Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0668:0653
Extra
PDB:
ATOM 1 O3' G A 667 37.493 94.833 22.116 1.00 47.04 O
ATOM 2 P G A 668 38.300 93.658 22.862 1.00 47.96 P
ATOM 3 OP1 G A 668 38.772 92.672 21.861 1.00 47.83 O
ATOM 4 OP2 G A 668 37.456 93.206 23.994 1.00 46.60 O
ATOM 5 O5' G A 668 39.612 94.370 23.415 1.00 49.00 O
ATOM 6 C5' G A 668 40.694 94.738 22.530 1.00 48.44 C
ATOM 7 C4' G A 668 41.831 95.348 23.319 1.00 48.38 C
ATOM 8 O4' G A 668 41.355 96.540 23.995 1.00 48.45 O
ATOM 9 C3' G A 668 42.407 94.474 24.424 1.00 47.16 C
ATOM 10 O3' G A 668 43.444 93.645 23.907 1.00 47.11 O
ATOM 11 C2' G A 668 42.982 95.503 25.385 1.00 47.88 C
ATOM 12 O2' G A 668 44.238 95.977 24.947 1.00 46.56 O
ATOM 13 C1' G A 668 41.960 96.640 25.270 1.00 48.61 C
ATOM 14 N9 G A 668 40.900 96.635 26.276 1.00 49.62 N
ATOM 15 C8 G A 668 39.660 96.060 26.160 1.00 49.75 C
ATOM 16 N7 G A 668 38.906 96.246 27.208 1.00 51.19 N
ATOM 17 C5 G A 668 39.698 96.983 28.076 1.00 52.58 C
ATOM 18 C6 G A 668 39.415 97.497 29.377 1.00 53.16 C
ATOM 19 O6 G A 668 38.372 97.393 30.044 1.00 52.81 O
ATOM 20 N1 G A 668 40.501 98.194 29.894 1.00 52.81 N
ATOM 21 C2 G A 668 41.699 98.375 29.255 1.00 52.23 C
ATOM 22 N2 G A 668 42.612 99.078 29.922 1.00 52.86 N
ATOM 23 N3 G A 668 41.979 97.904 28.051 1.00 52.03 N
ATOM 24 C4 G A 668 40.938 97.225 27.521 1.00 51.73 C
ATOM 25 P G A 669 43.236 92.054 23.801 1.00 48.37 P
ATOM 26 OP1 G A 669 43.851 91.603 22.528 1.00 46.76 O
ATOM 27 OP2 G A 669 41.804 91.763 24.069 1.00 47.73 O
ATOM 28 O5' G A 669 44.123 91.449 24.984 1.00 47.84 O
TER
ATOM 1 O3' U B 652 40.393 97.694 34.304 1.00 45.64 O
ATOM 2 P A B 653 40.919 99.087 33.692 1.00 46.04 P
ATOM 3 OP1 A B 653 40.628 100.132 34.714 1.00 43.51 O
ATOM 4 OP2 A B 653 40.400 99.250 32.307 1.00 43.44 O
ATOM 5 O5' A B 653 42.497 98.879 33.610 1.00 42.99 O
ATOM 6 C5' A B 653 43.276 98.827 34.812 1.00 42.39 C
ATOM 7 C4' A B 653 44.743 98.975 34.507 1.00 41.98 C
ATOM 8 O4' A B 653 45.276 97.753 33.953 1.00 42.33 O
ATOM 9 C3' A B 653 45.124 100.039 33.501 1.00 42.02 C
ATOM 10 O3' A B 653 45.137 101.320 34.110 1.00 41.29 O
ATOM 11 C2' A B 653 46.516 99.588 33.084 1.00 42.94 C
ATOM 12 O2' A B 653 47.500 99.965 34.023 1.00 42.23 O
ATOM 13 C1' A B 653 46.360 98.062 33.098 1.00 43.30 C
ATOM 14 N9 A B 653 46.087 97.470 31.790 1.00 45.04 N
ATOM 15 C8 A B 653 44.875 97.069 31.283 1.00 45.96 C
ATOM 16 N7 A B 653 44.950 96.551 30.081 1.00 46.64 N
ATOM 17 C5 A B 653 46.300 96.617 29.776 1.00 46.07 C
ATOM 18 C6 A B 653 47.028 96.221 28.651 1.00 46.56 C
ATOM 19 N6 A B 653 46.480 95.645 27.584 1.00 47.43 N
ATOM 20 N1 A B 653 48.359 96.436 28.657 1.00 47.70 N
ATOM 21 C2 A B 653 48.908 97.008 29.734 1.00 47.39 C
ATOM 22 N3 A B 653 48.330 97.417 30.856 1.00 44.77 N
ATOM 23 C4 A B 653 47.010 97.191 30.814 1.00 45.07 C
ATOM 24 P A B 654 44.624 102.596 33.288 1.00 43.25 P
ATOM 25 OP1 A B 654 44.569 103.716 34.252 1.00 43.14 O
ATOM 26 OP2 A B 654 43.408 102.240 32.528 1.00 41.82 O
ATOM 27 O5' A B 654 45.809 102.875 32.258 1.00 42.69 O
TER
ATOM 2 P G A 668 38.300 93.658 22.862 1.00 47.96 P
ATOM 3 OP1 G A 668 38.772 92.672 21.861 1.00 47.83 O
ATOM 4 OP2 G A 668 37.456 93.206 23.994 1.00 46.60 O
ATOM 5 O5' G A 668 39.612 94.370 23.415 1.00 49.00 O
ATOM 6 C5' G A 668 40.694 94.738 22.530 1.00 48.44 C
ATOM 7 C4' G A 668 41.831 95.348 23.319 1.00 48.38 C
ATOM 8 O4' G A 668 41.355 96.540 23.995 1.00 48.45 O
ATOM 9 C3' G A 668 42.407 94.474 24.424 1.00 47.16 C
ATOM 10 O3' G A 668 43.444 93.645 23.907 1.00 47.11 O
ATOM 11 C2' G A 668 42.982 95.503 25.385 1.00 47.88 C
ATOM 12 O2' G A 668 44.238 95.977 24.947 1.00 46.56 O
ATOM 13 C1' G A 668 41.960 96.640 25.270 1.00 48.61 C
ATOM 14 N9 G A 668 40.900 96.635 26.276 1.00 49.62 N
ATOM 15 C8 G A 668 39.660 96.060 26.160 1.00 49.75 C
ATOM 16 N7 G A 668 38.906 96.246 27.208 1.00 51.19 N
ATOM 17 C5 G A 668 39.698 96.983 28.076 1.00 52.58 C
ATOM 18 C6 G A 668 39.415 97.497 29.377 1.00 53.16 C
ATOM 19 O6 G A 668 38.372 97.393 30.044 1.00 52.81 O
ATOM 20 N1 G A 668 40.501 98.194 29.894 1.00 52.81 N
ATOM 21 C2 G A 668 41.699 98.375 29.255 1.00 52.23 C
ATOM 22 N2 G A 668 42.612 99.078 29.922 1.00 52.86 N
ATOM 23 N3 G A 668 41.979 97.904 28.051 1.00 52.03 N
ATOM 24 C4 G A 668 40.938 97.225 27.521 1.00 51.73 C
ATOM 25 P G A 669 43.236 92.054 23.801 1.00 48.37 P
ATOM 26 OP1 G A 669 43.851 91.603 22.528 1.00 46.76 O
ATOM 27 OP2 G A 669 41.804 91.763 24.069 1.00 47.73 O
ATOM 28 O5' G A 669 44.123 91.449 24.984 1.00 47.84 O
TER
ATOM 1 O3' U B 652 40.393 97.694 34.304 1.00 45.64 O
ATOM 2 P A B 653 40.919 99.087 33.692 1.00 46.04 P
ATOM 3 OP1 A B 653 40.628 100.132 34.714 1.00 43.51 O
ATOM 4 OP2 A B 653 40.400 99.250 32.307 1.00 43.44 O
ATOM 5 O5' A B 653 42.497 98.879 33.610 1.00 42.99 O
ATOM 6 C5' A B 653 43.276 98.827 34.812 1.00 42.39 C
ATOM 7 C4' A B 653 44.743 98.975 34.507 1.00 41.98 C
ATOM 8 O4' A B 653 45.276 97.753 33.953 1.00 42.33 O
ATOM 9 C3' A B 653 45.124 100.039 33.501 1.00 42.02 C
ATOM 10 O3' A B 653 45.137 101.320 34.110 1.00 41.29 O
ATOM 11 C2' A B 653 46.516 99.588 33.084 1.00 42.94 C
ATOM 12 O2' A B 653 47.500 99.965 34.023 1.00 42.23 O
ATOM 13 C1' A B 653 46.360 98.062 33.098 1.00 43.30 C
ATOM 14 N9 A B 653 46.087 97.470 31.790 1.00 45.04 N
ATOM 15 C8 A B 653 44.875 97.069 31.283 1.00 45.96 C
ATOM 16 N7 A B 653 44.950 96.551 30.081 1.00 46.64 N
ATOM 17 C5 A B 653 46.300 96.617 29.776 1.00 46.07 C
ATOM 18 C6 A B 653 47.028 96.221 28.651 1.00 46.56 C
ATOM 19 N6 A B 653 46.480 95.645 27.584 1.00 47.43 N
ATOM 20 N1 A B 653 48.359 96.436 28.657 1.00 47.70 N
ATOM 21 C2 A B 653 48.908 97.008 29.734 1.00 47.39 C
ATOM 22 N3 A B 653 48.330 97.417 30.856 1.00 44.77 N
ATOM 23 C4 A B 653 47.010 97.191 30.814 1.00 45.07 C
ATOM 24 P A B 654 44.624 102.596 33.288 1.00 43.25 P
ATOM 25 OP1 A B 654 44.569 103.716 34.252 1.00 43.14 O
ATOM 26 OP2 A B 654 43.408 102.240 32.528 1.00 41.82 O
ATOM 27 O5' A B 654 45.809 102.875 32.258 1.00 42.69 O
TER
Atoms:
OP1: (38.772,92.672,21.861)
OP2: (37.456,93.206,23.994)
C3': (42.407,94.474,24.424)
C1': (41.960,96.640,25.270)
C5': (40.694,94.738,22.530)
O6: (38.372,97.393,30.044)
O4': (41.355,96.540,23.995)
C8: (39.660,96.060,26.160)
C2: (41.699,98.375,29.255)
C6: (39.415,97.497,29.377)
C5: (39.698,96.983,28.076)
C4: (40.938,97.225,27.521)
P: (38.300,93.658,22.862)
C4': (41.831,95.348,23.319)
C2': (42.982,95.503,25.385)
O2': (44.238,95.977,24.947)
N1: (40.501,98.194,29.894)
N2: (42.612,99.078,29.922)
N3: (41.979,97.904,28.051)
N7: (38.906,96.246,27.208)
N9: (40.900,96.635,26.276)
O5': (39.612,94.370,23.415)
O3': (43.444,93.645,23.907)
OP2: (37.456,93.206,23.994)
C3': (42.407,94.474,24.424)
C1': (41.960,96.640,25.270)
C5': (40.694,94.738,22.530)
O6: (38.372,97.393,30.044)
O4': (41.355,96.540,23.995)
C8: (39.660,96.060,26.160)
C2: (41.699,98.375,29.255)
C6: (39.415,97.497,29.377)
C5: (39.698,96.983,28.076)
C4: (40.938,97.225,27.521)
P: (38.300,93.658,22.862)
C4': (41.831,95.348,23.319)
C2': (42.982,95.503,25.385)
O2': (44.238,95.977,24.947)
N1: (40.501,98.194,29.894)
N2: (42.612,99.078,29.922)
N3: (41.979,97.904,28.051)
N7: (38.906,96.246,27.208)
N9: (40.900,96.635,26.276)
O5': (39.612,94.370,23.415)
O3': (43.444,93.645,23.907)
OP1: (40.628,100.132,34.714)
OP2: (40.400,99.250,32.307)
C3': (45.124,100.039,33.501)
C1': (46.360,98.062,33.098)
C5': (43.276,98.827,34.812)
O4': (45.276,97.753,33.953)
C8: (44.875,97.069,31.283)
O2': (47.500,99.965,34.023)
C6: (47.028,96.221,28.651)
C5: (46.300,96.617,29.776)
C4: (47.010,97.191,30.814)
P: (40.919,99.087,33.692)
C4': (44.743,98.975,34.507)
C2': (46.516,99.588,33.084)
C2: (48.908,97.008,29.734)
N1: (48.359,96.436,28.657)
N3: (48.330,97.417,30.856)
N6: (46.480,95.645,27.584)
N7: (44.950,96.551,30.081)
N9: (46.087,97.470,31.790)
O5': (42.497,98.879,33.610)
O3': (45.137,101.320,34.110)
OP2: (40.400,99.250,32.307)
C3': (45.124,100.039,33.501)
C1': (46.360,98.062,33.098)
C5': (43.276,98.827,34.812)
O4': (45.276,97.753,33.953)
C8: (44.875,97.069,31.283)
O2': (47.500,99.965,34.023)
C6: (47.028,96.221,28.651)
C5: (46.300,96.617,29.776)
C4: (47.010,97.191,30.814)
P: (40.919,99.087,33.692)
C4': (44.743,98.975,34.507)
C2': (46.516,99.588,33.084)
C2: (48.908,97.008,29.734)
N1: (48.359,96.436,28.657)
N3: (48.330,97.417,30.856)
N6: (46.480,95.645,27.584)
N7: (44.950,96.551,30.081)
N9: (46.087,97.470,31.790)
O5': (42.497,98.879,33.610)
O3': (45.137,101.320,34.110)
Image (generated by PyMOL):