ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:0178:0423

Extra

PDB:
ATOM 1 O3' A A 177 71.627 107.838 24.669 1.00 39.65 O
ATOM 2 P G A 178 72.765 107.520 23.587 1.00 42.19 P
ATOM 3 OP1 G A 178 73.515 106.322 24.062 1.00 41.02 O
ATOM 4 OP2 G A 178 73.511 108.774 23.309 1.00 43.67 O
ATOM 5 O5' G A 178 71.931 107.124 22.288 1.00 41.50 O
ATOM 6 C5' G A 178 71.152 105.916 22.249 1.00 40.46 C
ATOM 7 C4' G A 178 70.241 105.918 21.047 1.00 40.87 C
ATOM 8 O4' G A 178 69.247 106.959 21.182 1.00 41.76 O
ATOM 9 C3' G A 178 70.907 106.195 19.711 1.00 41.50 C
ATOM 10 O3' G A 178 71.444 104.987 19.192 1.00 42.84 O
ATOM 11 C2' G A 178 69.746 106.702 18.872 1.00 42.27 C
ATOM 12 O2' G A 178 68.928 105.648 18.414 1.00 44.68 O
ATOM 13 C1' G A 178 68.946 107.496 19.907 1.00 41.78 C
ATOM 14 N9 G A 178 69.213 108.930 19.941 1.00 41.37 N
ATOM 15 C8 G A 178 70.242 109.571 20.590 1.00 40.54 C
ATOM 16 N7 G A 178 70.184 110.867 20.483 1.00 40.29 N
ATOM 17 C5 G A 178 69.058 111.097 19.706 1.00 41.64 C
ATOM 18 C6 G A 178 68.481 112.314 19.256 1.00 43.30 C
ATOM 19 O6 G A 178 68.857 113.470 19.468 1.00 46.14 O
ATOM 20 N1 G A 178 67.347 112.089 18.485 1.00 42.66 N
ATOM 21 C2 G A 178 66.830 110.859 18.186 1.00 42.32 C
ATOM 22 N2 G A 178 65.722 110.857 17.429 1.00 41.63 N
ATOM 23 N3 G A 178 67.356 109.716 18.601 1.00 41.60 N
ATOM 24 C4 G A 178 68.458 109.910 19.352 1.00 40.82 C
ATOM 25 P A A 179 72.843 105.003 18.416 1.00 44.46 P
ATOM 26 OP1 A A 179 73.333 103.599 18.365 1.00 42.81 O
ATOM 27 OP2 A A 179 73.706 106.048 19.019 1.00 46.26 O
ATOM 28 O5' A A 179 72.413 105.490 16.960 1.00 45.27 O
TER

ATOM 1 O3' U B 422 66.817 115.777 15.997 1.00 41.06 O
ATOM 2 P A B 423 65.819 115.518 17.225 1.00 42.03 P
ATOM 3 OP1 A B 423 66.015 116.611 18.209 1.00 44.02 O
ATOM 4 OP2 A B 423 65.983 114.108 17.654 1.00 41.52 O
ATOM 5 O5' A B 423 64.367 115.698 16.594 1.00 42.34 O
ATOM 6 C5' A B 423 63.973 116.933 15.961 1.00 42.92 C
ATOM 7 C4' A B 423 62.679 116.735 15.207 1.00 43.89 C
ATOM 8 O4' A B 423 62.861 115.672 14.240 1.00 44.30 O
ATOM 9 C3' A B 423 61.513 116.289 16.074 1.00 44.64 C
ATOM 10 O3' A B 423 60.826 117.433 16.570 1.00 46.19 O
ATOM 11 C2' A B 423 60.656 115.476 15.110 1.00 44.46 C
ATOM 12 O2' A B 423 59.830 116.281 14.299 1.00 45.31 O
ATOM 13 C1' A B 423 61.722 114.830 14.226 1.00 43.21 C
ATOM 14 N9 A B 423 62.153 113.495 14.636 1.00 42.24 N
ATOM 15 C8 A B 423 63.369 113.138 15.172 1.00 41.36 C
ATOM 16 N7 A B 423 63.498 111.852 15.378 1.00 42.19 N
ATOM 17 C5 A B 423 62.283 111.326 14.965 1.00 41.58 C
ATOM 18 C6 A B 423 61.798 110.012 14.906 1.00 41.60 C
ATOM 19 N6 A B 423 62.511 108.946 15.268 1.00 42.33 N
ATOM 20 N1 A B 423 60.544 109.826 14.446 1.00 42.12 N
ATOM 21 C2 A B 423 59.836 110.899 14.064 1.00 42.92 C
ATOM 22 N3 A B 423 60.187 112.183 14.061 1.00 42.10 N
ATOM 23 C4 A B 423 61.437 112.330 14.526 1.00 41.50 C
ATOM 24 P A B 424 59.957 117.329 17.912 1.00 46.84 P
ATOM 25 OP1 A B 424 59.083 118.528 17.964 1.00 48.20 O
ATOM 26 OP2 A B 424 60.881 117.047 19.037 1.00 47.61 O
ATOM 27 O5' A B 424 59.037 116.052 17.669 1.00 46.65 O
TER

Atoms:
OP1: (73.515,106.322,24.062)
OP2: (73.511,108.774,23.309)
C3': (70.907,106.195,19.711)
C1': (68.946,107.496,19.907)
C5': (71.152,105.916,22.249)
O6: (68.857,113.470,19.468)
O4': (69.247,106.959,21.182)
C8: (70.242,109.571,20.590)
C2: (66.830,110.859,18.186)
C6: (68.481,112.314,19.256)
C5: (69.058,111.097,19.706)
C4: (68.458,109.910,19.352)
P: (72.765,107.520,23.587)
C4': (70.241,105.918,21.047)
C2': (69.746,106.702,18.872)
O2': (68.928,105.648,18.414)
N1: (67.347,112.089,18.485)
N2: (65.722,110.857,17.429)
N3: (67.356,109.716,18.601)
N7: (70.184,110.867,20.483)
N9: (69.213,108.930,19.941)
O5': (71.931,107.124,22.288)
O3': (71.444,104.987,19.192)
OP1: (66.015,116.611,18.209)
OP2: (65.983,114.108,17.654)
C3': (61.513,116.289,16.074)
C1': (61.722,114.830,14.226)
C5': (63.973,116.933,15.961)
O4': (62.861,115.672,14.240)
C8: (63.369,113.138,15.172)
O2': (59.830,116.281,14.299)
C6: (61.798,110.012,14.906)
C5: (62.283,111.326,14.965)
C4: (61.437,112.330,14.526)
P: (65.819,115.518,17.225)
C4': (62.679,116.735,15.207)
C2': (60.656,115.476,15.110)
C2: (59.836,110.899,14.064)
N1: (60.544,109.826,14.446)
N3: (60.187,112.183,14.061)
N6: (62.511,108.946,15.268)
N7: (63.498,111.852,15.378)
N9: (62.153,113.495,14.636)
O5': (64.367,115.698,16.594)
O3': (60.826,117.433,16.570)
Image (generated by PyMOL):
PyMOL image
show in jmol