Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:01217:01056
Extra
PDB:
ATOM 1 O3' C A1216 12.466 103.995 113.040 1.00 48.51 O
ATOM 2 P G A1217 12.446 103.785 111.451 1.00 46.94 P
ATOM 3 OP1 G A1217 12.147 105.129 110.916 1.00 46.06 O
ATOM 4 OP2 G A1217 11.579 102.635 111.094 1.00 47.07 O
ATOM 5 O5' G A1217 13.939 103.372 111.079 1.00 48.75 O
ATOM 6 C5' G A1217 15.062 104.235 111.365 1.00 47.14 C
ATOM 7 C4' G A1217 16.351 103.502 111.075 1.00 48.41 C
ATOM 8 O4' G A1217 16.535 102.428 112.030 1.00 48.19 O
ATOM 9 C3' G A1217 16.366 102.824 109.717 1.00 48.70 C
ATOM 10 O3' G A1217 16.777 103.748 108.716 1.00 50.84 O
ATOM 11 C2' G A1217 17.335 101.664 109.915 1.00 48.28 C
ATOM 12 O2' G A1217 18.689 102.027 109.784 1.00 50.08 O
ATOM 13 C1' G A1217 17.060 101.282 111.371 1.00 48.03 C
ATOM 14 N9 G A1217 16.103 100.193 111.530 1.00 47.55 N
ATOM 15 C8 G A1217 14.734 100.298 111.519 1.00 47.91 C
ATOM 16 N7 G A1217 14.132 99.158 111.709 1.00 47.85 N
ATOM 17 C5 G A1217 15.162 98.243 111.848 1.00 46.72 C
ATOM 18 C6 G A1217 15.116 96.855 112.079 1.00 47.52 C
ATOM 19 O6 G A1217 14.122 96.132 112.207 1.00 51.50 O
ATOM 20 N1 G A1217 16.392 96.307 112.158 1.00 46.44 N
ATOM 21 C2 G A1217 17.564 97.009 112.025 1.00 44.68 C
ATOM 22 N2 G A1217 18.697 96.296 112.119 1.00 41.39 N
ATOM 23 N3 G A1217 17.619 98.313 111.812 1.00 45.86 N
ATOM 24 C4 G A1217 16.387 98.863 111.735 1.00 47.20 C
ATOM 25 P A A1218 16.172 103.642 107.232 1.00 54.35 P
ATOM 26 OP1 A A1218 16.299 105.001 106.640 1.00 53.09 O
ATOM 27 OP2 A A1218 14.835 102.988 107.290 1.00 53.80 O
ATOM 28 O5' A A1218 17.177 102.655 106.485 1.00 49.71 O
TER
ATOM 1 O3' U B1055 15.355 92.150 111.160 1.00 44.62 O
ATOM 2 P A B1056 16.745 92.399 111.929 1.00 44.48 P
ATOM 3 OP1 A B1056 17.064 91.145 112.639 1.00 44.75 O
ATOM 4 OP2 A B1056 16.654 93.672 112.683 1.00 38.86 O
ATOM 5 O5' A B1056 17.814 92.555 110.762 1.00 43.41 O
ATOM 6 C5' A B1056 18.275 91.406 110.035 1.00 44.78 C
ATOM 7 C4' A B1056 19.520 91.749 109.255 1.00 46.46 C
ATOM 8 O4' A B1056 19.210 92.724 108.223 1.00 45.18 O
ATOM 9 C3' A B1056 20.637 92.399 110.061 1.00 45.28 C
ATOM 10 O3' A B1056 21.397 91.394 110.734 1.00 45.88 O
ATOM 11 C2' A B1056 21.446 93.084 108.967 1.00 44.00 C
ATOM 12 O2' A B1056 22.263 92.158 108.281 1.00 43.01 O
ATOM 13 C1' A B1056 20.341 93.546 108.006 1.00 44.59 C
ATOM 14 N9 A B1056 19.940 94.952 108.122 1.00 43.12 N
ATOM 15 C8 A B1056 18.808 95.474 108.691 1.00 43.52 C
ATOM 16 N7 A B1056 18.725 96.782 108.606 1.00 41.87 N
ATOM 17 C5 A B1056 19.882 97.146 107.939 1.00 42.42 C
ATOM 18 C6 A B1056 20.389 98.397 107.534 1.00 42.01 C
ATOM 19 N6 A B1056 19.755 99.557 107.731 1.00 41.37 N
ATOM 20 N1 A B1056 21.583 98.415 106.910 1.00 40.38 N
ATOM 21 C2 A B1056 22.212 97.252 106.694 1.00 42.18 C
ATOM 22 N3 A B1056 21.836 96.016 107.011 1.00 42.21 N
ATOM 23 C4 A B1056 20.647 96.031 107.643 1.00 43.91 C
ATOM 24 P A B1057 21.934 91.642 112.229 1.00 45.68 P
ATOM 25 OP1 A B1057 22.455 90.318 112.638 1.00 43.52 O
ATOM 26 OP2 A B1057 20.916 92.325 113.060 1.00 44.92 O
ATOM 27 O5' A B1057 23.153 92.649 112.060 1.00 45.77 O
TER
ATOM 2 P G A1217 12.446 103.785 111.451 1.00 46.94 P
ATOM 3 OP1 G A1217 12.147 105.129 110.916 1.00 46.06 O
ATOM 4 OP2 G A1217 11.579 102.635 111.094 1.00 47.07 O
ATOM 5 O5' G A1217 13.939 103.372 111.079 1.00 48.75 O
ATOM 6 C5' G A1217 15.062 104.235 111.365 1.00 47.14 C
ATOM 7 C4' G A1217 16.351 103.502 111.075 1.00 48.41 C
ATOM 8 O4' G A1217 16.535 102.428 112.030 1.00 48.19 O
ATOM 9 C3' G A1217 16.366 102.824 109.717 1.00 48.70 C
ATOM 10 O3' G A1217 16.777 103.748 108.716 1.00 50.84 O
ATOM 11 C2' G A1217 17.335 101.664 109.915 1.00 48.28 C
ATOM 12 O2' G A1217 18.689 102.027 109.784 1.00 50.08 O
ATOM 13 C1' G A1217 17.060 101.282 111.371 1.00 48.03 C
ATOM 14 N9 G A1217 16.103 100.193 111.530 1.00 47.55 N
ATOM 15 C8 G A1217 14.734 100.298 111.519 1.00 47.91 C
ATOM 16 N7 G A1217 14.132 99.158 111.709 1.00 47.85 N
ATOM 17 C5 G A1217 15.162 98.243 111.848 1.00 46.72 C
ATOM 18 C6 G A1217 15.116 96.855 112.079 1.00 47.52 C
ATOM 19 O6 G A1217 14.122 96.132 112.207 1.00 51.50 O
ATOM 20 N1 G A1217 16.392 96.307 112.158 1.00 46.44 N
ATOM 21 C2 G A1217 17.564 97.009 112.025 1.00 44.68 C
ATOM 22 N2 G A1217 18.697 96.296 112.119 1.00 41.39 N
ATOM 23 N3 G A1217 17.619 98.313 111.812 1.00 45.86 N
ATOM 24 C4 G A1217 16.387 98.863 111.735 1.00 47.20 C
ATOM 25 P A A1218 16.172 103.642 107.232 1.00 54.35 P
ATOM 26 OP1 A A1218 16.299 105.001 106.640 1.00 53.09 O
ATOM 27 OP2 A A1218 14.835 102.988 107.290 1.00 53.80 O
ATOM 28 O5' A A1218 17.177 102.655 106.485 1.00 49.71 O
TER
ATOM 1 O3' U B1055 15.355 92.150 111.160 1.00 44.62 O
ATOM 2 P A B1056 16.745 92.399 111.929 1.00 44.48 P
ATOM 3 OP1 A B1056 17.064 91.145 112.639 1.00 44.75 O
ATOM 4 OP2 A B1056 16.654 93.672 112.683 1.00 38.86 O
ATOM 5 O5' A B1056 17.814 92.555 110.762 1.00 43.41 O
ATOM 6 C5' A B1056 18.275 91.406 110.035 1.00 44.78 C
ATOM 7 C4' A B1056 19.520 91.749 109.255 1.00 46.46 C
ATOM 8 O4' A B1056 19.210 92.724 108.223 1.00 45.18 O
ATOM 9 C3' A B1056 20.637 92.399 110.061 1.00 45.28 C
ATOM 10 O3' A B1056 21.397 91.394 110.734 1.00 45.88 O
ATOM 11 C2' A B1056 21.446 93.084 108.967 1.00 44.00 C
ATOM 12 O2' A B1056 22.263 92.158 108.281 1.00 43.01 O
ATOM 13 C1' A B1056 20.341 93.546 108.006 1.00 44.59 C
ATOM 14 N9 A B1056 19.940 94.952 108.122 1.00 43.12 N
ATOM 15 C8 A B1056 18.808 95.474 108.691 1.00 43.52 C
ATOM 16 N7 A B1056 18.725 96.782 108.606 1.00 41.87 N
ATOM 17 C5 A B1056 19.882 97.146 107.939 1.00 42.42 C
ATOM 18 C6 A B1056 20.389 98.397 107.534 1.00 42.01 C
ATOM 19 N6 A B1056 19.755 99.557 107.731 1.00 41.37 N
ATOM 20 N1 A B1056 21.583 98.415 106.910 1.00 40.38 N
ATOM 21 C2 A B1056 22.212 97.252 106.694 1.00 42.18 C
ATOM 22 N3 A B1056 21.836 96.016 107.011 1.00 42.21 N
ATOM 23 C4 A B1056 20.647 96.031 107.643 1.00 43.91 C
ATOM 24 P A B1057 21.934 91.642 112.229 1.00 45.68 P
ATOM 25 OP1 A B1057 22.455 90.318 112.638 1.00 43.52 O
ATOM 26 OP2 A B1057 20.916 92.325 113.060 1.00 44.92 O
ATOM 27 O5' A B1057 23.153 92.649 112.060 1.00 45.77 O
TER
Atoms:
OP1: (12.147,105.129,110.916)
OP2: (11.579,102.635,111.094)
C3': (16.366,102.824,109.717)
C1': (17.060,101.282,111.371)
C5': (15.062,104.235,111.365)
O6: (14.122,96.132,112.207)
O4': (16.535,102.428,112.030)
C8: (14.734,100.298,111.519)
C2: (17.564,97.009,112.025)
C6: (15.116,96.855,112.079)
C5: (15.162,98.243,111.848)
C4: (16.387,98.863,111.735)
P: (12.446,103.785,111.451)
C4': (16.351,103.502,111.075)
C2': (17.335,101.664,109.915)
O2': (18.689,102.027,109.784)
N1: (16.392,96.307,112.158)
N2: (18.697,96.296,112.119)
N3: (17.619,98.313,111.812)
N7: (14.132,99.158,111.709)
N9: (16.103,100.193,111.530)
O5': (13.939,103.372,111.079)
O3': (16.777,103.748,108.716)
OP2: (11.579,102.635,111.094)
C3': (16.366,102.824,109.717)
C1': (17.060,101.282,111.371)
C5': (15.062,104.235,111.365)
O6: (14.122,96.132,112.207)
O4': (16.535,102.428,112.030)
C8: (14.734,100.298,111.519)
C2: (17.564,97.009,112.025)
C6: (15.116,96.855,112.079)
C5: (15.162,98.243,111.848)
C4: (16.387,98.863,111.735)
P: (12.446,103.785,111.451)
C4': (16.351,103.502,111.075)
C2': (17.335,101.664,109.915)
O2': (18.689,102.027,109.784)
N1: (16.392,96.307,112.158)
N2: (18.697,96.296,112.119)
N3: (17.619,98.313,111.812)
N7: (14.132,99.158,111.709)
N9: (16.103,100.193,111.530)
O5': (13.939,103.372,111.079)
O3': (16.777,103.748,108.716)
OP1: (17.064,91.145,112.639)
OP2: (16.654,93.672,112.683)
C3': (20.637,92.399,110.061)
C1': (20.341,93.546,108.006)
C5': (18.275,91.406,110.035)
O4': (19.210,92.724,108.223)
C8: (18.808,95.474,108.691)
O2': (22.263,92.158,108.281)
C6: (20.389,98.397,107.534)
C5: (19.882,97.146,107.939)
C4: (20.647,96.031,107.643)
P: (16.745,92.399,111.929)
C4': (19.520,91.749,109.255)
C2': (21.446,93.084,108.967)
C2: (22.212,97.252,106.694)
N1: (21.583,98.415,106.910)
N3: (21.836,96.016,107.011)
N6: (19.755,99.557,107.731)
N7: (18.725,96.782,108.606)
N9: (19.940,94.952,108.122)
O5': (17.814,92.555,110.762)
O3': (21.397,91.394,110.734)
OP2: (16.654,93.672,112.683)
C3': (20.637,92.399,110.061)
C1': (20.341,93.546,108.006)
C5': (18.275,91.406,110.035)
O4': (19.210,92.724,108.223)
C8: (18.808,95.474,108.691)
O2': (22.263,92.158,108.281)
C6: (20.389,98.397,107.534)
C5: (19.882,97.146,107.939)
C4: (20.647,96.031,107.643)
P: (16.745,92.399,111.929)
C4': (19.520,91.749,109.255)
C2': (21.446,93.084,108.967)
C2: (22.212,97.252,106.694)
N1: (21.583,98.415,106.910)
N3: (21.836,96.016,107.011)
N6: (19.755,99.557,107.731)
N7: (18.725,96.782,108.606)
N9: (19.940,94.952,108.122)
O5': (17.814,92.555,110.762)
O3': (21.397,91.394,110.734)
Image (generated by PyMOL):