Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHD:A428:A474
Extra
PDB:
ATOM 1 O3' U A 427 165.407-209.081-231.877 1.00137.34 O
ATOM 2 P G A 428 165.778-210.090-230.684 1.00167.53 P
ATOM 3 OP1 G A 428 167.160-210.574-230.937 1.00150.44 O
ATOM 4 OP2 G A 428 164.683-211.082-230.595 1.00155.26 O
ATOM 5 O5' G A 428 165.754-209.147-229.399 1.00163.20 O
ATOM 6 C5' G A 428 166.657-208.054-229.276 1.00159.67 C
ATOM 7 C4' G A 428 166.339-207.195-228.077 1.00159.02 C
ATOM 8 O4' G A 428 164.930-206.829-228.105 1.00156.97 O
ATOM 9 C3' G A 428 166.601-207.846-226.719 1.00158.69 C
ATOM 10 O3' G A 428 167.201-206.891-225.840 1.00159.18 O
ATOM 11 C2' G A 428 165.197-208.219-226.226 1.00157.09 C
ATOM 12 O2' G A 428 165.052-208.246-224.822 1.00155.31 O
ATOM 13 C1' G A 428 164.322-207.141-226.867 1.00159.23 C
ATOM 14 N9 G A 428 162.944-207.577-227.136 1.00149.12 N
ATOM 15 C8 G A 428 162.576-208.405-228.164 1.00149.20 C
ATOM 16 N7 G A 428 161.298-208.656-228.195 1.00149.80 N
ATOM 17 C5 G A 428 160.764-207.951-227.126 1.00150.62 C
ATOM 18 C6 G A 428 159.411-207.845-226.665 1.00153.50 C
ATOM 19 O6 G A 428 158.369-208.359-227.107 1.00151.81 O
ATOM 20 N1 G A 428 159.314-207.026-225.549 1.00150.96 N
ATOM 21 C2 G A 428 160.371-206.393-224.951 1.00148.59 C
ATOM 22 N2 G A 428 160.041-205.650-223.882 1.00147.89 N
ATOM 23 N3 G A 428 161.635-206.485-225.366 1.00147.54 N
ATOM 24 C4 G A 428 161.771-207.275-226.457 1.00147.50 C
ATOM 25 P A A 429 168.801-206.661-225.864 1.00135.98 P
ATOM 26 OP1 A A 429 169.244-206.759-227.282 1.00140.48 O
ATOM 27 OP2 A A 429 169.385-207.592-224.871 1.00142.59 O
ATOM 28 O5' A A 429 168.956-205.153-225.354 1.00135.50 O
TER
ATOM 1 O3' U B 473 156.625-207.805-221.952 1.00142.52 O
ATOM 2 P A B 474 156.103-207.038-223.266 1.00172.52 P
ATOM 3 OP1 A B 474 154.652-207.322-223.386 1.00189.11 O
ATOM 4 OP2 A B 474 156.999-207.423-224.383 1.00179.75 O
ATOM 5 O5' A B 474 156.324-205.502-222.897 1.00140.00 O
ATOM 6 C5' A B 474 155.458-204.489-223.415 1.00136.58 C
ATOM 7 C4' A B 474 156.026-203.099-223.220 1.00134.66 C
ATOM 8 O4' A B 474 157.423-203.092-223.640 1.00128.95 O
ATOM 9 C3' A B 474 155.337-201.994-224.030 1.00131.85 C
ATOM 10 O3' A B 474 155.413-200.748-223.326 1.00134.34 O
ATOM 11 C2' A B 474 156.225-201.913-225.265 1.00129.16 C
ATOM 12 O2' A B 474 156.136-200.694-225.975 1.00130.42 O
ATOM 13 C1' A B 474 157.603-202.108-224.633 1.00125.78 C
ATOM 14 N9 A B 474 158.640-202.563-225.558 1.00108.95 N
ATOM 15 C8 A B 474 158.664-203.650-226.379 1.00112.41 C
ATOM 16 N7 A B 474 159.771-203.732-227.082 1.00118.02 N
ATOM 17 C5 A B 474 160.536-202.631-226.704 1.00114.38 C
ATOM 18 C6 A B 474 161.818-202.135-227.074 1.00108.31 C
ATOM 19 N6 A B 474 162.661-202.674-227.959 1.00110.71 N
ATOM 20 N1 A B 474 162.245-201.010-226.484 1.00106.80 N
ATOM 21 C2 A B 474 161.445-200.424-225.586 1.00114.13 C
ATOM 22 N3 A B 474 160.238-200.783-225.154 1.00117.36 N
ATOM 23 C4 A B 474 159.833-201.910-225.760 1.00113.85 C
ATOM 24 P A B 475 154.822-200.588-221.838 1.00185.24 P
ATOM 25 OP1 A B 475 154.282-201.908-221.427 1.00140.08 O
ATOM 26 OP2 A B 475 153.904-199.420-221.863 1.00135.59 O
ATOM 27 O5' A B 475 156.125-200.237-220.976 1.00162.26 O
TER
ATOM 2 P G A 428 165.778-210.090-230.684 1.00167.53 P
ATOM 3 OP1 G A 428 167.160-210.574-230.937 1.00150.44 O
ATOM 4 OP2 G A 428 164.683-211.082-230.595 1.00155.26 O
ATOM 5 O5' G A 428 165.754-209.147-229.399 1.00163.20 O
ATOM 6 C5' G A 428 166.657-208.054-229.276 1.00159.67 C
ATOM 7 C4' G A 428 166.339-207.195-228.077 1.00159.02 C
ATOM 8 O4' G A 428 164.930-206.829-228.105 1.00156.97 O
ATOM 9 C3' G A 428 166.601-207.846-226.719 1.00158.69 C
ATOM 10 O3' G A 428 167.201-206.891-225.840 1.00159.18 O
ATOM 11 C2' G A 428 165.197-208.219-226.226 1.00157.09 C
ATOM 12 O2' G A 428 165.052-208.246-224.822 1.00155.31 O
ATOM 13 C1' G A 428 164.322-207.141-226.867 1.00159.23 C
ATOM 14 N9 G A 428 162.944-207.577-227.136 1.00149.12 N
ATOM 15 C8 G A 428 162.576-208.405-228.164 1.00149.20 C
ATOM 16 N7 G A 428 161.298-208.656-228.195 1.00149.80 N
ATOM 17 C5 G A 428 160.764-207.951-227.126 1.00150.62 C
ATOM 18 C6 G A 428 159.411-207.845-226.665 1.00153.50 C
ATOM 19 O6 G A 428 158.369-208.359-227.107 1.00151.81 O
ATOM 20 N1 G A 428 159.314-207.026-225.549 1.00150.96 N
ATOM 21 C2 G A 428 160.371-206.393-224.951 1.00148.59 C
ATOM 22 N2 G A 428 160.041-205.650-223.882 1.00147.89 N
ATOM 23 N3 G A 428 161.635-206.485-225.366 1.00147.54 N
ATOM 24 C4 G A 428 161.771-207.275-226.457 1.00147.50 C
ATOM 25 P A A 429 168.801-206.661-225.864 1.00135.98 P
ATOM 26 OP1 A A 429 169.244-206.759-227.282 1.00140.48 O
ATOM 27 OP2 A A 429 169.385-207.592-224.871 1.00142.59 O
ATOM 28 O5' A A 429 168.956-205.153-225.354 1.00135.50 O
TER
ATOM 1 O3' U B 473 156.625-207.805-221.952 1.00142.52 O
ATOM 2 P A B 474 156.103-207.038-223.266 1.00172.52 P
ATOM 3 OP1 A B 474 154.652-207.322-223.386 1.00189.11 O
ATOM 4 OP2 A B 474 156.999-207.423-224.383 1.00179.75 O
ATOM 5 O5' A B 474 156.324-205.502-222.897 1.00140.00 O
ATOM 6 C5' A B 474 155.458-204.489-223.415 1.00136.58 C
ATOM 7 C4' A B 474 156.026-203.099-223.220 1.00134.66 C
ATOM 8 O4' A B 474 157.423-203.092-223.640 1.00128.95 O
ATOM 9 C3' A B 474 155.337-201.994-224.030 1.00131.85 C
ATOM 10 O3' A B 474 155.413-200.748-223.326 1.00134.34 O
ATOM 11 C2' A B 474 156.225-201.913-225.265 1.00129.16 C
ATOM 12 O2' A B 474 156.136-200.694-225.975 1.00130.42 O
ATOM 13 C1' A B 474 157.603-202.108-224.633 1.00125.78 C
ATOM 14 N9 A B 474 158.640-202.563-225.558 1.00108.95 N
ATOM 15 C8 A B 474 158.664-203.650-226.379 1.00112.41 C
ATOM 16 N7 A B 474 159.771-203.732-227.082 1.00118.02 N
ATOM 17 C5 A B 474 160.536-202.631-226.704 1.00114.38 C
ATOM 18 C6 A B 474 161.818-202.135-227.074 1.00108.31 C
ATOM 19 N6 A B 474 162.661-202.674-227.959 1.00110.71 N
ATOM 20 N1 A B 474 162.245-201.010-226.484 1.00106.80 N
ATOM 21 C2 A B 474 161.445-200.424-225.586 1.00114.13 C
ATOM 22 N3 A B 474 160.238-200.783-225.154 1.00117.36 N
ATOM 23 C4 A B 474 159.833-201.910-225.760 1.00113.85 C
ATOM 24 P A B 475 154.822-200.588-221.838 1.00185.24 P
ATOM 25 OP1 A B 475 154.282-201.908-221.427 1.00140.08 O
ATOM 26 OP2 A B 475 153.904-199.420-221.863 1.00135.59 O
ATOM 27 O5' A B 475 156.125-200.237-220.976 1.00162.26 O
TER
Atoms:
OP1: (167.160,-210.574,-230.937)
OP2: (164.683,-211.082,-230.595)
C3': (166.601,-207.846,-226.719)
C1': (164.322,-207.141,-226.867)
C5': (166.657,-208.054,-229.276)
O6: (158.369,-208.359,-227.107)
O4': (164.930,-206.829,-228.105)
C8: (162.576,-208.405,-228.164)
C2: (160.371,-206.393,-224.951)
C6: (159.411,-207.845,-226.665)
C5: (160.764,-207.951,-227.126)
C4: (161.771,-207.275,-226.457)
P: (165.778,-210.090,-230.684)
C4': (166.339,-207.195,-228.077)
C2': (165.197,-208.219,-226.226)
O2': (165.052,-208.246,-224.822)
N1: (159.314,-207.026,-225.549)
N2: (160.041,-205.650,-223.882)
N3: (161.635,-206.485,-225.366)
N7: (161.298,-208.656,-228.195)
N9: (162.944,-207.577,-227.136)
O5': (165.754,-209.147,-229.399)
O3': (167.201,-206.891,-225.840)
OP2: (164.683,-211.082,-230.595)
C3': (166.601,-207.846,-226.719)
C1': (164.322,-207.141,-226.867)
C5': (166.657,-208.054,-229.276)
O6: (158.369,-208.359,-227.107)
O4': (164.930,-206.829,-228.105)
C8: (162.576,-208.405,-228.164)
C2: (160.371,-206.393,-224.951)
C6: (159.411,-207.845,-226.665)
C5: (160.764,-207.951,-227.126)
C4: (161.771,-207.275,-226.457)
P: (165.778,-210.090,-230.684)
C4': (166.339,-207.195,-228.077)
C2': (165.197,-208.219,-226.226)
O2': (165.052,-208.246,-224.822)
N1: (159.314,-207.026,-225.549)
N2: (160.041,-205.650,-223.882)
N3: (161.635,-206.485,-225.366)
N7: (161.298,-208.656,-228.195)
N9: (162.944,-207.577,-227.136)
O5': (165.754,-209.147,-229.399)
O3': (167.201,-206.891,-225.840)
OP1: (154.652,-207.322,-223.386)
OP2: (156.999,-207.423,-224.383)
C3': (155.337,-201.994,-224.030)
C1': (157.603,-202.108,-224.633)
C5': (155.458,-204.489,-223.415)
O4': (157.423,-203.092,-223.640)
C8: (158.664,-203.650,-226.379)
O2': (156.136,-200.694,-225.975)
C6: (161.818,-202.135,-227.074)
C5: (160.536,-202.631,-226.704)
C4: (159.833,-201.910,-225.760)
P: (156.103,-207.038,-223.266)
C4': (156.026,-203.099,-223.220)
C2': (156.225,-201.913,-225.265)
C2: (161.445,-200.424,-225.586)
N1: (162.245,-201.010,-226.484)
N3: (160.238,-200.783,-225.154)
N6: (162.661,-202.674,-227.959)
N7: (159.771,-203.732,-227.082)
N9: (158.640,-202.563,-225.558)
O5': (156.324,-205.502,-222.897)
O3': (155.413,-200.748,-223.326)
OP2: (156.999,-207.423,-224.383)
C3': (155.337,-201.994,-224.030)
C1': (157.603,-202.108,-224.633)
C5': (155.458,-204.489,-223.415)
O4': (157.423,-203.092,-223.640)
C8: (158.664,-203.650,-226.379)
O2': (156.136,-200.694,-225.975)
C6: (161.818,-202.135,-227.074)
C5: (160.536,-202.631,-226.704)
C4: (159.833,-201.910,-225.760)
P: (156.103,-207.038,-223.266)
C4': (156.026,-203.099,-223.220)
C2': (156.225,-201.913,-225.265)
C2: (161.445,-200.424,-225.586)
N1: (162.245,-201.010,-226.484)
N3: (160.238,-200.783,-225.154)
N6: (162.661,-202.674,-227.959)
N7: (159.771,-203.732,-227.082)
N9: (158.640,-202.563,-225.558)
O5': (156.324,-205.502,-222.897)
O3': (155.413,-200.748,-223.326)
Image (generated by PyMOL):