ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2QUX:C14:C12

Extra

PDB:
ATOM 1 O3' U A 13 -7.895 -18.444 31.146 1.00 54.60 O
ATOM 2 P G A 14 -6.637 -18.804 30.259 1.00 36.00 P
ATOM 3 OP1 G A 14 -6.737 -17.963 29.041 1.00 41.34 O
ATOM 4 OP2 G A 14 -6.453 -20.284 30.254 1.00 41.04 O
ATOM 5 O5' G A 14 -5.436 -18.232 31.157 1.00 29.88 O
ATOM 6 C5' G A 14 -5.214 -16.868 31.327 1.00 35.10 C
ATOM 7 C4' G A 14 -5.101 -16.578 32.800 1.00 34.03 C
ATOM 8 O4' G A 14 -4.519 -15.267 32.937 1.00 36.29 O
ATOM 9 C3' G A 14 -6.454 -16.513 33.506 1.00 47.01 C
ATOM 10 O3' G A 14 -6.352 -16.890 34.843 1.00 36.52 O
ATOM 11 C2' G A 14 -6.816 -15.046 33.442 1.00 39.21 C
ATOM 12 O2' G A 14 -7.681 -14.590 34.455 1.00 39.08 O
ATOM 13 C1' G A 14 -5.419 -14.456 33.641 1.00 33.52 C
ATOM 14 N9 G A 14 -5.313 -13.082 33.189 1.00 23.27 N
ATOM 15 C8 G A 14 -4.845 -12.036 33.936 1.00 20.25 C
ATOM 16 N7 G A 14 -4.875 -10.924 33.296 1.00 31.48 N
ATOM 17 C5 G A 14 -5.399 -11.274 32.060 1.00 27.54 C
ATOM 18 C6 G A 14 -5.619 -10.482 30.928 1.00 36.31 C
ATOM 19 O6 G A 14 -5.442 -9.277 30.826 1.00 29.43 O
ATOM 20 N1 G A 14 -6.106 -11.215 29.857 1.00 27.12 N
ATOM 21 C2 G A 14 -6.337 -12.569 29.845 1.00 31.25 C
ATOM 22 N2 G A 14 -6.820 -13.085 28.705 1.00 20.17 N
ATOM 23 N3 G A 14 -6.123 -13.332 30.892 1.00 28.39 N
ATOM 24 C4 G A 14 -5.664 -12.605 31.959 1.00 26.71 C
ATOM 25 P G A 15 -6.698 -18.333 35.360 1.00 38.65 P
ATOM 26 OP1 G A 15 -8.021 -18.630 34.786 1.00 25.97 O
ATOM 27 OP2 G A 15 -6.356 -18.323 36.804 1.00 39.74 O
ATOM 28 O5' G A 15 -5.697 -19.340 34.666 1.00 48.48 O
TER

ATOM 1 O3' U B 11 -8.901 -8.584 29.201 1.00 35.15 O
ATOM 2 P A B 12 -8.839 -9.485 27.895 1.00 33.61 P
ATOM 3 OP1 A B 12 -7.425 -9.491 27.487 1.00 40.91 O
ATOM 4 OP2 A B 12 -9.891 -9.091 26.936 1.00 33.69 O
ATOM 5 O5' A B 12 -9.144 -10.933 28.488 1.00 33.73 O
ATOM 6 C5' A B 12 -10.309 -11.307 29.147 1.00 29.23 C
ATOM 7 C4' A B 12 -9.939 -12.195 30.328 1.00 32.61 C
ATOM 8 O4' A B 12 -8.914 -11.523 31.080 1.00 31.68 O
ATOM 9 C3' A B 12 -11.043 -12.473 31.339 1.00 30.09 C
ATOM 10 O3' A B 12 -11.147 -13.871 31.629 1.00 27.26 O
ATOM 11 C2' A B 12 -10.643 -11.681 32.574 1.00 29.22 C
ATOM 12 O2' A B 12 -11.121 -12.303 33.765 1.00 24.46 O
ATOM 13 C1' A B 12 -9.125 -11.648 32.465 1.00 23.42 C
ATOM 14 N9 A B 12 -8.591 -10.523 33.252 1.00 18.40 N
ATOM 15 C8 A B 12 -8.529 -9.211 32.902 1.00 16.25 C
ATOM 16 N7 A B 12 -8.019 -8.425 33.827 1.00 32.31 N
ATOM 17 C5 A B 12 -7.686 -9.298 34.849 1.00 18.66 C
ATOM 18 C6 A B 12 -7.142 -9.103 36.134 1.00 21.51 C
ATOM 19 N6 A B 12 -6.759 -7.918 36.599 1.00 22.79 N
ATOM 20 N1 A B 12 -6.936 -10.181 36.916 1.00 25.06 N
ATOM 21 C2 A B 12 -7.263 -11.385 36.425 1.00 22.12 C
ATOM 22 N3 A B 12 -7.810 -11.690 35.247 1.00 19.64 N
ATOM 23 C4 A B 12 -8.012 -10.592 34.500 1.00 24.76 C
ATOM 24 P U B 13 -12.107 -14.798 30.725 1.00 39.36 P
ATOM 25 OP1 U B 13 -11.715 -14.686 29.300 1.00 56.71 O
ATOM 26 OP2 U B 13 -13.514 -14.597 31.094 1.00 39.77 O
ATOM 27 O5' U B 13 -11.641 -16.195 31.317 1.00 36.28 O
TER

Atoms:
OP1: (-6.737,-17.963,29.041)
OP2: (-6.453,-20.284,30.254)
C3': (-6.454,-16.513,33.506)
C1': (-5.419,-14.456,33.641)
C5': (-5.214,-16.868,31.327)
O6: (-5.442,-9.277,30.826)
O4': (-4.519,-15.267,32.937)
C8: (-4.845,-12.036,33.936)
C2: (-6.337,-12.569,29.845)
C6: (-5.619,-10.482,30.928)
C5: (-5.399,-11.274,32.060)
C4: (-5.664,-12.605,31.959)
P: (-6.637,-18.804,30.259)
C4': (-5.101,-16.578,32.800)
C2': (-6.816,-15.046,33.442)
O2': (-7.681,-14.590,34.455)
N1: (-6.106,-11.215,29.857)
N2: (-6.820,-13.085,28.705)
N3: (-6.123,-13.332,30.892)
N7: (-4.875,-10.924,33.296)
N9: (-5.313,-13.082,33.189)
O5': (-5.436,-18.232,31.157)
O3': (-6.352,-16.890,34.843)
OP1: (-7.425,-9.491,27.487)
OP2: (-9.891,-9.091,26.936)
C3': (-11.043,-12.473,31.339)
C1': (-9.125,-11.648,32.465)
C5': (-10.309,-11.307,29.147)
O4': (-8.914,-11.523,31.080)
C8: (-8.529,-9.211,32.902)
O2': (-11.121,-12.303,33.765)
C6: (-7.142,-9.103,36.134)
C5: (-7.686,-9.298,34.849)
C4: (-8.012,-10.592,34.500)
P: (-8.839,-9.485,27.895)
C4': (-9.939,-12.195,30.328)
C2': (-10.643,-11.681,32.574)
C2: (-7.263,-11.385,36.425)
N1: (-6.936,-10.181,36.916)
N3: (-7.810,-11.690,35.247)
N6: (-6.759,-7.918,36.599)
N7: (-8.019,-8.425,33.827)
N9: (-8.591,-10.523,33.252)
O5': (-9.144,-10.933,28.488)
O3': (-11.147,-13.871,31.629)
Image (generated by PyMOL):
PyMOL image
show in jmol