Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CXC:0580:0553
Extra
PDB:
ATOM 1 O3' A A 579 -5.947 104.120 106.625 1.00 72.04 O
ATOM 2 P G A 580 -5.907 104.591 105.090 1.00 72.89 P
ATOM 3 OP1 G A 580 -5.555 106.034 105.073 1.00 70.09 O
ATOM 4 OP2 G A 580 -7.138 104.126 104.404 1.00 72.09 O
ATOM 5 O5' G A 580 -4.713 103.747 104.461 1.00 73.43 O
ATOM 6 C5' G A 580 -3.363 103.920 104.905 1.00 70.79 C
ATOM 7 C4' G A 580 -2.460 102.979 104.161 1.00 70.16 C
ATOM 8 O4' G A 580 -2.734 101.613 104.562 1.00 69.73 O
ATOM 9 C3' G A 580 -2.620 102.981 102.653 1.00 70.46 C
ATOM 10 O3' G A 580 -1.829 103.995 102.076 1.00 71.85 O
ATOM 11 C2' G A 580 -2.088 101.602 102.273 1.00 71.18 C
ATOM 12 O2' G A 580 -0.675 101.544 102.171 1.00 72.04 O
ATOM 13 C1' G A 580 -2.543 100.746 103.460 1.00 70.22 C
ATOM 14 N9 G A 580 -3.798 100.050 103.189 1.00 70.05 N
ATOM 15 C8 G A 580 -5.069 100.498 103.452 1.00 71.43 C
ATOM 16 N7 G A 580 -5.998 99.669 103.056 1.00 71.70 N
ATOM 17 C5 G A 580 -5.298 98.605 102.509 1.00 71.27 C
ATOM 18 C6 G A 580 -5.768 97.393 101.917 1.00 72.81 C
ATOM 19 O6 G A 580 -6.936 96.994 101.767 1.00 73.76 O
ATOM 20 N1 G A 580 -4.715 96.602 101.484 1.00 72.82 N
ATOM 21 C2 G A 580 -3.389 96.915 101.610 1.00 72.16 C
ATOM 22 N2 G A 580 -2.536 96.011 101.123 1.00 72.37 N
ATOM 23 N3 G A 580 -2.937 98.029 102.170 1.00 70.56 N
ATOM 24 C4 G A 580 -3.939 98.822 102.590 1.00 70.20 C
ATOM 25 P A A 581 -2.517 105.290 101.409 1.00 75.21 P
ATOM 26 OP1 A A 581 -2.455 106.419 102.425 1.00 74.53 O
ATOM 27 OP2 A A 581 -3.813 104.967 100.710 1.00 75.41 O
ATOM 28 O5' A A 581 -1.480 105.672 100.265 1.00 76.21 O
TER
ATOM 1 O3' G B 552 -5.412 95.195 97.086 1.00 72.56 O
ATOM 2 P A B 553 -4.895 94.255 98.277 1.00 70.34 P
ATOM 3 OP1 A B 553 -5.484 92.911 98.098 1.00 68.84 O
ATOM 4 OP2 A B 553 -5.044 94.958 99.563 1.00 68.98 O
ATOM 5 O5' A B 553 -3.346 94.120 97.973 1.00 70.16 O
ATOM 6 C5' A B 553 -2.899 93.406 96.815 1.00 69.86 C
ATOM 7 C4' A B 553 -1.402 93.484 96.710 1.00 67.88 C
ATOM 8 O4' A B 553 -1.016 94.824 96.315 1.00 67.19 O
ATOM 9 C3' A B 553 -0.632 93.225 98.001 1.00 67.29 C
ATOM 10 O3' A B 553 -0.447 91.834 98.231 1.00 66.98 O
ATOM 11 C2' A B 553 0.687 93.934 97.730 1.00 67.37 C
ATOM 12 O2' A B 553 1.541 93.147 96.923 1.00 67.70 O
ATOM 13 C1' A B 553 0.232 95.141 96.905 1.00 66.88 C
ATOM 14 N9 A B 553 0.088 96.366 97.693 1.00 65.56 N
ATOM 15 C8 A B 553 -1.056 96.894 98.226 1.00 64.62 C
ATOM 16 N7 A B 553 -0.869 98.026 98.860 1.00 65.66 N
ATOM 17 C5 A B 553 0.495 98.256 98.744 1.00 64.89 C
ATOM 18 C6 A B 553 1.325 99.303 99.196 1.00 64.96 C
ATOM 19 N6 A B 553 0.889 100.353 99.892 1.00 64.29 N
ATOM 20 N1 A B 553 2.636 99.230 98.906 1.00 65.13 N
ATOM 21 C2 A B 553 3.079 98.174 98.214 1.00 65.63 C
ATOM 22 N3 A B 553 2.404 97.132 97.738 1.00 65.09 N
ATOM 23 C4 A B 553 1.099 97.236 98.038 1.00 65.51 C
ATOM 24 P A B 554 -0.599 91.239 99.717 1.00 67.22 P
ATOM 25 OP1 A B 554 -0.746 89.756 99.561 1.00 66.30 O
ATOM 26 OP2 A B 554 -1.613 92.008 100.478 1.00 66.72 O
ATOM 27 O5' A B 554 0.801 91.527 100.419 1.00 67.20 O
TER
ATOM 2 P G A 580 -5.907 104.591 105.090 1.00 72.89 P
ATOM 3 OP1 G A 580 -5.555 106.034 105.073 1.00 70.09 O
ATOM 4 OP2 G A 580 -7.138 104.126 104.404 1.00 72.09 O
ATOM 5 O5' G A 580 -4.713 103.747 104.461 1.00 73.43 O
ATOM 6 C5' G A 580 -3.363 103.920 104.905 1.00 70.79 C
ATOM 7 C4' G A 580 -2.460 102.979 104.161 1.00 70.16 C
ATOM 8 O4' G A 580 -2.734 101.613 104.562 1.00 69.73 O
ATOM 9 C3' G A 580 -2.620 102.981 102.653 1.00 70.46 C
ATOM 10 O3' G A 580 -1.829 103.995 102.076 1.00 71.85 O
ATOM 11 C2' G A 580 -2.088 101.602 102.273 1.00 71.18 C
ATOM 12 O2' G A 580 -0.675 101.544 102.171 1.00 72.04 O
ATOM 13 C1' G A 580 -2.543 100.746 103.460 1.00 70.22 C
ATOM 14 N9 G A 580 -3.798 100.050 103.189 1.00 70.05 N
ATOM 15 C8 G A 580 -5.069 100.498 103.452 1.00 71.43 C
ATOM 16 N7 G A 580 -5.998 99.669 103.056 1.00 71.70 N
ATOM 17 C5 G A 580 -5.298 98.605 102.509 1.00 71.27 C
ATOM 18 C6 G A 580 -5.768 97.393 101.917 1.00 72.81 C
ATOM 19 O6 G A 580 -6.936 96.994 101.767 1.00 73.76 O
ATOM 20 N1 G A 580 -4.715 96.602 101.484 1.00 72.82 N
ATOM 21 C2 G A 580 -3.389 96.915 101.610 1.00 72.16 C
ATOM 22 N2 G A 580 -2.536 96.011 101.123 1.00 72.37 N
ATOM 23 N3 G A 580 -2.937 98.029 102.170 1.00 70.56 N
ATOM 24 C4 G A 580 -3.939 98.822 102.590 1.00 70.20 C
ATOM 25 P A A 581 -2.517 105.290 101.409 1.00 75.21 P
ATOM 26 OP1 A A 581 -2.455 106.419 102.425 1.00 74.53 O
ATOM 27 OP2 A A 581 -3.813 104.967 100.710 1.00 75.41 O
ATOM 28 O5' A A 581 -1.480 105.672 100.265 1.00 76.21 O
TER
ATOM 1 O3' G B 552 -5.412 95.195 97.086 1.00 72.56 O
ATOM 2 P A B 553 -4.895 94.255 98.277 1.00 70.34 P
ATOM 3 OP1 A B 553 -5.484 92.911 98.098 1.00 68.84 O
ATOM 4 OP2 A B 553 -5.044 94.958 99.563 1.00 68.98 O
ATOM 5 O5' A B 553 -3.346 94.120 97.973 1.00 70.16 O
ATOM 6 C5' A B 553 -2.899 93.406 96.815 1.00 69.86 C
ATOM 7 C4' A B 553 -1.402 93.484 96.710 1.00 67.88 C
ATOM 8 O4' A B 553 -1.016 94.824 96.315 1.00 67.19 O
ATOM 9 C3' A B 553 -0.632 93.225 98.001 1.00 67.29 C
ATOM 10 O3' A B 553 -0.447 91.834 98.231 1.00 66.98 O
ATOM 11 C2' A B 553 0.687 93.934 97.730 1.00 67.37 C
ATOM 12 O2' A B 553 1.541 93.147 96.923 1.00 67.70 O
ATOM 13 C1' A B 553 0.232 95.141 96.905 1.00 66.88 C
ATOM 14 N9 A B 553 0.088 96.366 97.693 1.00 65.56 N
ATOM 15 C8 A B 553 -1.056 96.894 98.226 1.00 64.62 C
ATOM 16 N7 A B 553 -0.869 98.026 98.860 1.00 65.66 N
ATOM 17 C5 A B 553 0.495 98.256 98.744 1.00 64.89 C
ATOM 18 C6 A B 553 1.325 99.303 99.196 1.00 64.96 C
ATOM 19 N6 A B 553 0.889 100.353 99.892 1.00 64.29 N
ATOM 20 N1 A B 553 2.636 99.230 98.906 1.00 65.13 N
ATOM 21 C2 A B 553 3.079 98.174 98.214 1.00 65.63 C
ATOM 22 N3 A B 553 2.404 97.132 97.738 1.00 65.09 N
ATOM 23 C4 A B 553 1.099 97.236 98.038 1.00 65.51 C
ATOM 24 P A B 554 -0.599 91.239 99.717 1.00 67.22 P
ATOM 25 OP1 A B 554 -0.746 89.756 99.561 1.00 66.30 O
ATOM 26 OP2 A B 554 -1.613 92.008 100.478 1.00 66.72 O
ATOM 27 O5' A B 554 0.801 91.527 100.419 1.00 67.20 O
TER
Atoms:
OP1: (-5.555,106.034,105.073)
OP2: (-7.138,104.126,104.404)
C3': (-2.620,102.981,102.653)
C1': (-2.543,100.746,103.460)
C5': (-3.363,103.920,104.905)
O6: (-6.936,96.994,101.767)
O4': (-2.734,101.613,104.562)
C8: (-5.069,100.498,103.452)
C2: (-3.389,96.915,101.610)
C6: (-5.768,97.393,101.917)
C5: (-5.298,98.605,102.509)
C4: (-3.939,98.822,102.590)
P: (-5.907,104.591,105.090)
C4': (-2.460,102.979,104.161)
C2': (-2.088,101.602,102.273)
O2': (-0.675,101.544,102.171)
N1: (-4.715,96.602,101.484)
N2: (-2.536,96.011,101.123)
N3: (-2.937,98.029,102.170)
N7: (-5.998,99.669,103.056)
N9: (-3.798,100.050,103.189)
O5': (-4.713,103.747,104.461)
O3': (-1.829,103.995,102.076)
OP2: (-7.138,104.126,104.404)
C3': (-2.620,102.981,102.653)
C1': (-2.543,100.746,103.460)
C5': (-3.363,103.920,104.905)
O6: (-6.936,96.994,101.767)
O4': (-2.734,101.613,104.562)
C8: (-5.069,100.498,103.452)
C2: (-3.389,96.915,101.610)
C6: (-5.768,97.393,101.917)
C5: (-5.298,98.605,102.509)
C4: (-3.939,98.822,102.590)
P: (-5.907,104.591,105.090)
C4': (-2.460,102.979,104.161)
C2': (-2.088,101.602,102.273)
O2': (-0.675,101.544,102.171)
N1: (-4.715,96.602,101.484)
N2: (-2.536,96.011,101.123)
N3: (-2.937,98.029,102.170)
N7: (-5.998,99.669,103.056)
N9: (-3.798,100.050,103.189)
O5': (-4.713,103.747,104.461)
O3': (-1.829,103.995,102.076)
OP1: (-5.484,92.911,98.098)
OP2: (-5.044,94.958,99.563)
C3': (-0.632,93.225,98.001)
C1': (0.232,95.141,96.905)
C5': (-2.899,93.406,96.815)
O4': (-1.016,94.824,96.315)
C8: (-1.056,96.894,98.226)
O2': (1.541,93.147,96.923)
C6: (1.325,99.303,99.196)
C5: (0.495,98.256,98.744)
C4: (1.099,97.236,98.038)
P: (-4.895,94.255,98.277)
C4': (-1.402,93.484,96.710)
C2': (0.687,93.934,97.730)
C2: (3.079,98.174,98.214)
N1: (2.636,99.230,98.906)
N3: (2.404,97.132,97.738)
N6: (0.889,100.353,99.892)
N7: (-0.869,98.026,98.860)
N9: (0.088,96.366,97.693)
O5': (-3.346,94.120,97.973)
O3': (-0.447,91.834,98.231)
OP2: (-5.044,94.958,99.563)
C3': (-0.632,93.225,98.001)
C1': (0.232,95.141,96.905)
C5': (-2.899,93.406,96.815)
O4': (-1.016,94.824,96.315)
C8: (-1.056,96.894,98.226)
O2': (1.541,93.147,96.923)
C6: (1.325,99.303,99.196)
C5: (0.495,98.256,98.744)
C4: (1.099,97.236,98.038)
P: (-4.895,94.255,98.277)
C4': (-1.402,93.484,96.710)
C2': (0.687,93.934,97.730)
C2: (3.079,98.174,98.214)
N1: (2.636,99.230,98.906)
N3: (2.404,97.132,97.738)
N6: (0.889,100.353,99.892)
N7: (-0.869,98.026,98.860)
N9: (0.088,96.366,97.693)
O5': (-3.346,94.120,97.973)
O3': (-0.447,91.834,98.231)
Image (generated by PyMOL):