ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHC:A559:A737

Extra

PDB:
ATOM 1 O3' U A 558 46.246 31.307 8.886 1.00 75.66 O
ATOM 2 P G A 559 45.873 32.419 9.986 1.00 78.73 P
ATOM 3 OP1 G A 559 44.796 33.246 9.412 1.00 95.32 O
ATOM 4 OP2 G A 559 47.143 33.087 10.392 1.00 80.77 O
ATOM 5 O5' G A 559 45.298 31.540 11.194 1.00 76.52 O
ATOM 6 C5' G A 559 44.291 30.561 10.974 1.00 66.99 C
ATOM 7 C4' G A 559 44.544 29.295 11.769 1.00 71.86 C
ATOM 8 O4' G A 559 45.868 28.777 11.473 1.00 67.71 O
ATOM 9 C3' G A 559 44.504 29.429 13.291 1.00 72.06 C
ATOM 10 O3' G A 559 43.175 29.347 13.808 1.00 65.30 O
ATOM 11 C2' G A 559 45.425 28.302 13.769 1.00 71.85 C
ATOM 12 O2' G A 559 44.723 27.073 13.856 1.00 70.98 O
ATOM 13 C1' G A 559 46.439 28.199 12.627 1.00 70.22 C
ATOM 14 N9 G A 559 47.696 28.906 12.932 1.00 80.69 N
ATOM 15 C8 G A 559 48.083 30.131 12.449 1.00 87.23 C
ATOM 16 N7 G A 559 49.255 30.522 12.873 1.00 87.67 N
ATOM 17 C5 G A 559 49.672 29.481 13.685 1.00 82.33 C
ATOM 18 C6 G A 559 50.866 29.350 14.421 1.00 80.97 C
ATOM 19 O6 G A 559 51.805 30.157 14.485 1.00 78.38 O
ATOM 20 N1 G A 559 50.886 28.143 15.110 1.00 81.47 N
ATOM 21 C2 G A 559 49.892 27.204 15.091 1.00 77.59 C
ATOM 22 N2 G A 559 50.092 26.104 15.818 1.00 76.35 N
ATOM 23 N3 G A 559 48.774 27.320 14.410 1.00 83.15 N
ATOM 24 C4 G A 559 48.729 28.477 13.731 1.00 81.27 C
ATOM 25 P U A 560 42.886 29.362 15.399 1.00 79.52 P
ATOM 26 OP1 U A 560 41.432 29.555 15.567 1.00 83.66 O
ATOM 27 OP2 U A 560 43.812 30.352 16.021 1.00 73.52 O
ATOM 28 O5' U A 560 43.280 27.889 15.852 1.00 73.71 O
TER

ATOM 1 O3' G B 736 54.072 29.272 18.402 1.00 77.66 O
ATOM 2 P A B 737 53.944 27.824 17.739 1.00 78.07 P
ATOM 3 OP1 A B 737 55.168 27.609 16.937 1.00 77.17 O
ATOM 4 OP2 A B 737 52.631 27.761 17.062 1.00 79.06 O
ATOM 5 O5' A B 737 53.942 26.867 19.015 1.00 79.97 O
ATOM 6 C5' A B 737 54.941 26.995 20.017 1.00 71.55 C
ATOM 7 C4' A B 737 54.792 25.960 21.109 1.00 74.06 C
ATOM 8 O4' A B 737 53.578 26.190 21.874 1.00 77.40 O
ATOM 9 C3' A B 737 54.648 24.516 20.672 1.00 73.00 C
ATOM 10 O3' A B 737 55.853 23.946 20.220 1.00 72.93 O
ATOM 11 C2' A B 737 54.090 23.865 21.930 1.00 75.88 C
ATOM 12 O2' A B 737 55.109 23.676 22.901 1.00 72.42 O
ATOM 13 C1' A B 737 53.142 24.961 22.431 1.00 75.07 C
ATOM 14 N9 A B 737 51.755 24.700 22.012 1.00 74.80 N
ATOM 15 C8 A B 737 51.049 25.120 20.915 1.00 77.43 C
ATOM 16 N7 A B 737 49.830 24.642 20.858 1.00 69.62 N
ATOM 17 C5 A B 737 49.750 23.843 21.983 1.00 71.12 C
ATOM 18 C6 A B 737 48.721 23.048 22.511 1.00 78.94 C
ATOM 19 N6 A B 737 47.522 22.927 21.941 1.00 81.62 N
ATOM 20 N1 A B 737 48.955 22.373 23.661 1.00 77.13 N
ATOM 21 C2 A B 737 50.161 22.503 24.229 1.00 78.02 C
ATOM 22 N3 A B 737 51.208 23.218 23.826 1.00 75.57 N
ATOM 23 C4 A B 737 50.925 23.867 22.691 1.00 72.19 C
ATOM 24 P G B 738 55.964 23.424 18.715 1.00106.78 P
ATOM 25 OP1 G B 738 57.235 22.670 18.612 1.00112.91 O
ATOM 26 OP2 G B 738 55.754 24.587 17.830 1.00107.14 O
ATOM 27 O5' G B 738 54.730 22.435 18.602 1.00 83.02 O
TER

Atoms:
OP1: (44.796,33.246,9.412)
OP2: (47.143,33.087,10.392)
C3': (44.504,29.429,13.291)
C1': (46.439,28.199,12.627)
C5': (44.291,30.561,10.974)
O6: (51.805,30.157,14.485)
O4': (45.868,28.777,11.473)
C8: (48.083,30.131,12.449)
C2: (49.892,27.204,15.091)
C6: (50.866,29.350,14.421)
C5: (49.672,29.481,13.685)
C4: (48.729,28.477,13.731)
P: (45.873,32.419,9.986)
C4': (44.544,29.295,11.769)
C2': (45.425,28.302,13.769)
O2': (44.723,27.073,13.856)
N1: (50.886,28.143,15.110)
N2: (50.092,26.104,15.818)
N3: (48.774,27.320,14.410)
N7: (49.255,30.522,12.873)
N9: (47.696,28.906,12.932)
O5': (45.298,31.540,11.194)
O3': (43.175,29.347,13.808)
OP1: (55.168,27.609,16.937)
OP2: (52.631,27.761,17.062)
C3': (54.648,24.516,20.672)
C1': (53.142,24.961,22.431)
C5': (54.941,26.995,20.017)
O4': (53.578,26.190,21.874)
C8: (51.049,25.120,20.915)
O2': (55.109,23.676,22.901)
C6: (48.721,23.048,22.511)
C5: (49.750,23.843,21.983)
C4: (50.925,23.867,22.691)
P: (53.944,27.824,17.739)
C4': (54.792,25.960,21.109)
C2': (54.090,23.865,21.930)
C2: (50.161,22.503,24.229)
N1: (48.955,22.373,23.661)
N3: (51.208,23.218,23.826)
N6: (47.522,22.927,21.941)
N7: (49.830,24.642,20.858)
N9: (51.755,24.700,22.012)
O5': (53.942,26.867,19.015)
O3': (55.853,23.946,20.220)
Image (generated by PyMOL):
PyMOL image
show in jmol