Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CCJ:0580:0553
Extra
PDB:
ATOM 1 O3' A A 579 -6.535 103.219 106.153 1.00 74.73 O
ATOM 2 P G A 580 -6.421 103.684 104.624 1.00 74.99 P
ATOM 3 OP1 G A 580 -6.065 105.120 104.680 1.00 75.77 O
ATOM 4 OP2 G A 580 -7.626 103.249 103.868 1.00 73.77 O
ATOM 5 O5' G A 580 -5.192 102.846 104.053 1.00 74.92 O
ATOM 6 C5' G A 580 -3.835 103.169 104.408 1.00 74.05 C
ATOM 7 C4' G A 580 -2.893 102.172 103.785 1.00 73.76 C
ATOM 8 O4' G A 580 -3.237 100.851 104.270 1.00 74.36 O
ATOM 9 C3' G A 580 -2.990 102.038 102.274 1.00 73.44 C
ATOM 10 O3' G A 580 -2.196 103.002 101.614 1.00 71.71 O
ATOM 11 C2' G A 580 -2.449 100.639 102.032 1.00 74.34 C
ATOM 12 O2' G A 580 -1.038 100.578 102.038 1.00 75.83 O
ATOM 13 C1' G A 580 -2.996 99.895 103.250 1.00 74.75 C
ATOM 14 N9 G A 580 -4.243 99.203 102.950 1.00 73.74 N
ATOM 15 C8 G A 580 -5.523 99.640 103.186 1.00 73.27 C
ATOM 16 N7 G A 580 -6.429 98.794 102.785 1.00 73.67 N
ATOM 17 C5 G A 580 -5.701 97.735 102.262 1.00 73.12 C
ATOM 18 C6 G A 580 -6.135 96.520 101.685 1.00 73.67 C
ATOM 19 O6 G A 580 -7.293 96.106 101.530 1.00 74.39 O
ATOM 20 N1 G A 580 -5.061 95.743 101.271 1.00 73.17 N
ATOM 21 C2 G A 580 -3.741 96.083 101.404 1.00 71.94 C
ATOM 22 N2 G A 580 -2.857 95.201 100.928 1.00 72.46 N
ATOM 23 N3 G A 580 -3.324 97.202 101.956 1.00 71.30 N
ATOM 24 C4 G A 580 -4.351 97.976 102.357 1.00 72.54 C
ATOM 25 P A A 581 -2.895 104.275 100.951 1.00 73.30 P
ATOM 26 OP1 A A 581 -2.937 105.338 101.991 1.00 71.88 O
ATOM 27 OP2 A A 581 -4.153 103.824 100.314 1.00 73.13 O
ATOM 28 O5' A A 581 -1.883 104.716 99.803 1.00 71.73 O
TER
ATOM 1 O3' G B 552 -5.941 94.152 96.850 1.00 75.35 O
ATOM 2 P A B 553 -5.241 93.367 98.056 1.00 75.23 P
ATOM 3 OP1 A B 553 -5.686 91.957 97.982 1.00 75.24 O
ATOM 4 OP2 A B 553 -5.440 94.132 99.299 1.00 76.31 O
ATOM 5 O5' A B 553 -3.694 93.408 97.694 1.00 75.02 O
ATOM 6 C5' A B 553 -3.175 92.569 96.648 1.00 74.27 C
ATOM 7 C4' A B 553 -1.677 92.725 96.530 1.00 71.97 C
ATOM 8 O4' A B 553 -1.349 94.059 96.068 1.00 70.51 O
ATOM 9 C3' A B 553 -0.874 92.576 97.809 1.00 70.86 C
ATOM 10 O3' A B 553 -0.686 91.198 98.140 1.00 70.82 O
ATOM 11 C2' A B 553 0.426 93.266 97.419 1.00 69.88 C
ATOM 12 O2' A B 553 1.188 92.471 96.540 1.00 70.79 O
ATOM 13 C1' A B 553 -0.095 94.441 96.595 1.00 68.93 C
ATOM 14 N9 A B 553 -0.267 95.681 97.345 1.00 67.60 N
ATOM 15 C8 A B 553 -1.435 96.254 97.779 1.00 67.41 C
ATOM 16 N7 A B 553 -1.266 97.412 98.371 1.00 66.81 N
ATOM 17 C5 A B 553 0.108 97.608 98.334 1.00 66.22 C
ATOM 18 C6 A B 553 0.928 98.657 98.781 1.00 65.26 C
ATOM 19 N6 A B 553 0.469 99.767 99.348 1.00 65.43 N
ATOM 20 N1 A B 553 2.257 98.529 98.611 1.00 64.77 N
ATOM 21 C2 A B 553 2.721 97.430 98.013 1.00 65.30 C
ATOM 22 N3 A B 553 2.053 96.387 97.533 1.00 66.30 N
ATOM 23 C4 A B 553 0.735 96.539 97.727 1.00 66.59 C
ATOM 24 P A B 554 -0.855 90.702 99.667 1.00 71.45 P
ATOM 25 OP1 A B 554 -1.134 89.237 99.601 1.00 70.60 O
ATOM 26 OP2 A B 554 -1.803 91.603 100.384 1.00 69.47 O
ATOM 27 O5' A B 554 0.587 90.923 100.306 1.00 67.98 O
TER
ATOM 2 P G A 580 -6.421 103.684 104.624 1.00 74.99 P
ATOM 3 OP1 G A 580 -6.065 105.120 104.680 1.00 75.77 O
ATOM 4 OP2 G A 580 -7.626 103.249 103.868 1.00 73.77 O
ATOM 5 O5' G A 580 -5.192 102.846 104.053 1.00 74.92 O
ATOM 6 C5' G A 580 -3.835 103.169 104.408 1.00 74.05 C
ATOM 7 C4' G A 580 -2.893 102.172 103.785 1.00 73.76 C
ATOM 8 O4' G A 580 -3.237 100.851 104.270 1.00 74.36 O
ATOM 9 C3' G A 580 -2.990 102.038 102.274 1.00 73.44 C
ATOM 10 O3' G A 580 -2.196 103.002 101.614 1.00 71.71 O
ATOM 11 C2' G A 580 -2.449 100.639 102.032 1.00 74.34 C
ATOM 12 O2' G A 580 -1.038 100.578 102.038 1.00 75.83 O
ATOM 13 C1' G A 580 -2.996 99.895 103.250 1.00 74.75 C
ATOM 14 N9 G A 580 -4.243 99.203 102.950 1.00 73.74 N
ATOM 15 C8 G A 580 -5.523 99.640 103.186 1.00 73.27 C
ATOM 16 N7 G A 580 -6.429 98.794 102.785 1.00 73.67 N
ATOM 17 C5 G A 580 -5.701 97.735 102.262 1.00 73.12 C
ATOM 18 C6 G A 580 -6.135 96.520 101.685 1.00 73.67 C
ATOM 19 O6 G A 580 -7.293 96.106 101.530 1.00 74.39 O
ATOM 20 N1 G A 580 -5.061 95.743 101.271 1.00 73.17 N
ATOM 21 C2 G A 580 -3.741 96.083 101.404 1.00 71.94 C
ATOM 22 N2 G A 580 -2.857 95.201 100.928 1.00 72.46 N
ATOM 23 N3 G A 580 -3.324 97.202 101.956 1.00 71.30 N
ATOM 24 C4 G A 580 -4.351 97.976 102.357 1.00 72.54 C
ATOM 25 P A A 581 -2.895 104.275 100.951 1.00 73.30 P
ATOM 26 OP1 A A 581 -2.937 105.338 101.991 1.00 71.88 O
ATOM 27 OP2 A A 581 -4.153 103.824 100.314 1.00 73.13 O
ATOM 28 O5' A A 581 -1.883 104.716 99.803 1.00 71.73 O
TER
ATOM 1 O3' G B 552 -5.941 94.152 96.850 1.00 75.35 O
ATOM 2 P A B 553 -5.241 93.367 98.056 1.00 75.23 P
ATOM 3 OP1 A B 553 -5.686 91.957 97.982 1.00 75.24 O
ATOM 4 OP2 A B 553 -5.440 94.132 99.299 1.00 76.31 O
ATOM 5 O5' A B 553 -3.694 93.408 97.694 1.00 75.02 O
ATOM 6 C5' A B 553 -3.175 92.569 96.648 1.00 74.27 C
ATOM 7 C4' A B 553 -1.677 92.725 96.530 1.00 71.97 C
ATOM 8 O4' A B 553 -1.349 94.059 96.068 1.00 70.51 O
ATOM 9 C3' A B 553 -0.874 92.576 97.809 1.00 70.86 C
ATOM 10 O3' A B 553 -0.686 91.198 98.140 1.00 70.82 O
ATOM 11 C2' A B 553 0.426 93.266 97.419 1.00 69.88 C
ATOM 12 O2' A B 553 1.188 92.471 96.540 1.00 70.79 O
ATOM 13 C1' A B 553 -0.095 94.441 96.595 1.00 68.93 C
ATOM 14 N9 A B 553 -0.267 95.681 97.345 1.00 67.60 N
ATOM 15 C8 A B 553 -1.435 96.254 97.779 1.00 67.41 C
ATOM 16 N7 A B 553 -1.266 97.412 98.371 1.00 66.81 N
ATOM 17 C5 A B 553 0.108 97.608 98.334 1.00 66.22 C
ATOM 18 C6 A B 553 0.928 98.657 98.781 1.00 65.26 C
ATOM 19 N6 A B 553 0.469 99.767 99.348 1.00 65.43 N
ATOM 20 N1 A B 553 2.257 98.529 98.611 1.00 64.77 N
ATOM 21 C2 A B 553 2.721 97.430 98.013 1.00 65.30 C
ATOM 22 N3 A B 553 2.053 96.387 97.533 1.00 66.30 N
ATOM 23 C4 A B 553 0.735 96.539 97.727 1.00 66.59 C
ATOM 24 P A B 554 -0.855 90.702 99.667 1.00 71.45 P
ATOM 25 OP1 A B 554 -1.134 89.237 99.601 1.00 70.60 O
ATOM 26 OP2 A B 554 -1.803 91.603 100.384 1.00 69.47 O
ATOM 27 O5' A B 554 0.587 90.923 100.306 1.00 67.98 O
TER
Atoms:
OP1: (-6.065,105.120,104.680)
OP2: (-7.626,103.249,103.868)
C3': (-2.990,102.038,102.274)
C1': (-2.996,99.895,103.250)
C5': (-3.835,103.169,104.408)
O6: (-7.293,96.106,101.530)
O4': (-3.237,100.851,104.270)
C8: (-5.523,99.640,103.186)
C2: (-3.741,96.083,101.404)
C6: (-6.135,96.520,101.685)
C5: (-5.701,97.735,102.262)
C4: (-4.351,97.976,102.357)
P: (-6.421,103.684,104.624)
C4': (-2.893,102.172,103.785)
C2': (-2.449,100.639,102.032)
O2': (-1.038,100.578,102.038)
N1: (-5.061,95.743,101.271)
N2: (-2.857,95.201,100.928)
N3: (-3.324,97.202,101.956)
N7: (-6.429,98.794,102.785)
N9: (-4.243,99.203,102.950)
O5': (-5.192,102.846,104.053)
O3': (-2.196,103.002,101.614)
OP2: (-7.626,103.249,103.868)
C3': (-2.990,102.038,102.274)
C1': (-2.996,99.895,103.250)
C5': (-3.835,103.169,104.408)
O6: (-7.293,96.106,101.530)
O4': (-3.237,100.851,104.270)
C8: (-5.523,99.640,103.186)
C2: (-3.741,96.083,101.404)
C6: (-6.135,96.520,101.685)
C5: (-5.701,97.735,102.262)
C4: (-4.351,97.976,102.357)
P: (-6.421,103.684,104.624)
C4': (-2.893,102.172,103.785)
C2': (-2.449,100.639,102.032)
O2': (-1.038,100.578,102.038)
N1: (-5.061,95.743,101.271)
N2: (-2.857,95.201,100.928)
N3: (-3.324,97.202,101.956)
N7: (-6.429,98.794,102.785)
N9: (-4.243,99.203,102.950)
O5': (-5.192,102.846,104.053)
O3': (-2.196,103.002,101.614)
OP1: (-5.686,91.957,97.982)
OP2: (-5.440,94.132,99.299)
C3': (-0.874,92.576,97.809)
C1': (-0.095,94.441,96.595)
C5': (-3.175,92.569,96.648)
O4': (-1.349,94.059,96.068)
C8: (-1.435,96.254,97.779)
O2': (1.188,92.471,96.540)
C6: (0.928,98.657,98.781)
C5: (0.108,97.608,98.334)
C4: (0.735,96.539,97.727)
P: (-5.241,93.367,98.056)
C4': (-1.677,92.725,96.530)
C2': (0.426,93.266,97.419)
C2: (2.721,97.430,98.013)
N1: (2.257,98.529,98.611)
N3: (2.053,96.387,97.533)
N6: (0.469,99.767,99.348)
N7: (-1.266,97.412,98.371)
N9: (-0.267,95.681,97.345)
O5': (-3.694,93.408,97.694)
O3': (-0.686,91.198,98.140)
OP2: (-5.440,94.132,99.299)
C3': (-0.874,92.576,97.809)
C1': (-0.095,94.441,96.595)
C5': (-3.175,92.569,96.648)
O4': (-1.349,94.059,96.068)
C8: (-1.435,96.254,97.779)
O2': (1.188,92.471,96.540)
C6: (0.928,98.657,98.781)
C5: (0.108,97.608,98.334)
C4: (0.735,96.539,97.727)
P: (-5.241,93.367,98.056)
C4': (-1.677,92.725,96.530)
C2': (0.426,93.266,97.419)
C2: (2.721,97.430,98.013)
N1: (2.257,98.529,98.611)
N3: (2.053,96.387,97.533)
N6: (0.469,99.767,99.348)
N7: (-1.266,97.412,98.371)
N9: (-0.267,95.681,97.345)
O5': (-3.694,93.408,97.694)
O3': (-0.686,91.198,98.140)
Image (generated by PyMOL):