Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2OTL:0580:0553
Extra
PDB:
ATOM 1 O3' A A 579 -5.967 103.794 106.608 1.00 57.49 O
ATOM 2 P G A 580 -5.967 104.236 105.065 1.00 58.55 P
ATOM 3 OP1 G A 580 -5.663 105.689 105.029 1.00 57.01 O
ATOM 4 OP2 G A 580 -7.190 103.723 104.402 1.00 59.57 O
ATOM 5 O5' G A 580 -4.745 103.435 104.435 1.00 59.23 O
ATOM 6 C5' G A 580 -3.382 103.756 104.779 1.00 55.02 C
ATOM 7 C4' G A 580 -2.449 102.769 104.134 1.00 53.04 C
ATOM 8 O4' G A 580 -2.739 101.443 104.640 1.00 52.36 O
ATOM 9 C3' G A 580 -2.600 102.627 102.630 1.00 52.28 C
ATOM 10 O3' G A 580 -1.838 103.600 101.947 1.00 52.70 O
ATOM 11 C2' G A 580 -2.024 101.245 102.382 1.00 53.06 C
ATOM 12 O2' G A 580 -0.615 101.248 102.340 1.00 55.19 O
ATOM 13 C1' G A 580 -2.515 100.488 103.618 1.00 53.22 C
ATOM 14 N9 G A 580 -3.771 99.807 103.344 1.00 53.76 N
ATOM 15 C8 G A 580 -5.038 100.270 103.592 1.00 54.57 C
ATOM 16 N7 G A 580 -5.968 99.460 103.171 1.00 55.68 N
ATOM 17 C5 G A 580 -5.271 98.393 102.626 1.00 55.13 C
ATOM 18 C6 G A 580 -5.741 97.213 102.006 1.00 55.91 C
ATOM 19 O6 G A 580 -6.908 96.858 101.804 1.00 59.74 O
ATOM 20 N1 G A 580 -4.691 96.401 101.597 1.00 56.82 N
ATOM 21 C2 G A 580 -3.360 96.687 101.762 1.00 56.73 C
ATOM 22 N2 G A 580 -2.500 95.773 101.300 1.00 56.60 N
ATOM 23 N3 G A 580 -2.909 97.786 102.338 1.00 55.50 N
ATOM 24 C4 G A 580 -3.913 98.588 102.742 1.00 54.78 C
ATOM 25 P A A 581 -2.553 104.902 101.358 1.00 54.95 P
ATOM 26 OP1 A A 581 -2.576 105.918 102.445 1.00 53.83 O
ATOM 27 OP2 A A 581 -3.817 104.492 100.710 1.00 54.47 O
ATOM 28 O5' A A 581 -1.546 105.396 100.228 1.00 55.67 O
TER
ATOM 1 O3' G B 552 -5.481 94.885 97.107 1.00 55.24 O
ATOM 2 P A B 553 -4.953 93.982 98.325 1.00 54.97 P
ATOM 3 OP1 A B 553 -5.522 92.626 98.151 1.00 53.12 O
ATOM 4 OP2 A B 553 -5.132 94.700 99.612 1.00 53.75 O
ATOM 5 O5' A B 553 -3.399 93.856 98.031 1.00 54.31 O
ATOM 6 C5' A B 553 -2.941 93.149 96.874 1.00 53.33 C
ATOM 7 C4' A B 553 -1.446 93.256 96.755 1.00 53.32 C
ATOM 8 O4' A B 553 -1.061 94.604 96.385 1.00 52.70 O
ATOM 9 C3' A B 553 -0.663 93.006 98.028 1.00 51.84 C
ATOM 10 O3' A B 553 -0.539 91.621 98.286 1.00 50.81 O
ATOM 11 C2' A B 553 0.674 93.639 97.681 1.00 51.39 C
ATOM 12 O2' A B 553 1.383 92.806 96.783 1.00 48.82 O
ATOM 13 C1' A B 553 0.218 94.888 96.926 1.00 51.27 C
ATOM 14 N9 A B 553 0.111 96.109 97.725 1.00 51.75 N
ATOM 15 C8 A B 553 -1.027 96.667 98.240 1.00 52.60 C
ATOM 16 N7 A B 553 -0.826 97.816 98.844 1.00 52.77 N
ATOM 17 C5 A B 553 0.540 98.016 98.737 1.00 51.85 C
ATOM 18 C6 A B 553 1.382 99.058 99.166 1.00 52.09 C
ATOM 19 N6 A B 553 0.958 100.141 99.817 1.00 52.24 N
ATOM 20 N1 A B 553 2.697 98.949 98.902 1.00 51.96 N
ATOM 21 C2 A B 553 3.129 97.865 98.256 1.00 52.91 C
ATOM 22 N3 A B 553 2.440 96.822 97.799 1.00 53.24 N
ATOM 23 C4 A B 553 1.134 96.962 98.071 1.00 52.53 C
ATOM 24 P A B 554 -0.639 91.086 99.793 1.00 51.33 P
ATOM 25 OP1 A B 554 -0.802 89.603 99.734 1.00 48.12 O
ATOM 26 OP2 A B 554 -1.635 91.922 100.509 1.00 48.77 O
ATOM 27 O5' A B 554 0.788 91.399 100.427 1.00 51.49 O
TER
ATOM 2 P G A 580 -5.967 104.236 105.065 1.00 58.55 P
ATOM 3 OP1 G A 580 -5.663 105.689 105.029 1.00 57.01 O
ATOM 4 OP2 G A 580 -7.190 103.723 104.402 1.00 59.57 O
ATOM 5 O5' G A 580 -4.745 103.435 104.435 1.00 59.23 O
ATOM 6 C5' G A 580 -3.382 103.756 104.779 1.00 55.02 C
ATOM 7 C4' G A 580 -2.449 102.769 104.134 1.00 53.04 C
ATOM 8 O4' G A 580 -2.739 101.443 104.640 1.00 52.36 O
ATOM 9 C3' G A 580 -2.600 102.627 102.630 1.00 52.28 C
ATOM 10 O3' G A 580 -1.838 103.600 101.947 1.00 52.70 O
ATOM 11 C2' G A 580 -2.024 101.245 102.382 1.00 53.06 C
ATOM 12 O2' G A 580 -0.615 101.248 102.340 1.00 55.19 O
ATOM 13 C1' G A 580 -2.515 100.488 103.618 1.00 53.22 C
ATOM 14 N9 G A 580 -3.771 99.807 103.344 1.00 53.76 N
ATOM 15 C8 G A 580 -5.038 100.270 103.592 1.00 54.57 C
ATOM 16 N7 G A 580 -5.968 99.460 103.171 1.00 55.68 N
ATOM 17 C5 G A 580 -5.271 98.393 102.626 1.00 55.13 C
ATOM 18 C6 G A 580 -5.741 97.213 102.006 1.00 55.91 C
ATOM 19 O6 G A 580 -6.908 96.858 101.804 1.00 59.74 O
ATOM 20 N1 G A 580 -4.691 96.401 101.597 1.00 56.82 N
ATOM 21 C2 G A 580 -3.360 96.687 101.762 1.00 56.73 C
ATOM 22 N2 G A 580 -2.500 95.773 101.300 1.00 56.60 N
ATOM 23 N3 G A 580 -2.909 97.786 102.338 1.00 55.50 N
ATOM 24 C4 G A 580 -3.913 98.588 102.742 1.00 54.78 C
ATOM 25 P A A 581 -2.553 104.902 101.358 1.00 54.95 P
ATOM 26 OP1 A A 581 -2.576 105.918 102.445 1.00 53.83 O
ATOM 27 OP2 A A 581 -3.817 104.492 100.710 1.00 54.47 O
ATOM 28 O5' A A 581 -1.546 105.396 100.228 1.00 55.67 O
TER
ATOM 1 O3' G B 552 -5.481 94.885 97.107 1.00 55.24 O
ATOM 2 P A B 553 -4.953 93.982 98.325 1.00 54.97 P
ATOM 3 OP1 A B 553 -5.522 92.626 98.151 1.00 53.12 O
ATOM 4 OP2 A B 553 -5.132 94.700 99.612 1.00 53.75 O
ATOM 5 O5' A B 553 -3.399 93.856 98.031 1.00 54.31 O
ATOM 6 C5' A B 553 -2.941 93.149 96.874 1.00 53.33 C
ATOM 7 C4' A B 553 -1.446 93.256 96.755 1.00 53.32 C
ATOM 8 O4' A B 553 -1.061 94.604 96.385 1.00 52.70 O
ATOM 9 C3' A B 553 -0.663 93.006 98.028 1.00 51.84 C
ATOM 10 O3' A B 553 -0.539 91.621 98.286 1.00 50.81 O
ATOM 11 C2' A B 553 0.674 93.639 97.681 1.00 51.39 C
ATOM 12 O2' A B 553 1.383 92.806 96.783 1.00 48.82 O
ATOM 13 C1' A B 553 0.218 94.888 96.926 1.00 51.27 C
ATOM 14 N9 A B 553 0.111 96.109 97.725 1.00 51.75 N
ATOM 15 C8 A B 553 -1.027 96.667 98.240 1.00 52.60 C
ATOM 16 N7 A B 553 -0.826 97.816 98.844 1.00 52.77 N
ATOM 17 C5 A B 553 0.540 98.016 98.737 1.00 51.85 C
ATOM 18 C6 A B 553 1.382 99.058 99.166 1.00 52.09 C
ATOM 19 N6 A B 553 0.958 100.141 99.817 1.00 52.24 N
ATOM 20 N1 A B 553 2.697 98.949 98.902 1.00 51.96 N
ATOM 21 C2 A B 553 3.129 97.865 98.256 1.00 52.91 C
ATOM 22 N3 A B 553 2.440 96.822 97.799 1.00 53.24 N
ATOM 23 C4 A B 553 1.134 96.962 98.071 1.00 52.53 C
ATOM 24 P A B 554 -0.639 91.086 99.793 1.00 51.33 P
ATOM 25 OP1 A B 554 -0.802 89.603 99.734 1.00 48.12 O
ATOM 26 OP2 A B 554 -1.635 91.922 100.509 1.00 48.77 O
ATOM 27 O5' A B 554 0.788 91.399 100.427 1.00 51.49 O
TER
Atoms:
OP1: (-5.663,105.689,105.029)
OP2: (-7.190,103.723,104.402)
C3': (-2.600,102.627,102.630)
C1': (-2.515,100.488,103.618)
C5': (-3.382,103.756,104.779)
O6: (-6.908,96.858,101.804)
O4': (-2.739,101.443,104.640)
C8: (-5.038,100.270,103.592)
C2: (-3.360,96.687,101.762)
C6: (-5.741,97.213,102.006)
C5: (-5.271,98.393,102.626)
C4: (-3.913,98.588,102.742)
P: (-5.967,104.236,105.065)
C4': (-2.449,102.769,104.134)
C2': (-2.024,101.245,102.382)
O2': (-0.615,101.248,102.340)
N1: (-4.691,96.401,101.597)
N2: (-2.500,95.773,101.300)
N3: (-2.909,97.786,102.338)
N7: (-5.968,99.460,103.171)
N9: (-3.771,99.807,103.344)
O5': (-4.745,103.435,104.435)
O3': (-1.838,103.600,101.947)
OP2: (-7.190,103.723,104.402)
C3': (-2.600,102.627,102.630)
C1': (-2.515,100.488,103.618)
C5': (-3.382,103.756,104.779)
O6: (-6.908,96.858,101.804)
O4': (-2.739,101.443,104.640)
C8: (-5.038,100.270,103.592)
C2: (-3.360,96.687,101.762)
C6: (-5.741,97.213,102.006)
C5: (-5.271,98.393,102.626)
C4: (-3.913,98.588,102.742)
P: (-5.967,104.236,105.065)
C4': (-2.449,102.769,104.134)
C2': (-2.024,101.245,102.382)
O2': (-0.615,101.248,102.340)
N1: (-4.691,96.401,101.597)
N2: (-2.500,95.773,101.300)
N3: (-2.909,97.786,102.338)
N7: (-5.968,99.460,103.171)
N9: (-3.771,99.807,103.344)
O5': (-4.745,103.435,104.435)
O3': (-1.838,103.600,101.947)
OP1: (-5.522,92.626,98.151)
OP2: (-5.132,94.700,99.612)
C3': (-0.663,93.006,98.028)
C1': (0.218,94.888,96.926)
C5': (-2.941,93.149,96.874)
O4': (-1.061,94.604,96.385)
C8: (-1.027,96.667,98.240)
O2': (1.383,92.806,96.783)
C6: (1.382,99.058,99.166)
C5: (0.540,98.016,98.737)
C4: (1.134,96.962,98.071)
P: (-4.953,93.982,98.325)
C4': (-1.446,93.256,96.755)
C2': (0.674,93.639,97.681)
C2: (3.129,97.865,98.256)
N1: (2.697,98.949,98.902)
N3: (2.440,96.822,97.799)
N6: (0.958,100.141,99.817)
N7: (-0.826,97.816,98.844)
N9: (0.111,96.109,97.725)
O5': (-3.399,93.856,98.031)
O3': (-0.539,91.621,98.286)
OP2: (-5.132,94.700,99.612)
C3': (-0.663,93.006,98.028)
C1': (0.218,94.888,96.926)
C5': (-2.941,93.149,96.874)
O4': (-1.061,94.604,96.385)
C8: (-1.027,96.667,98.240)
O2': (1.383,92.806,96.783)
C6: (1.382,99.058,99.166)
C5: (0.540,98.016,98.737)
C4: (1.134,96.962,98.071)
P: (-4.953,93.982,98.325)
C4': (-1.446,93.256,96.755)
C2': (0.674,93.639,97.681)
C2: (3.129,97.865,98.256)
N1: (2.697,98.949,98.902)
N3: (2.440,96.822,97.799)
N6: (0.958,100.141,99.817)
N7: (-0.826,97.816,98.844)
N9: (0.111,96.109,97.725)
O5': (-3.399,93.856,98.031)
O3': (-0.539,91.621,98.286)
Image (generated by PyMOL):