ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CCE:0257:0229

Extra

PDB:
ATOM 1 O3' U A 256 79.903 107.870 -4.505 1.00 47.38 O
ATOM 2 P G A 257 78.587 107.571 -3.634 1.00 48.43 P
ATOM 3 OP1 G A 257 77.665 106.689 -4.401 1.00 46.92 O
ATOM 4 OP2 G A 257 78.104 108.885 -3.131 1.00 48.37 O
ATOM 5 O5' G A 257 79.134 106.735 -2.399 1.00 47.14 O
ATOM 6 C5' G A 257 79.970 105.584 -2.590 1.00 46.84 C
ATOM 7 C4' G A 257 80.601 105.206 -1.277 1.00 48.41 C
ATOM 8 O4' G A 257 81.607 106.188 -0.915 1.00 49.16 O
ATOM 9 C3' G A 257 79.616 105.225 -0.122 1.00 47.52 C
ATOM 10 O3' G A 257 78.935 103.983 -0.050 1.00 49.20 O
ATOM 11 C2' G A 257 80.513 105.483 1.078 1.00 47.32 C
ATOM 12 O2' G A 257 81.161 104.305 1.516 1.00 49.29 O
ATOM 13 C1' G A 257 81.548 106.443 0.480 1.00 46.05 C
ATOM 14 N9 G A 257 81.259 107.863 0.666 1.00 42.63 N
ATOM 15 C8 G A 257 80.201 108.573 0.152 1.00 41.25 C
ATOM 16 N7 G A 257 80.221 109.835 0.484 1.00 40.06 N
ATOM 17 C5 G A 257 81.358 109.965 1.268 1.00 39.03 C
ATOM 18 C6 G A 257 81.900 111.100 1.920 1.00 38.12 C
ATOM 19 O6 G A 257 81.471 112.256 1.935 1.00 36.76 O
ATOM 20 N1 G A 257 83.065 110.785 2.607 1.00 36.14 N
ATOM 21 C2 G A 257 83.639 109.542 2.661 1.00 36.99 C
ATOM 22 N2 G A 257 84.764 109.436 3.377 1.00 36.45 N
ATOM 23 N3 G A 257 83.146 108.477 2.059 1.00 38.82 N
ATOM 24 C4 G A 257 82.011 108.758 1.388 1.00 40.03 C
ATOM 25 P U A 258 77.466 103.918 0.576 1.00 48.94 P
ATOM 26 OP1 U A 258 76.846 102.664 0.091 1.00 49.72 O
ATOM 27 OP2 U A 258 76.789 105.217 0.328 1.00 47.42 O
ATOM 28 O5' U A 258 77.758 103.746 2.129 1.00 51.04 O
TER

ATOM 1 O3' C B 228 83.610 113.149 6.249 1.00 44.21 O
ATOM 2 P A B 229 84.914 112.871 5.351 1.00 46.20 P
ATOM 3 OP1 A B 229 85.610 114.180 5.202 1.00 46.53 O
ATOM 4 OP2 A B 229 84.492 112.126 4.137 1.00 45.91 O
ATOM 5 O5' A B 229 85.822 111.918 6.247 1.00 42.33 O
ATOM 6 C5' A B 229 86.440 112.412 7.432 1.00 41.83 C
ATOM 7 C4' A B 229 87.160 111.301 8.146 1.00 43.37 C
ATOM 8 O4' A B 229 86.214 110.309 8.604 1.00 44.33 O
ATOM 9 C3' A B 229 88.072 110.464 7.278 1.00 44.33 C
ATOM 10 O3' A B 229 89.284 111.136 7.008 1.00 45.15 O
ATOM 11 C2' A B 229 88.277 109.226 8.143 1.00 44.03 C
ATOM 12 O2' A B 229 89.239 109.412 9.159 1.00 42.33 O
ATOM 13 C1' A B 229 86.897 109.081 8.790 1.00 44.42 C
ATOM 14 N9 A B 229 86.093 107.996 8.229 1.00 45.48 N
ATOM 15 C8 A B 229 85.121 108.053 7.260 1.00 45.06 C
ATOM 16 N7 A B 229 84.589 106.888 6.978 1.00 46.23 N
ATOM 17 C5 A B 229 85.256 106.004 7.819 1.00 45.85 C
ATOM 18 C6 A B 229 85.159 104.611 8.005 1.00 46.63 C
ATOM 19 N6 A B 229 84.323 103.828 7.317 1.00 47.91 N
ATOM 20 N1 A B 229 85.966 104.042 8.929 1.00 45.88 N
ATOM 21 C2 A B 229 86.817 104.821 9.605 1.00 44.01 C
ATOM 22 N3 A B 229 87.007 106.132 9.514 1.00 44.62 N
ATOM 23 C4 A B 229 86.184 106.672 8.594 1.00 45.40 C
ATOM 24 P A B 230 89.824 111.200 5.502 1.00 46.94 P
ATOM 25 OP1 A B 230 91.118 111.934 5.536 1.00 46.67 O
ATOM 26 OP2 A B 230 88.714 111.682 4.621 1.00 44.62 O
ATOM 27 O5' A B 230 90.132 109.682 5.151 1.00 41.86 O
TER

Atoms:
OP1: (77.665,106.689,-4.401)
OP2: (78.104,108.885,-3.131)
C3': (79.616,105.225,-0.122)
C1': (81.548,106.443,0.480)
C5': (79.970,105.584,-2.590)
O6: (81.471,112.256,1.935)
O4': (81.607,106.188,-0.915)
C8: (80.201,108.573,0.152)
C2: (83.639,109.542,2.661)
C6: (81.900,111.100,1.920)
C5: (81.358,109.965,1.268)
C4: (82.011,108.758,1.388)
P: (78.587,107.571,-3.634)
C4': (80.601,105.206,-1.277)
C2': (80.513,105.483,1.078)
O2': (81.161,104.305,1.516)
N1: (83.065,110.785,2.607)
N2: (84.764,109.436,3.377)
N3: (83.146,108.477,2.059)
N7: (80.221,109.835,0.484)
N9: (81.259,107.863,0.666)
O5': (79.134,106.735,-2.399)
O3': (78.935,103.983,-0.050)
OP1: (85.610,114.180,5.202)
OP2: (84.492,112.126,4.137)
C3': (88.072,110.464,7.278)
C1': (86.897,109.081,8.790)
C5': (86.440,112.412,7.432)
O4': (86.214,110.309,8.604)
C8: (85.121,108.053,7.260)
O2': (89.239,109.412,9.159)
C6: (85.159,104.611,8.005)
C5: (85.256,106.004,7.819)
C4: (86.184,106.672,8.594)
P: (84.914,112.871,5.351)
C4': (87.160,111.301,8.146)
C2': (88.277,109.226,8.143)
C2: (86.817,104.821,9.605)
N1: (85.966,104.042,8.929)
N3: (87.007,106.132,9.514)
N6: (84.323,103.828,7.317)
N7: (84.589,106.888,6.978)
N9: (86.093,107.996,8.229)
O5': (85.822,111.918,6.247)
O3': (89.284,111.136,7.008)
Image (generated by PyMOL):
PyMOL image
show in jmol