Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A408:A429
Extra
PDB:
ATOM 1 O3' U A 407 -113.007 40.407 -85.527 1.00 62.09 O
ATOM 2 P G A 408 -113.949 40.660 -84.257 1.00 37.29 P
ATOM 3 OP1 G A 408 -114.718 41.882 -84.516 1.00 37.29 O
ATOM 4 OP2 G A 408 -113.093 40.608 -83.062 1.00 37.29 O
ATOM 5 O5' G A 408 -114.904 39.405 -84.286 1.00 37.29 O
ATOM 6 C5' G A 408 -116.237 39.526 -83.886 1.00 37.29 C
ATOM 7 C4' G A 408 -116.892 38.190 -83.823 1.00 37.29 C
ATOM 8 O4' G A 408 -116.012 37.194 -84.416 1.00 37.29 O
ATOM 9 C3' G A 408 -117.139 37.658 -82.429 1.00 37.29 C
ATOM 10 O3' G A 408 -118.278 38.203 -81.810 1.00 37.29 O
ATOM 11 C2' G A 408 -117.211 36.162 -82.672 1.00 37.29 C
ATOM 12 O2' G A 408 -118.418 35.806 -83.343 1.00 37.29 O
ATOM 13 C1' G A 408 -116.045 36.012 -83.636 1.00 37.29 C
ATOM 14 N9 G A 408 -114.759 35.919 -82.909 1.00 38.55 N
ATOM 15 C8 G A 408 -113.894 36.970 -82.624 1.00 38.55 C
ATOM 16 N7 G A 408 -112.814 36.622 -81.958 1.00 38.55 N
ATOM 17 C5 G A 408 -112.977 35.246 -81.780 1.00 38.55 C
ATOM 18 C6 G A 408 -112.146 34.293 -81.132 1.00 38.55 C
ATOM 19 O6 G A 408 -111.060 34.468 -80.574 1.00 38.55 O
ATOM 20 N1 G A 408 -112.685 33.018 -81.179 1.00 38.55 N
ATOM 21 C2 G A 408 -113.871 32.675 -81.770 1.00 38.55 C
ATOM 22 N2 G A 408 -114.212 31.375 -81.707 1.00 38.55 N
ATOM 23 N3 G A 408 -114.663 33.547 -82.374 1.00 38.55 N
ATOM 24 C4 G A 408 -114.167 34.804 -82.349 1.00 38.55 C
ATOM 25 P A A 409 -118.563 39.775 -81.875 1.00 62.47 P
ATOM 26 OP1 A A 409 -118.316 40.207 -83.259 1.00 62.47 O
ATOM 27 OP2 A A 409 -117.810 40.422 -80.780 1.00 62.47 O
ATOM 28 O5' A A 409 -120.108 39.818 -81.569 1.00 62.47 O
TER
ATOM 1 O3' A B 428 -110.639 29.927 -77.647 1.00 36.97 O
ATOM 2 P A B 429 -111.017 29.830 -79.190 1.00 43.97 P
ATOM 3 OP1 A B 429 -109.857 29.214 -79.887 1.00 43.97 O
ATOM 4 OP2 A B 429 -111.447 31.174 -79.593 1.00 43.97 O
ATOM 5 O5' A B 429 -112.264 28.829 -79.191 1.00 43.97 O
ATOM 6 C5' A B 429 -112.099 27.462 -78.843 1.00 43.97 C
ATOM 7 C4' A B 429 -113.416 26.790 -78.508 1.00 43.97 C
ATOM 8 O4' A B 429 -114.205 27.638 -77.647 1.00 43.97 O
ATOM 9 C3' A B 429 -114.348 26.489 -79.674 1.00 43.97 C
ATOM 10 O3' A B 429 -113.977 25.326 -80.392 1.00 43.97 O
ATOM 11 C2' A B 429 -115.708 26.374 -78.993 1.00 43.97 C
ATOM 12 O2' A B 429 -115.892 25.095 -78.419 1.00 43.97 O
ATOM 13 C1' A B 429 -115.581 27.394 -77.867 1.00 43.97 C
ATOM 14 N9 A B 429 -116.253 28.664 -78.204 1.00 44.67 N
ATOM 15 C8 A B 429 -115.786 29.971 -78.254 1.00 44.67 C
ATOM 16 N7 A B 429 -116.712 30.833 -78.603 1.00 44.67 N
ATOM 17 C5 A B 429 -117.850 30.032 -78.792 1.00 44.67 C
ATOM 18 C6 A B 429 -119.178 30.318 -79.174 1.00 44.67 C
ATOM 19 N6 A B 429 -119.592 31.574 -79.442 1.00 44.67 N
ATOM 20 N1 A B 429 -120.051 29.260 -79.264 1.00 44.67 N
ATOM 21 C2 A B 429 -119.643 28.015 -78.994 1.00 44.67 C
ATOM 22 N3 A B 429 -118.434 27.628 -78.623 1.00 44.67 N
ATOM 23 C4 A B 429 -117.587 28.691 -78.546 1.00 44.67 C
ATOM 24 P A B 430 -113.437 25.441 -81.899 1.00 71.03 P
ATOM 25 OP1 A B 430 -112.438 24.364 -82.093 1.00 71.03 O
ATOM 26 OP2 A B 430 -113.017 26.853 -82.114 1.00 71.03 O
ATOM 27 O5' A B 430 -114.738 25.122 -82.741 1.00 71.03 O
TER
ATOM 2 P G A 408 -113.949 40.660 -84.257 1.00 37.29 P
ATOM 3 OP1 G A 408 -114.718 41.882 -84.516 1.00 37.29 O
ATOM 4 OP2 G A 408 -113.093 40.608 -83.062 1.00 37.29 O
ATOM 5 O5' G A 408 -114.904 39.405 -84.286 1.00 37.29 O
ATOM 6 C5' G A 408 -116.237 39.526 -83.886 1.00 37.29 C
ATOM 7 C4' G A 408 -116.892 38.190 -83.823 1.00 37.29 C
ATOM 8 O4' G A 408 -116.012 37.194 -84.416 1.00 37.29 O
ATOM 9 C3' G A 408 -117.139 37.658 -82.429 1.00 37.29 C
ATOM 10 O3' G A 408 -118.278 38.203 -81.810 1.00 37.29 O
ATOM 11 C2' G A 408 -117.211 36.162 -82.672 1.00 37.29 C
ATOM 12 O2' G A 408 -118.418 35.806 -83.343 1.00 37.29 O
ATOM 13 C1' G A 408 -116.045 36.012 -83.636 1.00 37.29 C
ATOM 14 N9 G A 408 -114.759 35.919 -82.909 1.00 38.55 N
ATOM 15 C8 G A 408 -113.894 36.970 -82.624 1.00 38.55 C
ATOM 16 N7 G A 408 -112.814 36.622 -81.958 1.00 38.55 N
ATOM 17 C5 G A 408 -112.977 35.246 -81.780 1.00 38.55 C
ATOM 18 C6 G A 408 -112.146 34.293 -81.132 1.00 38.55 C
ATOM 19 O6 G A 408 -111.060 34.468 -80.574 1.00 38.55 O
ATOM 20 N1 G A 408 -112.685 33.018 -81.179 1.00 38.55 N
ATOM 21 C2 G A 408 -113.871 32.675 -81.770 1.00 38.55 C
ATOM 22 N2 G A 408 -114.212 31.375 -81.707 1.00 38.55 N
ATOM 23 N3 G A 408 -114.663 33.547 -82.374 1.00 38.55 N
ATOM 24 C4 G A 408 -114.167 34.804 -82.349 1.00 38.55 C
ATOM 25 P A A 409 -118.563 39.775 -81.875 1.00 62.47 P
ATOM 26 OP1 A A 409 -118.316 40.207 -83.259 1.00 62.47 O
ATOM 27 OP2 A A 409 -117.810 40.422 -80.780 1.00 62.47 O
ATOM 28 O5' A A 409 -120.108 39.818 -81.569 1.00 62.47 O
TER
ATOM 1 O3' A B 428 -110.639 29.927 -77.647 1.00 36.97 O
ATOM 2 P A B 429 -111.017 29.830 -79.190 1.00 43.97 P
ATOM 3 OP1 A B 429 -109.857 29.214 -79.887 1.00 43.97 O
ATOM 4 OP2 A B 429 -111.447 31.174 -79.593 1.00 43.97 O
ATOM 5 O5' A B 429 -112.264 28.829 -79.191 1.00 43.97 O
ATOM 6 C5' A B 429 -112.099 27.462 -78.843 1.00 43.97 C
ATOM 7 C4' A B 429 -113.416 26.790 -78.508 1.00 43.97 C
ATOM 8 O4' A B 429 -114.205 27.638 -77.647 1.00 43.97 O
ATOM 9 C3' A B 429 -114.348 26.489 -79.674 1.00 43.97 C
ATOM 10 O3' A B 429 -113.977 25.326 -80.392 1.00 43.97 O
ATOM 11 C2' A B 429 -115.708 26.374 -78.993 1.00 43.97 C
ATOM 12 O2' A B 429 -115.892 25.095 -78.419 1.00 43.97 O
ATOM 13 C1' A B 429 -115.581 27.394 -77.867 1.00 43.97 C
ATOM 14 N9 A B 429 -116.253 28.664 -78.204 1.00 44.67 N
ATOM 15 C8 A B 429 -115.786 29.971 -78.254 1.00 44.67 C
ATOM 16 N7 A B 429 -116.712 30.833 -78.603 1.00 44.67 N
ATOM 17 C5 A B 429 -117.850 30.032 -78.792 1.00 44.67 C
ATOM 18 C6 A B 429 -119.178 30.318 -79.174 1.00 44.67 C
ATOM 19 N6 A B 429 -119.592 31.574 -79.442 1.00 44.67 N
ATOM 20 N1 A B 429 -120.051 29.260 -79.264 1.00 44.67 N
ATOM 21 C2 A B 429 -119.643 28.015 -78.994 1.00 44.67 C
ATOM 22 N3 A B 429 -118.434 27.628 -78.623 1.00 44.67 N
ATOM 23 C4 A B 429 -117.587 28.691 -78.546 1.00 44.67 C
ATOM 24 P A B 430 -113.437 25.441 -81.899 1.00 71.03 P
ATOM 25 OP1 A B 430 -112.438 24.364 -82.093 1.00 71.03 O
ATOM 26 OP2 A B 430 -113.017 26.853 -82.114 1.00 71.03 O
ATOM 27 O5' A B 430 -114.738 25.122 -82.741 1.00 71.03 O
TER
Atoms:
OP1: (-114.718,41.882,-84.516)
OP2: (-113.093,40.608,-83.062)
C3': (-117.139,37.658,-82.429)
C1': (-116.045,36.012,-83.636)
C5': (-116.237,39.526,-83.886)
O6: (-111.060,34.468,-80.574)
O4': (-116.012,37.194,-84.416)
C8: (-113.894,36.970,-82.624)
C2: (-113.871,32.675,-81.770)
C6: (-112.146,34.293,-81.132)
C5: (-112.977,35.246,-81.780)
C4: (-114.167,34.804,-82.349)
P: (-113.949,40.660,-84.257)
C4': (-116.892,38.190,-83.823)
C2': (-117.211,36.162,-82.672)
O2': (-118.418,35.806,-83.343)
N1: (-112.685,33.018,-81.179)
N2: (-114.212,31.375,-81.707)
N3: (-114.663,33.547,-82.374)
N7: (-112.814,36.622,-81.958)
N9: (-114.759,35.919,-82.909)
O5': (-114.904,39.405,-84.286)
O3': (-118.278,38.203,-81.810)
OP2: (-113.093,40.608,-83.062)
C3': (-117.139,37.658,-82.429)
C1': (-116.045,36.012,-83.636)
C5': (-116.237,39.526,-83.886)
O6: (-111.060,34.468,-80.574)
O4': (-116.012,37.194,-84.416)
C8: (-113.894,36.970,-82.624)
C2: (-113.871,32.675,-81.770)
C6: (-112.146,34.293,-81.132)
C5: (-112.977,35.246,-81.780)
C4: (-114.167,34.804,-82.349)
P: (-113.949,40.660,-84.257)
C4': (-116.892,38.190,-83.823)
C2': (-117.211,36.162,-82.672)
O2': (-118.418,35.806,-83.343)
N1: (-112.685,33.018,-81.179)
N2: (-114.212,31.375,-81.707)
N3: (-114.663,33.547,-82.374)
N7: (-112.814,36.622,-81.958)
N9: (-114.759,35.919,-82.909)
O5': (-114.904,39.405,-84.286)
O3': (-118.278,38.203,-81.810)
OP1: (-109.857,29.214,-79.887)
OP2: (-111.447,31.174,-79.593)
C3': (-114.348,26.489,-79.674)
C1': (-115.581,27.394,-77.867)
C5': (-112.099,27.462,-78.843)
O4': (-114.205,27.638,-77.647)
C8: (-115.786,29.971,-78.254)
O2': (-115.892,25.095,-78.419)
C6: (-119.178,30.318,-79.174)
C5: (-117.850,30.032,-78.792)
C4: (-117.587,28.691,-78.546)
P: (-111.017,29.830,-79.190)
C4': (-113.416,26.790,-78.508)
C2': (-115.708,26.374,-78.993)
C2: (-119.643,28.015,-78.994)
N1: (-120.051,29.260,-79.264)
N3: (-118.434,27.628,-78.623)
N6: (-119.592,31.574,-79.442)
N7: (-116.712,30.833,-78.603)
N9: (-116.253,28.664,-78.204)
O5': (-112.264,28.829,-79.191)
O3': (-113.977,25.326,-80.392)
OP2: (-111.447,31.174,-79.593)
C3': (-114.348,26.489,-79.674)
C1': (-115.581,27.394,-77.867)
C5': (-112.099,27.462,-78.843)
O4': (-114.205,27.638,-77.647)
C8: (-115.786,29.971,-78.254)
O2': (-115.892,25.095,-78.419)
C6: (-119.178,30.318,-79.174)
C5: (-117.850,30.032,-78.792)
C4: (-117.587,28.691,-78.546)
P: (-111.017,29.830,-79.190)
C4': (-113.416,26.790,-78.508)
C2': (-115.708,26.374,-78.993)
C2: (-119.643,28.015,-78.994)
N1: (-120.051,29.260,-79.264)
N3: (-118.434,27.628,-78.623)
N6: (-119.592,31.574,-79.442)
N7: (-116.712,30.833,-78.603)
N9: (-116.253,28.664,-78.204)
O5': (-112.264,28.829,-79.191)
O3': (-113.977,25.326,-80.392)
Image (generated by PyMOL):