Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1326:A1302
Extra
PDB:
ATOM 1 O3' C A1325 30.382 -37.389 -42.363 1.00 34.88 O
ATOM 2 P G A1326 29.787 -37.474 -40.876 1.00 47.32 P
ATOM 3 OP1 G A1326 29.574 -38.913 -40.594 1.00 41.65 O
ATOM 4 OP2 G A1326 28.612 -36.534 -40.781 1.00 36.40 O
ATOM 5 O5' G A1326 30.994 -36.917 -39.995 1.00 48.54 O
ATOM 6 C5' G A1326 32.058 -37.764 -39.583 1.00 41.98 C
ATOM 7 C4' G A1326 32.952 -37.067 -38.604 1.00 37.29 C
ATOM 8 O4' G A1326 33.536 -35.898 -39.225 1.00 41.96 O
ATOM 9 C3' G A1326 32.262 -36.542 -37.366 1.00 35.62 C
ATOM 10 O3' G A1326 32.153 -37.534 -36.371 1.00 43.68 O
ATOM 11 C2' G A1326 33.135 -35.361 -36.951 1.00 42.53 C
ATOM 12 O2' G A1326 34.275 -35.805 -36.216 1.00 43.37 O
ATOM 13 C1' G A1326 33.609 -34.836 -38.305 1.00 43.05 C
ATOM 14 N9 G A1326 32.771 -33.738 -38.813 1.00 40.77 N
ATOM 15 C8 G A1326 31.604 -33.941 -39.475 1.00 45.26 C
ATOM 16 N7 G A1326 31.047 -32.836 -39.884 1.00 48.49 N
ATOM 17 C5 G A1326 31.912 -31.839 -39.492 1.00 45.97 C
ATOM 18 C6 G A1326 31.807 -30.435 -39.684 1.00 54.89 C
ATOM 19 O6 G A1326 30.894 -29.793 -40.238 1.00 57.14 O
ATOM 20 N1 G A1326 32.907 -29.775 -39.156 1.00 42.71 N
ATOM 21 C2 G A1326 33.935 -30.409 -38.531 1.00 37.09 C
ATOM 22 N2 G A1326 34.890 -29.602 -38.080 1.00 43.42 N
ATOM 23 N3 G A1326 34.039 -31.710 -38.352 1.00 41.02 N
ATOM 24 C4 G A1326 32.994 -32.377 -38.848 1.00 40.72 C
ATOM 25 P A A1327 30.725 -37.948 -35.760 1.00 47.11 P
ATOM 26 OP1 A A1327 30.775 -39.415 -35.531 1.00 38.48 O
ATOM 27 OP2 A A1327 29.677 -37.402 -36.652 1.00 47.31 O
ATOM 28 O5' A A1327 30.694 -37.171 -34.361 1.00 33.64 O
TER
ATOM 1 O3' U B1301 31.125 -25.534 -38.931 1.00 40.76 O
ATOM 2 P A B1302 32.680 -25.961 -38.884 1.00 38.77 P
ATOM 3 OP1 A B1302 33.461 -24.723 -39.137 1.00 42.80 O
ATOM 4 OP2 A B1302 32.853 -27.118 -39.816 1.00 30.42 O
ATOM 5 O5' A B1302 32.886 -26.440 -37.372 1.00 30.53 O
ATOM 6 C5' A B1302 32.874 -25.507 -36.318 1.00 31.14 C
ATOM 7 C4' A B1302 33.668 -25.980 -35.119 1.00 36.91 C
ATOM 8 O4' A B1302 32.948 -27.003 -34.407 1.00 38.26 O
ATOM 9 C3' A B1302 35.031 -26.601 -35.371 1.00 31.27 C
ATOM 10 O3' A B1302 36.023 -25.628 -35.618 1.00 30.01 O
ATOM 11 C2' A B1302 35.270 -27.348 -34.065 1.00 36.37 C
ATOM 12 O2' A B1302 35.714 -26.446 -33.070 1.00 37.71 O
ATOM 13 C1' A B1302 33.859 -27.787 -33.679 1.00 37.01 C
ATOM 14 N9 A B1302 33.592 -29.203 -33.956 1.00 39.45 N
ATOM 15 C8 A B1302 32.903 -29.694 -35.022 1.00 39.36 C
ATOM 16 N7 A B1302 32.760 -31.000 -35.003 1.00 44.53 N
ATOM 17 C5 A B1302 33.395 -31.380 -33.842 1.00 36.28 C
ATOM 18 C6 A B1302 33.572 -32.640 -33.284 1.00 36.95 C
ATOM 19 N6 A B1302 33.106 -33.769 -33.843 1.00 37.52 N
ATOM 20 N1 A B1302 34.241 -32.673 -32.118 1.00 38.43 N
ATOM 21 C2 A B1302 34.685 -31.523 -31.596 1.00 36.89 C
ATOM 22 N3 A B1302 34.577 -30.282 -32.036 1.00 34.29 N
ATOM 23 C4 A B1302 33.901 -30.284 -33.178 1.00 34.99 C
ATOM 24 P A B1303 37.072 -25.792 -36.823 1.00 43.89 P
ATOM 25 OP1 A B1303 37.444 -24.408 -37.245 1.00 49.56 O
ATOM 26 OP2 A B1303 36.472 -26.698 -37.831 1.00 38.87 O
ATOM 27 O5' A B1303 38.320 -26.523 -36.124 1.00 41.20 O
TER
ATOM 2 P G A1326 29.787 -37.474 -40.876 1.00 47.32 P
ATOM 3 OP1 G A1326 29.574 -38.913 -40.594 1.00 41.65 O
ATOM 4 OP2 G A1326 28.612 -36.534 -40.781 1.00 36.40 O
ATOM 5 O5' G A1326 30.994 -36.917 -39.995 1.00 48.54 O
ATOM 6 C5' G A1326 32.058 -37.764 -39.583 1.00 41.98 C
ATOM 7 C4' G A1326 32.952 -37.067 -38.604 1.00 37.29 C
ATOM 8 O4' G A1326 33.536 -35.898 -39.225 1.00 41.96 O
ATOM 9 C3' G A1326 32.262 -36.542 -37.366 1.00 35.62 C
ATOM 10 O3' G A1326 32.153 -37.534 -36.371 1.00 43.68 O
ATOM 11 C2' G A1326 33.135 -35.361 -36.951 1.00 42.53 C
ATOM 12 O2' G A1326 34.275 -35.805 -36.216 1.00 43.37 O
ATOM 13 C1' G A1326 33.609 -34.836 -38.305 1.00 43.05 C
ATOM 14 N9 G A1326 32.771 -33.738 -38.813 1.00 40.77 N
ATOM 15 C8 G A1326 31.604 -33.941 -39.475 1.00 45.26 C
ATOM 16 N7 G A1326 31.047 -32.836 -39.884 1.00 48.49 N
ATOM 17 C5 G A1326 31.912 -31.839 -39.492 1.00 45.97 C
ATOM 18 C6 G A1326 31.807 -30.435 -39.684 1.00 54.89 C
ATOM 19 O6 G A1326 30.894 -29.793 -40.238 1.00 57.14 O
ATOM 20 N1 G A1326 32.907 -29.775 -39.156 1.00 42.71 N
ATOM 21 C2 G A1326 33.935 -30.409 -38.531 1.00 37.09 C
ATOM 22 N2 G A1326 34.890 -29.602 -38.080 1.00 43.42 N
ATOM 23 N3 G A1326 34.039 -31.710 -38.352 1.00 41.02 N
ATOM 24 C4 G A1326 32.994 -32.377 -38.848 1.00 40.72 C
ATOM 25 P A A1327 30.725 -37.948 -35.760 1.00 47.11 P
ATOM 26 OP1 A A1327 30.775 -39.415 -35.531 1.00 38.48 O
ATOM 27 OP2 A A1327 29.677 -37.402 -36.652 1.00 47.31 O
ATOM 28 O5' A A1327 30.694 -37.171 -34.361 1.00 33.64 O
TER
ATOM 1 O3' U B1301 31.125 -25.534 -38.931 1.00 40.76 O
ATOM 2 P A B1302 32.680 -25.961 -38.884 1.00 38.77 P
ATOM 3 OP1 A B1302 33.461 -24.723 -39.137 1.00 42.80 O
ATOM 4 OP2 A B1302 32.853 -27.118 -39.816 1.00 30.42 O
ATOM 5 O5' A B1302 32.886 -26.440 -37.372 1.00 30.53 O
ATOM 6 C5' A B1302 32.874 -25.507 -36.318 1.00 31.14 C
ATOM 7 C4' A B1302 33.668 -25.980 -35.119 1.00 36.91 C
ATOM 8 O4' A B1302 32.948 -27.003 -34.407 1.00 38.26 O
ATOM 9 C3' A B1302 35.031 -26.601 -35.371 1.00 31.27 C
ATOM 10 O3' A B1302 36.023 -25.628 -35.618 1.00 30.01 O
ATOM 11 C2' A B1302 35.270 -27.348 -34.065 1.00 36.37 C
ATOM 12 O2' A B1302 35.714 -26.446 -33.070 1.00 37.71 O
ATOM 13 C1' A B1302 33.859 -27.787 -33.679 1.00 37.01 C
ATOM 14 N9 A B1302 33.592 -29.203 -33.956 1.00 39.45 N
ATOM 15 C8 A B1302 32.903 -29.694 -35.022 1.00 39.36 C
ATOM 16 N7 A B1302 32.760 -31.000 -35.003 1.00 44.53 N
ATOM 17 C5 A B1302 33.395 -31.380 -33.842 1.00 36.28 C
ATOM 18 C6 A B1302 33.572 -32.640 -33.284 1.00 36.95 C
ATOM 19 N6 A B1302 33.106 -33.769 -33.843 1.00 37.52 N
ATOM 20 N1 A B1302 34.241 -32.673 -32.118 1.00 38.43 N
ATOM 21 C2 A B1302 34.685 -31.523 -31.596 1.00 36.89 C
ATOM 22 N3 A B1302 34.577 -30.282 -32.036 1.00 34.29 N
ATOM 23 C4 A B1302 33.901 -30.284 -33.178 1.00 34.99 C
ATOM 24 P A B1303 37.072 -25.792 -36.823 1.00 43.89 P
ATOM 25 OP1 A B1303 37.444 -24.408 -37.245 1.00 49.56 O
ATOM 26 OP2 A B1303 36.472 -26.698 -37.831 1.00 38.87 O
ATOM 27 O5' A B1303 38.320 -26.523 -36.124 1.00 41.20 O
TER
Atoms:
OP1: (29.574,-38.913,-40.594)
OP2: (28.612,-36.534,-40.781)
C3': (32.262,-36.542,-37.366)
C1': (33.609,-34.836,-38.305)
C5': (32.058,-37.764,-39.583)
O6: (30.894,-29.793,-40.238)
O4': (33.536,-35.898,-39.225)
C8: (31.604,-33.941,-39.475)
C2: (33.935,-30.409,-38.531)
C6: (31.807,-30.435,-39.684)
C5: (31.912,-31.839,-39.492)
C4: (32.994,-32.377,-38.848)
P: (29.787,-37.474,-40.876)
C4': (32.952,-37.067,-38.604)
C2': (33.135,-35.361,-36.951)
O2': (34.275,-35.805,-36.216)
N1: (32.907,-29.775,-39.156)
N2: (34.890,-29.602,-38.080)
N3: (34.039,-31.710,-38.352)
N7: (31.047,-32.836,-39.884)
N9: (32.771,-33.738,-38.813)
O5': (30.994,-36.917,-39.995)
O3': (32.153,-37.534,-36.371)
OP2: (28.612,-36.534,-40.781)
C3': (32.262,-36.542,-37.366)
C1': (33.609,-34.836,-38.305)
C5': (32.058,-37.764,-39.583)
O6: (30.894,-29.793,-40.238)
O4': (33.536,-35.898,-39.225)
C8: (31.604,-33.941,-39.475)
C2: (33.935,-30.409,-38.531)
C6: (31.807,-30.435,-39.684)
C5: (31.912,-31.839,-39.492)
C4: (32.994,-32.377,-38.848)
P: (29.787,-37.474,-40.876)
C4': (32.952,-37.067,-38.604)
C2': (33.135,-35.361,-36.951)
O2': (34.275,-35.805,-36.216)
N1: (32.907,-29.775,-39.156)
N2: (34.890,-29.602,-38.080)
N3: (34.039,-31.710,-38.352)
N7: (31.047,-32.836,-39.884)
N9: (32.771,-33.738,-38.813)
O5': (30.994,-36.917,-39.995)
O3': (32.153,-37.534,-36.371)
OP1: (33.461,-24.723,-39.137)
OP2: (32.853,-27.118,-39.816)
C3': (35.031,-26.601,-35.371)
C1': (33.859,-27.787,-33.679)
C5': (32.874,-25.507,-36.318)
O4': (32.948,-27.003,-34.407)
C8: (32.903,-29.694,-35.022)
O2': (35.714,-26.446,-33.070)
C6: (33.572,-32.640,-33.284)
C5: (33.395,-31.380,-33.842)
C4: (33.901,-30.284,-33.178)
P: (32.680,-25.961,-38.884)
C4': (33.668,-25.980,-35.119)
C2': (35.270,-27.348,-34.065)
C2: (34.685,-31.523,-31.596)
N1: (34.241,-32.673,-32.118)
N3: (34.577,-30.282,-32.036)
N6: (33.106,-33.769,-33.843)
N7: (32.760,-31.000,-35.003)
N9: (33.592,-29.203,-33.956)
O5': (32.886,-26.440,-37.372)
O3': (36.023,-25.628,-35.618)
OP2: (32.853,-27.118,-39.816)
C3': (35.031,-26.601,-35.371)
C1': (33.859,-27.787,-33.679)
C5': (32.874,-25.507,-36.318)
O4': (32.948,-27.003,-34.407)
C8: (32.903,-29.694,-35.022)
O2': (35.714,-26.446,-33.070)
C6: (33.572,-32.640,-33.284)
C5: (33.395,-31.380,-33.842)
C4: (33.901,-30.284,-33.178)
P: (32.680,-25.961,-38.884)
C4': (33.668,-25.980,-35.119)
C2': (35.270,-27.348,-34.065)
C2: (34.685,-31.523,-31.596)
N1: (34.241,-32.673,-32.118)
N3: (34.577,-30.282,-32.036)
N6: (33.106,-33.769,-33.843)
N7: (32.760,-31.000,-35.003)
N9: (33.592,-29.203,-33.956)
O5': (32.886,-26.440,-37.372)
O3': (36.023,-25.628,-35.618)
Image (generated by PyMOL):