.730 92.473 96.673 1.00 62.13 C
ATOM 8 O4' A B 553 -1.301 93.783 96.217 1.00 61.78 O
ATOM 9 C3' A B 553 -0.938 92.245 97.949 1.00 61.31 C
ATOM 10 O3' A B 553 -0.805 90.863 98.225 1.00 59.82 O
ATOM 11 C2' A B 553 0.400 92.882 97.610 1.00 60.39 C
ATOM 12 O2' A B 553 1.167 92.040 96.771 1.00 60.10 O
ATOM 13 C1' A B 553 -0.047 94.100 96.797 1.00 59.71 C
ATOM 14 N9 A B 553 -0.191 95.355 97.537 1.00 56.77 N
ATOM 15 C8 A B 553 -1.354 95.940 97.961 1.00 56.08 C
ATOM 16 N7 A B 553 -1.181 97.098 98.551 1.00 56.97 N
ATOM 17 C5 A B 553 0.194 97.282 98.531 1.00 56.87 C
ATOM 18 C6 A B 553 1.026 98.330 99.001 1.00 56.74 C
ATOM 19 N6 A B 553 0.578 99.425 99.629 1.00 54.74 N
ATOM 20 N1 A B 553 2.353 98.203 98.804 1.00 56.82 N
ATOM 21 C2 A B 553 2.809 97.099 98.195 1.00 57.02 C
ATOM 22 N3 A B 553 2.137 96.053 97.721 1.00 56.37 N
ATOM 23 C4 A B 553 0.818 96.208 97.918 1.00 56.49 C
ATOM 24 P A B 554 -0.930 90.333 99.734 1.00 60.63 P
ATOM 25 OP1 A B 554 -1.122 88.857 99.601 1.00 58.59 O
ATOM 26 OP2 A B 554 -1.923 91.155 100.485 1.00 59.42 O
ATOM 27 O5' A B 554 0.493 90.622 100.388 1.00 59.17 O
TER
ATOM 2 P G A 580 -6.037 103.719 105.171 1.00 72.00 P
ATOM 3 OP1 G A 580 -5.531 105.121 105.263 1.00 71.17 O
ATOM 4 OP2 G A 580 -7.293 103.431 104.424 1.00 71.67 O
ATOM 5 O5' G A 580 -4.910 102.795 104.529 1.00 71.76 O
ATOM 6 C5' G A 580 -3.515 103.023 104.799 1.00 70.34 C
ATOM 7 C4' G A 580 -2.669 102.006 104.066 1.00 70.26 C
ATOM 8 O4' G A 580 -3.023 100.670 104.513 1.00 70.70 O
ATOM 9 C3' G A 580 -2.851 101.947 102.560 1.00 69.65 C
ATOM 10 O3' G A 580 -2.034 102.903 101.913 1.00 69.12 O
ATOM 11 C2' G A 580 -2.364 100.541 102.233 1.00 69.76 C
ATOM 12 O2' G A 580 -0.957 100.440 102.194 1.00 70.14 O
ATOM 13 C1' G A 580 -2.871 99.755 103.443 1.00 70.10 C
ATOM 14 N9 G A 580 -4.158 99.127 103.187 1.00 70.87 N
ATOM 15 C8 G A 580 -5.402 99.631 103.475 1.00 72.22 C
ATOM 16 N7 G A 580 -6.372 98.843 103.097 1.00 73.63 N
ATOM 17 C5 G A 580 -5.728 97.752 102.529 1.00 72.20 C
ATOM 18 C6 G A 580 -6.256 96.575 101.945 1.00 72.52 C
ATOM 19 O6 G A 580 -7.446 96.238 101.816 1.00 72.95 O
ATOM 20 N1 G A 580 -5.240 95.740 101.489 1.00 72.54 N
ATOM 21 C2 G A 580 -3.895 95.999 101.587 1.00 71.62 C
ATOM 22 N2 G A 580 -3.075 95.070 101.071 1.00 72.41 N
ATOM 23 N3 G A 580 -3.394 97.084 102.141 1.00 70.64 N
ATOM 24 C4 G A 580 -4.359 97.911 102.584 1.00 71.09 C
ATOM 25 P A A 581 -2.651 104.313 101.477 1.00 69.94 P
ATOM 26 OP1 A A 581 -2.495 105.234 102.640 1.00 68.58 O
ATOM 27 OP2 A A 581 -3.992 104.106 100.872 1.00 69.87 O
ATOM 28 O5' A A 581 -1.670 104.805 100.324 1.00 71.03 O
TER
ATOM 1 O3' G B 552 -5.701 94.363 97.063 1.00 64.05 O
ATOM 2 P A B 553 -5.192 93.446 98.284 1.00 62.93 P
ATOM 3 OP1 A B 553 -5.847 92.132 98.133 1.00 62.01 O
ATOM 4 OP2 A B 553 -5.299 94.174 99.565 1.00 62.01 O
ATOM 5 O5' A B 553 -3.646 93.225 97.966 1.00 63.50 O
ATOM 6 C5' A B 553 -3.235 92.438 96.823 1.00 63.46 C
ATOM 7 C4' A B 553 -1.730 92.473 96.673 1.00 62.13 C
ATOM 8 O4' A B 553 -1.301 93.783 96.217 1.00 61.78 O
ATOM 9 C3' A B 553 -0.938 92.245 97.949 1.00 61.31 C
ATOM 10 O3' A B 553 -0.805 90.863 98.225 1.00 59.82 O
ATOM 11 C2' A B 553 0.400 92.882 97.610 1.00 60.39 C
ATOM 12 O2' A B 553 1.167 92.040 96.771 1.00 60.10 O
ATOM 13 C1' A B 553 -0.047 94.100 96.797 1.00 59.71 C
ATOM 14 N9 A B 553 -0.191 95.355 97.537 1.00 56.77 N
ATOM 15 C8 A B 553 -1.354 95.940 97.961 1.00 56.08 C
ATOM 16 N7 A B 553 -1.181 97.098 98.551 1.00 56.97 N
ATOM 17 C5 A B 553 0.194 97.282 98.531 1.00 56.87 C
ATOM 18 C6 A B 553 1.026 98.330 99.001 1.00 56.74 C
ATOM 19 N6 A B 553 0.578 99.425 99.629 1.00 54.74 N
ATOM 20 N1 A B 553 2.353 98.203 98.804 1.00 56.82 N
ATOM 21 C2 A B 553 2.809 97.099 98.195 1.00 57.02 C
ATOM 22 N3 A B 553 2.137 96.053 97.721 1.00 56.37 N
ATOM 23 C4 A B 553 0.818 96.208 97.918 1.00 56.49 C
ATOM 24 P A B 554 -0.930 90.333 99.734 1.00 60.63 P
ATOM 25 OP1 A B 554 -1.122 88.857 99.601 1.00 58.59 O
ATOM 26 OP2 A B 554 -1.923 91.155 100.485 1.00 59.42 O
ATOM 27 O5' A B 554 0.493 90.622 100.388 1.00 59.17 O
TER
Atoms:
OP1: (-5.531,105.121,105.263)
OP2: (-7.293,103.431,104.424)
C3': (-2.851,101.947,102.560)
C1': (-2.871,99.755,103.443)
C5': (-3.515,103.023,104.799)
O6: (-7.446,96.238,101.816)
O4': (-3.023,100.670,104.513)
C8: (-5.402,99.631,103.475)
C2: (-3.895,95.999,101.587)
C6: (-6.256,96.575,101.945)
C5: (-5.728,97.752,102.529)
C4: (-4.359,97.911,102.584)
P: (-6.037,103.719,105.171)
C4': (-2.669,102.006,104.066)
C2': (-2.364,100.541,102.233)
O2': (-0.957,100.440,102.194)
N1: (-5.240,95.740,101.489)
N2: (-3.075,95.070,101.071)
N3: (-3.394,97.084,102.141)
N7: (-6.372,98.843,103.097)
N9: (-4.158,99.127,103.187)
O5': (-4.910,102.795,104.529)
O3': (-2.034,102.903,101.913)
OP2: (-7.293,103.431,104.424)
C3': (-2.851,101.947,102.560)
C1': (-2.871,99.755,103.443)
C5': (-3.515,103.023,104.799)
O6: (-7.446,96.238,101.816)
O4': (-3.023,100.670,104.513)
C8: (-5.402,99.631,103.475)
C2: (-3.895,95.999,101.587)
C6: (-6.256,96.575,101.945)
C5: (-5.728,97.752,102.529)
C4: (-4.359,97.911,102.584)
P: (-6.037,103.719,105.171)
C4': (-2.669,102.006,104.066)
C2': (-2.364,100.541,102.233)
O2': (-0.957,100.440,102.194)
N1: (-5.240,95.740,101.489)
N2: (-3.075,95.070,101.071)
N3: (-3.394,97.084,102.141)
N7: (-6.372,98.843,103.097)
N9: (-4.158,99.127,103.187)
O5': (-4.910,102.795,104.529)
O3': (-2.034,102.903,101.913)
OP1: (-5.847,92.132,98.133)
OP2: (-5.299,94.174,99.565)
C3': (-0.938,92.245,97.949)
C1': (-0.047,94.100,96.797)
C5': (-3.235,92.438,96.823)
O4': (-1.301,93.783,96.217)
C8: (-1.354,95.940,97.961)
O2': (1.167,92.040,96.771)
C6: (1.026,98.330,99.001)
C5: (0.194,97.282,98.531)
C4: (0.818,96.208,97.918)
P: (-5.192,93.446,98.284)
C4': (-1.730,92.473,96.673)
C2': (0.400,92.882,97.610)
C2: (2.809,97.099,98.195)
N1: (2.353,98.203,98.804)
N3: (2.137,96.053,97.721)
N6: (0.578,99.425,99.629)
N7: (-1.181,97.098,98.551)
N9: (-0.191,95.355,97.537)
O5': (-3.646,93.225,97.966)
O3': (-0.805,90.863,98.225)
OP2: (-5.299,94.174,99.565)
C3': (-0.938,92.245,97.949)
C1': (-0.047,94.100,96.797)
C5': (-3.235,92.438,96.823)
O4': (-1.301,93.783,96.217)
C8: (-1.354,95.940,97.961)
O2': (1.167,92.040,96.771)
C6: (1.026,98.330,99.001)
C5: (0.194,97.282,98.531)
C4: (0.818,96.208,97.918)
P: (-5.192,93.446,98.284)
C4': (-1.730,92.473,96.673)
C2': (0.400,92.882,97.610)
C2: (2.809,97.099,98.195)
N1: (2.353,98.203,98.804)
N3: (2.137,96.053,97.721)
N6: (0.578,99.425,99.629)
N7: (-1.181,97.098,98.551)
N9: (-0.191,95.355,97.537)
O5': (-3.646,93.225,97.966)
O3': (-0.805,90.863,98.225)
Image (generated by PyMOL):