ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0444:0448

Extra

PDB:
ATOM 1 O3' A A 443 42.266 127.255 58.302 1.00 36.01 O
ATOM 2 P G A 444 43.698 127.055 57.640 1.00 37.60 P
ATOM 3 OP1 G A 444 43.963 125.591 57.630 1.00 39.00 O
ATOM 4 OP2 G A 444 44.634 127.965 58.332 1.00 38.13 O
ATOM 5 O5' G A 444 43.507 127.560 56.142 1.00 36.34 O
ATOM 6 C5' G A 444 42.668 126.830 55.228 1.00 37.33 C
ATOM 7 C4' G A 444 42.460 127.609 53.954 1.00 35.31 C
ATOM 8 O4' G A 444 41.705 128.820 54.231 1.00 38.38 O
ATOM 9 C3' G A 444 43.720 128.122 53.298 1.00 34.58 C
ATOM 10 O3' G A 444 44.390 127.120 52.558 1.00 33.68 O
ATOM 11 C2' G A 444 43.180 129.242 52.430 1.00 35.60 C
ATOM 12 O2' G A 444 42.555 128.735 51.280 1.00 36.63 O
ATOM 13 C1' G A 444 42.131 129.858 53.357 1.00 37.88 C
ATOM 14 N9 G A 444 42.696 130.935 54.169 1.00 42.22 N
ATOM 15 C8 G A 444 43.160 130.837 55.462 1.00 42.17 C
ATOM 16 N7 G A 444 43.663 131.951 55.915 1.00 40.30 N
ATOM 17 C5 G A 444 43.517 132.845 54.867 1.00 42.23 C
ATOM 18 C6 G A 444 43.895 134.194 54.774 1.00 43.84 C
ATOM 19 O6 G A 444 44.457 134.890 55.622 1.00 45.97 O
ATOM 20 N1 G A 444 43.561 134.738 53.536 1.00 44.91 N
ATOM 21 C2 G A 444 42.933 134.064 52.518 1.00 43.62 C
ATOM 22 N2 G A 444 42.680 134.779 51.415 1.00 43.00 N
ATOM 23 N3 G A 444 42.580 132.787 52.587 1.00 42.84 N
ATOM 24 C4 G A 444 42.904 132.242 53.784 1.00 43.12 C
ATOM 25 P U A 445 45.988 126.980 52.690 1.00 33.81 P
ATOM 26 OP1 U A 445 46.456 125.890 51.794 1.00 31.68 O
ATOM 27 OP2 U A 445 46.260 126.899 54.141 1.00 33.31 O
ATOM 28 O5' U A 445 46.548 128.369 52.140 1.00 32.47 O
TER

ATOM 1 O3' A B 447 45.968 139.162 53.296 1.00 40.13 O
ATOM 2 P A B 448 44.521 138.483 53.246 1.00 43.16 P
ATOM 3 OP1 A B 448 43.898 138.686 54.567 1.00 43.27 O
ATOM 4 OP2 A B 448 44.630 137.110 52.687 1.00 41.84 O
ATOM 5 O5' A B 448 43.714 139.398 52.224 1.00 42.92 O
ATOM 6 C5' A B 448 44.065 139.441 50.828 1.00 42.24 C
ATOM 7 C4' A B 448 42.891 139.932 50.014 1.00 43.35 C
ATOM 8 O4' A B 448 41.865 138.908 49.955 1.00 42.64 O
ATOM 9 C3' A B 448 42.198 141.189 50.529 1.00 43.57 C
ATOM 10 O3' A B 448 41.713 141.921 49.415 1.00 44.45 O
ATOM 11 C2' A B 448 41.026 140.618 51.318 1.00 43.10 C
ATOM 12 O2' A B 448 39.938 141.507 51.435 1.00 42.65 O
ATOM 13 C1' A B 448 40.645 139.425 50.450 1.00 43.07 C
ATOM 14 N9 A B 448 39.968 138.349 51.162 1.00 44.83 N
ATOM 15 C8 A B 448 40.235 137.860 52.412 1.00 46.71 C
ATOM 16 N7 A B 448 39.490 136.841 52.748 1.00 48.91 N
ATOM 17 C5 A B 448 38.669 136.652 51.647 1.00 48.60 C
ATOM 18 C6 A B 448 37.664 135.710 51.366 1.00 49.67 C
ATOM 19 N6 A B 448 37.298 134.742 52.207 1.00 50.19 N
ATOM 20 N1 A B 448 37.042 135.797 50.176 1.00 49.56 N
ATOM 21 C2 A B 448 37.408 136.767 49.334 1.00 49.30 C
ATOM 22 N3 A B 448 38.335 137.706 49.482 1.00 48.98 N
ATOM 23 C4 A B 448 38.940 137.588 50.673 1.00 47.08 C
ATOM 24 P C B 449 42.546 143.172 48.868 1.00 46.49 P
ATOM 25 OP1 C B 449 41.758 143.731 47.739 1.00 48.14 O
ATOM 26 OP2 C B 449 43.953 142.749 48.646 1.00 45.40 O
ATOM 27 O5' C B 449 42.477 144.207 50.070 1.00 46.71 O
TER

Atoms:
OP1: (43.963,125.591,57.630)
OP2: (44.634,127.965,58.332)
C3': (43.720,128.122,53.298)
C1': (42.131,129.858,53.357)
C5': (42.668,126.830,55.228)
O6: (44.457,134.890,55.622)
O4': (41.705,128.820,54.231)
C8: (43.160,130.837,55.462)
C2: (42.933,134.064,52.518)
C6: (43.895,134.194,54.774)
C5: (43.517,132.845,54.867)
C4: (42.904,132.242,53.784)
P: (43.698,127.055,57.640)
C4': (42.460,127.609,53.954)
C2': (43.180,129.242,52.430)
O2': (42.555,128.735,51.280)
N1: (43.561,134.738,53.536)
N2: (42.680,134.779,51.415)
N3: (42.580,132.787,52.587)
N7: (43.663,131.951,55.915)
N9: (42.696,130.935,54.169)
O5': (43.507,127.560,56.142)
O3': (44.390,127.120,52.558)
OP1: (43.898,138.686,54.567)
OP2: (44.630,137.110,52.687)
C3': (42.198,141.189,50.529)
C1': (40.645,139.425,50.450)
C5': (44.065,139.441,50.828)
O4': (41.865,138.908,49.955)
C8: (40.235,137.860,52.412)
O2': (39.938,141.507,51.435)
C6: (37.664,135.710,51.366)
C5: (38.669,136.652,51.647)
C4: (38.940,137.588,50.673)
P: (44.521,138.483,53.246)
C4': (42.891,139.932,50.014)
C2': (41.026,140.618,51.318)
C2: (37.408,136.767,49.334)
N1: (37.042,135.797,50.176)
N3: (38.335,137.706,49.482)
N6: (37.298,134.742,52.207)
N7: (39.490,136.841,52.748)
N9: (39.968,138.349,51.162)
O5': (43.714,139.398,52.224)
O3': (41.713,141.921,49.415)
Image (generated by PyMOL):
PyMOL image
show in jmol