Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0630:01316
Extra
PDB:
ATOM 1 O3' G A 629 40.081 125.451 64.373 1.00 29.24 O
ATOM 2 P G A 630 39.815 123.872 64.433 1.00 32.74 P
ATOM 3 OP1 G A 630 40.181 123.299 63.118 1.00 33.18 O
ATOM 4 OP2 G A 630 38.456 123.652 64.973 1.00 33.73 O
ATOM 5 O5' G A 630 40.872 123.323 65.489 1.00 33.53 O
ATOM 6 C5' G A 630 42.261 123.218 65.137 1.00 33.85 C
ATOM 7 C4' G A 630 43.071 122.786 66.327 1.00 34.00 C
ATOM 8 O4' G A 630 42.869 123.720 67.420 1.00 35.12 O
ATOM 9 C3' G A 630 42.662 121.458 66.920 1.00 33.22 C
ATOM 10 O3' G A 630 43.221 120.392 66.174 1.00 33.22 O
ATOM 11 C2' G A 630 43.223 121.567 68.328 1.00 32.77 C
ATOM 12 O2' G A 630 44.625 121.419 68.357 1.00 30.05 O
ATOM 13 C1' G A 630 42.889 123.022 68.655 1.00 33.04 C
ATOM 14 N9 G A 630 41.575 123.160 69.270 1.00 31.79 N
ATOM 15 C8 G A 630 40.402 123.468 68.632 1.00 31.87 C
ATOM 16 N7 G A 630 39.377 123.498 69.434 1.00 32.86 N
ATOM 17 C5 G A 630 39.906 123.197 70.680 1.00 32.36 C
ATOM 18 C6 G A 630 39.270 123.072 71.935 1.00 33.92 C
ATOM 19 O6 G A 630 38.079 123.208 72.203 1.00 37.46 O
ATOM 20 N1 G A 630 40.172 122.748 72.940 1.00 33.55 N
ATOM 21 C2 G A 630 41.514 122.560 72.762 1.00 32.76 C
ATOM 22 N2 G A 630 42.209 122.239 73.865 1.00 31.29 N
ATOM 23 N3 G A 630 42.125 122.674 71.590 1.00 32.15 N
ATOM 24 C4 G A 630 41.262 122.992 70.599 1.00 31.57 C
ATOM 25 P A A 631 42.275 119.513 65.225 1.00 31.43 P
ATOM 26 OP1 A A 631 42.598 119.868 63.823 1.00 32.65 O
ATOM 27 OP2 A A 631 40.884 119.655 65.713 1.00 30.72 O
ATOM 28 O5' A A 631 42.764 118.028 65.484 1.00 27.24 O
TER
ATOM 1 O3' A B1315 38.335 122.731 77.714 1.00 35.75 O
ATOM 2 P A B1316 39.271 122.803 76.422 1.00 38.01 P
ATOM 3 OP1 A B1316 39.113 124.145 75.816 1.00 36.19 O
ATOM 4 OP2 A B1316 39.035 121.592 75.610 1.00 39.79 O
ATOM 5 O5' A B1316 40.730 122.682 77.037 1.00 39.13 O
ATOM 6 C5' A B1316 41.119 123.526 78.128 1.00 40.18 C
ATOM 7 C4' A B1316 41.803 122.722 79.215 1.00 39.44 C
ATOM 8 O4' A B1316 40.879 121.730 79.734 1.00 38.36 O
ATOM 9 C3' A B1316 43.076 121.953 78.852 1.00 37.07 C
ATOM 10 O3' A B1316 43.988 122.111 79.931 1.00 35.00 O
ATOM 11 C2' A B1316 42.600 120.501 78.840 1.00 36.87 C
ATOM 12 O2' A B1316 43.635 119.601 79.170 1.00 39.16 O
ATOM 13 C1' A B1316 41.581 120.538 79.969 1.00 36.94 C
ATOM 14 N9 A B1316 40.607 119.455 80.067 1.00 36.41 N
ATOM 15 C8 A B1316 40.342 118.409 79.222 1.00 36.50 C
ATOM 16 N7 A B1316 39.347 117.653 79.617 1.00 37.16 N
ATOM 17 C5 A B1316 38.938 118.237 80.808 1.00 38.32 C
ATOM 18 C6 A B1316 37.907 117.925 81.723 1.00 39.93 C
ATOM 19 N6 A B1316 37.054 116.908 81.573 1.00 40.14 N
ATOM 20 N1 A B1316 37.779 118.713 82.813 1.00 41.00 N
ATOM 21 C2 A B1316 38.626 119.738 82.967 1.00 39.65 C
ATOM 22 N3 A B1316 39.620 120.132 82.181 1.00 38.21 N
ATOM 23 C4 A B1316 39.720 119.333 81.105 1.00 37.34 C
ATOM 24 P A B1317 45.046 123.321 79.917 1.00 35.05 P
ATOM 25 OP1 A B1317 45.363 123.578 81.328 1.00 35.26 O
ATOM 26 OP2 A B1317 44.548 124.427 79.082 1.00 36.17 O
ATOM 27 O5' A B1317 46.326 122.683 79.234 1.00 31.63 O
TER
ATOM 2 P G A 630 39.815 123.872 64.433 1.00 32.74 P
ATOM 3 OP1 G A 630 40.181 123.299 63.118 1.00 33.18 O
ATOM 4 OP2 G A 630 38.456 123.652 64.973 1.00 33.73 O
ATOM 5 O5' G A 630 40.872 123.323 65.489 1.00 33.53 O
ATOM 6 C5' G A 630 42.261 123.218 65.137 1.00 33.85 C
ATOM 7 C4' G A 630 43.071 122.786 66.327 1.00 34.00 C
ATOM 8 O4' G A 630 42.869 123.720 67.420 1.00 35.12 O
ATOM 9 C3' G A 630 42.662 121.458 66.920 1.00 33.22 C
ATOM 10 O3' G A 630 43.221 120.392 66.174 1.00 33.22 O
ATOM 11 C2' G A 630 43.223 121.567 68.328 1.00 32.77 C
ATOM 12 O2' G A 630 44.625 121.419 68.357 1.00 30.05 O
ATOM 13 C1' G A 630 42.889 123.022 68.655 1.00 33.04 C
ATOM 14 N9 G A 630 41.575 123.160 69.270 1.00 31.79 N
ATOM 15 C8 G A 630 40.402 123.468 68.632 1.00 31.87 C
ATOM 16 N7 G A 630 39.377 123.498 69.434 1.00 32.86 N
ATOM 17 C5 G A 630 39.906 123.197 70.680 1.00 32.36 C
ATOM 18 C6 G A 630 39.270 123.072 71.935 1.00 33.92 C
ATOM 19 O6 G A 630 38.079 123.208 72.203 1.00 37.46 O
ATOM 20 N1 G A 630 40.172 122.748 72.940 1.00 33.55 N
ATOM 21 C2 G A 630 41.514 122.560 72.762 1.00 32.76 C
ATOM 22 N2 G A 630 42.209 122.239 73.865 1.00 31.29 N
ATOM 23 N3 G A 630 42.125 122.674 71.590 1.00 32.15 N
ATOM 24 C4 G A 630 41.262 122.992 70.599 1.00 31.57 C
ATOM 25 P A A 631 42.275 119.513 65.225 1.00 31.43 P
ATOM 26 OP1 A A 631 42.598 119.868 63.823 1.00 32.65 O
ATOM 27 OP2 A A 631 40.884 119.655 65.713 1.00 30.72 O
ATOM 28 O5' A A 631 42.764 118.028 65.484 1.00 27.24 O
TER
ATOM 1 O3' A B1315 38.335 122.731 77.714 1.00 35.75 O
ATOM 2 P A B1316 39.271 122.803 76.422 1.00 38.01 P
ATOM 3 OP1 A B1316 39.113 124.145 75.816 1.00 36.19 O
ATOM 4 OP2 A B1316 39.035 121.592 75.610 1.00 39.79 O
ATOM 5 O5' A B1316 40.730 122.682 77.037 1.00 39.13 O
ATOM 6 C5' A B1316 41.119 123.526 78.128 1.00 40.18 C
ATOM 7 C4' A B1316 41.803 122.722 79.215 1.00 39.44 C
ATOM 8 O4' A B1316 40.879 121.730 79.734 1.00 38.36 O
ATOM 9 C3' A B1316 43.076 121.953 78.852 1.00 37.07 C
ATOM 10 O3' A B1316 43.988 122.111 79.931 1.00 35.00 O
ATOM 11 C2' A B1316 42.600 120.501 78.840 1.00 36.87 C
ATOM 12 O2' A B1316 43.635 119.601 79.170 1.00 39.16 O
ATOM 13 C1' A B1316 41.581 120.538 79.969 1.00 36.94 C
ATOM 14 N9 A B1316 40.607 119.455 80.067 1.00 36.41 N
ATOM 15 C8 A B1316 40.342 118.409 79.222 1.00 36.50 C
ATOM 16 N7 A B1316 39.347 117.653 79.617 1.00 37.16 N
ATOM 17 C5 A B1316 38.938 118.237 80.808 1.00 38.32 C
ATOM 18 C6 A B1316 37.907 117.925 81.723 1.00 39.93 C
ATOM 19 N6 A B1316 37.054 116.908 81.573 1.00 40.14 N
ATOM 20 N1 A B1316 37.779 118.713 82.813 1.00 41.00 N
ATOM 21 C2 A B1316 38.626 119.738 82.967 1.00 39.65 C
ATOM 22 N3 A B1316 39.620 120.132 82.181 1.00 38.21 N
ATOM 23 C4 A B1316 39.720 119.333 81.105 1.00 37.34 C
ATOM 24 P A B1317 45.046 123.321 79.917 1.00 35.05 P
ATOM 25 OP1 A B1317 45.363 123.578 81.328 1.00 35.26 O
ATOM 26 OP2 A B1317 44.548 124.427 79.082 1.00 36.17 O
ATOM 27 O5' A B1317 46.326 122.683 79.234 1.00 31.63 O
TER
Atoms:
OP1: (40.181,123.299,63.118)
OP2: (38.456,123.652,64.973)
C3': (42.662,121.458,66.920)
C1': (42.889,123.022,68.655)
C5': (42.261,123.218,65.137)
O6: (38.079,123.208,72.203)
O4': (42.869,123.720,67.420)
C8: (40.402,123.468,68.632)
C2: (41.514,122.560,72.762)
C6: (39.270,123.072,71.935)
C5: (39.906,123.197,70.680)
C4: (41.262,122.992,70.599)
P: (39.815,123.872,64.433)
C4': (43.071,122.786,66.327)
C2': (43.223,121.567,68.328)
O2': (44.625,121.419,68.357)
N1: (40.172,122.748,72.940)
N2: (42.209,122.239,73.865)
N3: (42.125,122.674,71.590)
N7: (39.377,123.498,69.434)
N9: (41.575,123.160,69.270)
O5': (40.872,123.323,65.489)
O3': (43.221,120.392,66.174)
OP2: (38.456,123.652,64.973)
C3': (42.662,121.458,66.920)
C1': (42.889,123.022,68.655)
C5': (42.261,123.218,65.137)
O6: (38.079,123.208,72.203)
O4': (42.869,123.720,67.420)
C8: (40.402,123.468,68.632)
C2: (41.514,122.560,72.762)
C6: (39.270,123.072,71.935)
C5: (39.906,123.197,70.680)
C4: (41.262,122.992,70.599)
P: (39.815,123.872,64.433)
C4': (43.071,122.786,66.327)
C2': (43.223,121.567,68.328)
O2': (44.625,121.419,68.357)
N1: (40.172,122.748,72.940)
N2: (42.209,122.239,73.865)
N3: (42.125,122.674,71.590)
N7: (39.377,123.498,69.434)
N9: (41.575,123.160,69.270)
O5': (40.872,123.323,65.489)
O3': (43.221,120.392,66.174)
OP1: (39.113,124.145,75.816)
OP2: (39.035,121.592,75.610)
C3': (43.076,121.953,78.852)
C1': (41.581,120.538,79.969)
C5': (41.119,123.526,78.128)
O4': (40.879,121.730,79.734)
C8: (40.342,118.409,79.222)
O2': (43.635,119.601,79.170)
C6: (37.907,117.925,81.723)
C5: (38.938,118.237,80.808)
C4: (39.720,119.333,81.105)
P: (39.271,122.803,76.422)
C4': (41.803,122.722,79.215)
C2': (42.600,120.501,78.840)
C2: (38.626,119.738,82.967)
N1: (37.779,118.713,82.813)
N3: (39.620,120.132,82.181)
N6: (37.054,116.908,81.573)
N7: (39.347,117.653,79.617)
N9: (40.607,119.455,80.067)
O5': (40.730,122.682,77.037)
O3': (43.988,122.111,79.931)
OP2: (39.035,121.592,75.610)
C3': (43.076,121.953,78.852)
C1': (41.581,120.538,79.969)
C5': (41.119,123.526,78.128)
O4': (40.879,121.730,79.734)
C8: (40.342,118.409,79.222)
O2': (43.635,119.601,79.170)
C6: (37.907,117.925,81.723)
C5: (38.938,118.237,80.808)
C4: (39.720,119.333,81.105)
P: (39.271,122.803,76.422)
C4': (41.803,122.722,79.215)
C2': (42.600,120.501,78.840)
C2: (38.626,119.738,82.967)
N1: (37.779,118.713,82.813)
N3: (39.620,120.132,82.181)
N6: (37.054,116.908,81.573)
N7: (39.347,117.653,79.617)
N9: (40.607,119.455,80.067)
O5': (40.730,122.682,77.037)
O3': (43.988,122.111,79.931)
Image (generated by PyMOL):