ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHY:A1488:A1491

Extra

PDB:
ATOM 1 O3' C A1487 86.527 5.417 -5.666 1.00 79.37 O
ATOM 2 P G A1488 87.163 4.455 -4.553 1.00 77.31 P
ATOM 3 OP1 G A1488 87.546 3.194 -5.247 1.00 79.83 O
ATOM 4 OP2 G A1488 86.208 4.397 -3.420 1.00 67.36 O
ATOM 5 O5' G A1488 88.459 5.241 -4.116 1.00 74.21 O
ATOM 6 C5' G A1488 89.394 5.669 -5.087 1.00 86.93 C
ATOM 7 C4' G A1488 90.403 6.605 -4.489 1.00 83.16 C
ATOM 8 O4' G A1488 89.759 7.860 -4.154 1.00 86.02 O
ATOM 9 C3' G A1488 91.025 6.140 -3.183 1.00 85.43 C
ATOM 10 O3' G A1488 92.098 5.230 -3.378 1.00 99.96 O
ATOM 11 C2' G A1488 91.438 7.447 -2.516 1.00 88.50 C
ATOM 12 O2' G A1488 92.678 7.917 -3.028 1.00 89.38 O
ATOM 13 C1' G A1488 90.323 8.391 -2.976 1.00 87.91 C
ATOM 14 N9 G A1488 89.266 8.528 -1.957 1.00 85.04 N
ATOM 15 C8 G A1488 88.047 7.903 -1.837 1.00 86.59 C
ATOM 16 N7 G A1488 87.387 8.283 -0.765 1.00 88.75 N
ATOM 17 C5 G A1488 88.228 9.204 -0.150 1.00 86.70 C
ATOM 18 C6 G A1488 88.091 9.959 1.037 1.00 81.67 C
ATOM 19 O6 G A1488 87.165 9.988 1.840 1.00 83.03 O
ATOM 20 N1 G A1488 89.195 10.762 1.261 1.00 91.73 N
ATOM 21 C2 G A1488 90.311 10.835 0.461 1.00 92.91 C
ATOM 22 N2 G A1488 91.299 11.665 0.836 1.00 91.84 N
ATOM 23 N3 G A1488 90.456 10.132 -0.638 1.00 89.83 N
ATOM 24 C4 G A1488 89.383 9.357 -0.879 1.00 87.13 C
ATOM 25 P G A1489 92.236 3.924 -2.452 1.00 82.19 P
ATOM 26 OP1 G A1489 93.373 3.128 -2.980 1.00 97.90 O
ATOM 27 OP2 G A1489 90.902 3.300 -2.379 1.00 95.31 O
ATOM 28 O5' G A1489 92.621 4.535 -1.049 1.00 94.55 O
TER

ATOM 1 O3' A B1490 91.787 11.153 5.741 1.00 75.29 O
ATOM 2 P A B1491 90.473 11.866 5.152 1.00 90.43 P
ATOM 3 OP1 A B1491 89.462 11.895 6.234 1.00 80.98 O
ATOM 4 OP2 A B1491 90.136 11.186 3.886 1.00 99.85 O
ATOM 5 O5' A B1491 90.976 13.337 4.849 1.00 94.47 O
ATOM 6 C5' A B1491 90.795 14.373 5.803 1.00 90.12 C
ATOM 7 C4' A B1491 92.081 15.108 6.053 1.00 76.45 C
ATOM 8 O4' A B1491 93.193 14.310 5.562 1.00 80.06 O
ATOM 9 C3' A B1491 92.247 16.431 5.327 1.00 72.75 C
ATOM 10 O3' A B1491 91.566 17.501 5.952 1.00 70.34 O
ATOM 11 C2' A B1491 93.752 16.590 5.333 1.00 83.05 C
ATOM 12 O2' A B1491 94.194 16.917 6.640 1.00 81.23 O
ATOM 13 C1' A B1491 94.187 15.159 5.031 1.00 84.32 C
ATOM 14 N9 A B1491 94.299 14.919 3.576 1.00 86.09 N
ATOM 15 C8 A B1491 93.388 14.384 2.699 1.00 88.37 C
ATOM 16 N7 A B1491 93.811 14.338 1.454 1.00 95.27 N
ATOM 17 C5 A B1491 95.087 14.879 1.500 1.00 95.10 C
ATOM 18 C6 A B1491 96.076 15.118 0.516 1.00 94.01 C
ATOM 19 N6 A B1491 95.989 14.846 -0.789 1.00 86.10 N
ATOM 20 N1 A B1491 97.223 15.675 0.944 1.00 98.33 N
ATOM 21 C2 A B1491 97.362 15.963 2.246 1.00 93.46 C
ATOM 22 N3 A B1491 96.519 15.791 3.255 1.00 83.80 N
ATOM 23 C4 A B1491 95.387 15.238 2.808 1.00 89.52 C
ATOM 24 P G B1492 90.228 18.105 5.302 1.00 78.33 P
ATOM 25 OP1 G B1492 90.298 19.582 5.435 1.00 82.06 O
ATOM 26 OP2 G B1492 89.094 17.389 5.915 1.00 88.31 O
ATOM 27 O5' G B1492 90.342 17.700 3.777 1.00 72.01 O
TER

Atoms:
OP1: (87.546,3.194,-5.247)
OP2: (86.208,4.397,-3.420)
C3': (91.025,6.140,-3.183)
C1': (90.323,8.391,-2.976)
C5': (89.394,5.669,-5.087)
O6: (87.165,9.988,1.840)
O4': (89.759,7.860,-4.154)
C8: (88.047,7.903,-1.837)
C2: (90.311,10.835,0.461)
C6: (88.091,9.959,1.037)
C5: (88.228,9.204,-0.150)
C4: (89.383,9.357,-0.879)
P: (87.163,4.455,-4.553)
C4': (90.403,6.605,-4.489)
C2': (91.438,7.447,-2.516)
O2': (92.678,7.917,-3.028)
N1: (89.195,10.762,1.261)
N2: (91.299,11.665,0.836)
N3: (90.456,10.132,-0.638)
N7: (87.387,8.283,-0.765)
N9: (89.266,8.528,-1.957)
O5': (88.459,5.241,-4.116)
O3': (92.098,5.230,-3.378)
OP1: (89.462,11.895,6.234)
OP2: (90.136,11.186,3.886)
C3': (92.247,16.431,5.327)
C1': (94.187,15.159,5.031)
C5': (90.795,14.373,5.803)
O4': (93.193,14.310,5.562)
C8: (93.388,14.384,2.699)
O2': (94.194,16.917,6.640)
C6: (96.076,15.118,0.516)
C5: (95.087,14.879,1.500)
C4: (95.387,15.238,2.808)
P: (90.473,11.866,5.152)
C4': (92.081,15.108,6.053)
C2': (93.752,16.590,5.333)
C2: (97.362,15.963,2.246)
N1: (97.223,15.675,0.944)
N3: (96.519,15.791,3.255)
N6: (95.989,14.846,-0.789)
N7: (93.811,14.338,1.454)
N9: (94.299,14.919,3.576)
O5': (90.976,13.337,4.849)
O3': (91.566,17.501,5.952)
Image (generated by PyMOL):
PyMOL image
show in jmol