ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:0444:0448

Extra

PDB:
ATOM 1 O3' A A 443 42.075 126.898 58.052 1.00 25.37 O
ATOM 2 P G A 444 43.513 126.661 57.404 1.00 27.57 P
ATOM 3 OP1 G A 444 43.765 125.201 57.388 1.00 27.43 O
ATOM 4 OP2 G A 444 44.467 127.565 58.082 1.00 27.76 O
ATOM 5 O5' G A 444 43.341 127.161 55.904 1.00 27.31 O
ATOM 6 C5' G A 444 42.502 126.444 54.985 1.00 26.99 C
ATOM 7 C4' G A 444 42.292 127.244 53.727 1.00 26.71 C
ATOM 8 O4' G A 444 41.539 128.454 54.024 1.00 29.29 O
ATOM 9 C3' G A 444 43.545 127.774 53.064 1.00 25.64 C
ATOM 10 O3' G A 444 44.236 126.790 52.319 1.00 24.06 O
ATOM 11 C2' G A 444 42.978 128.880 52.196 1.00 27.45 C
ATOM 12 O2' G A 444 42.321 128.352 51.070 1.00 27.68 O
ATOM 13 C1' G A 444 41.943 129.493 53.141 1.00 29.97 C
ATOM 14 N9 G A 444 42.534 130.571 53.932 1.00 34.09 N
ATOM 15 C8 G A 444 43.014 130.487 55.219 1.00 34.98 C
ATOM 16 N7 G A 444 43.530 131.606 55.650 1.00 34.47 N
ATOM 17 C5 G A 444 43.376 132.486 54.590 1.00 36.06 C
ATOM 18 C6 G A 444 43.763 133.839 54.465 1.00 37.33 C
ATOM 19 O6 G A 444 44.338 134.553 55.291 1.00 37.75 O
ATOM 20 N1 G A 444 43.418 134.356 53.221 1.00 38.31 N
ATOM 21 C2 G A 444 42.781 133.662 52.225 1.00 36.40 C
ATOM 22 N2 G A 444 42.521 134.349 51.116 1.00 36.52 N
ATOM 23 N3 G A 444 42.423 132.393 52.320 1.00 35.69 N
ATOM 24 C4 G A 444 42.750 131.869 53.524 1.00 35.61 C
ATOM 25 P U A 445 45.833 126.669 52.472 1.00 25.38 P
ATOM 26 OP1 U A 445 46.327 125.568 51.620 1.00 23.49 O
ATOM 27 OP2 U A 445 46.110 126.639 53.923 1.00 25.55 O
ATOM 28 O5' U A 445 46.388 128.049 51.891 1.00 25.39 O
TER

ATOM 1 O3' A B 447 45.747 138.803 53.189 1.00 33.47 O
ATOM 2 P A B 448 44.300 138.123 53.065 1.00 33.70 P
ATOM 3 OP1 A B 448 43.631 138.238 54.379 1.00 32.53 O
ATOM 4 OP2 A B 448 44.424 136.793 52.417 1.00 34.13 O
ATOM 5 O5' A B 448 43.537 139.089 52.064 1.00 33.61 O
ATOM 6 C5' A B 448 43.957 139.203 50.699 1.00 33.18 C
ATOM 7 C4' A B 448 42.801 139.634 49.837 1.00 33.96 C
ATOM 8 O4' A B 448 41.815 138.571 49.762 1.00 34.84 O
ATOM 9 C3' A B 448 42.048 140.870 50.305 1.00 33.84 C
ATOM 10 O3' A B 448 41.599 141.552 49.149 1.00 34.49 O
ATOM 11 C2' A B 448 40.867 140.276 51.064 1.00 33.85 C
ATOM 12 O2' A B 448 39.739 141.119 51.089 1.00 33.52 O
ATOM 13 C1' A B 448 40.563 139.048 50.218 1.00 35.37 C
ATOM 14 N9 A B 448 39.912 137.962 50.943 1.00 38.00 N
ATOM 15 C8 A B 448 40.262 137.420 52.154 1.00 38.58 C
ATOM 16 N7 A B 448 39.521 136.404 52.509 1.00 40.24 N
ATOM 17 C5 A B 448 38.613 136.272 51.467 1.00 40.74 C
ATOM 18 C6 A B 448 37.571 135.360 51.230 1.00 40.55 C
ATOM 19 N6 A B 448 37.265 134.362 52.055 1.00 41.39 N
ATOM 20 N1 A B 448 36.853 135.506 50.098 1.00 40.28 N
ATOM 21 C2 A B 448 37.171 136.501 49.264 1.00 41.49 C
ATOM 22 N3 A B 448 38.133 137.416 49.371 1.00 41.60 N
ATOM 23 C4 A B 448 38.829 137.241 50.508 1.00 40.51 C
ATOM 24 P C B 449 42.455 142.776 48.576 1.00 35.06 P
ATOM 25 OP1 C B 449 41.687 143.350 47.435 1.00 34.16 O
ATOM 26 OP2 C B 449 43.847 142.308 48.365 1.00 32.93 O
ATOM 27 O5' C B 449 42.406 143.817 49.770 1.00 31.14 O
TER

Atoms:
OP1: (43.765,125.201,57.388)
OP2: (44.467,127.565,58.082)
C3': (43.545,127.774,53.064)
C1': (41.943,129.493,53.141)
C5': (42.502,126.444,54.985)
O6: (44.338,134.553,55.291)
O4': (41.539,128.454,54.024)
C8: (43.014,130.487,55.219)
C2: (42.781,133.662,52.225)
C6: (43.763,133.839,54.465)
C5: (43.376,132.486,54.590)
C4: (42.750,131.869,53.524)
P: (43.513,126.661,57.404)
C4': (42.292,127.244,53.727)
C2': (42.978,128.880,52.196)
O2': (42.321,128.352,51.070)
N1: (43.418,134.356,53.221)
N2: (42.521,134.349,51.116)
N3: (42.423,132.393,52.320)
N7: (43.530,131.606,55.650)
N9: (42.534,130.571,53.932)
O5': (43.341,127.161,55.904)
O3': (44.236,126.790,52.319)
OP1: (43.631,138.238,54.379)
OP2: (44.424,136.793,52.417)
C3': (42.048,140.870,50.305)
C1': (40.563,139.048,50.218)
C5': (43.957,139.203,50.699)
O4': (41.815,138.571,49.762)
C8: (40.262,137.420,52.154)
O2': (39.739,141.119,51.089)
C6: (37.571,135.360,51.230)
C5: (38.613,136.272,51.467)
C4: (38.829,137.241,50.508)
P: (44.300,138.123,53.065)
C4': (42.801,139.634,49.837)
C2': (40.867,140.276,51.064)
C2: (37.171,136.501,49.264)
N1: (36.853,135.506,50.098)
N3: (38.133,137.416,49.371)
N6: (37.265,134.362,52.055)
N7: (39.521,136.404,52.509)
N9: (39.912,137.962,50.943)
O5': (43.537,139.089,52.064)
O3': (41.599,141.552,49.149)
Image (generated by PyMOL):
PyMOL image
show in jmol