Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01217:01056
Extra
PDB:
ATOM 1 O3' C A1216 12.706 104.019 112.931 1.00 40.29 O
ATOM 2 P G A1217 12.725 103.823 111.341 1.00 39.44 P
ATOM 3 OP1 G A1217 12.528 105.183 110.789 1.00 37.98 O
ATOM 4 OP2 G A1217 11.791 102.720 110.956 1.00 37.87 O
ATOM 5 O5' G A1217 14.213 103.355 111.025 1.00 38.19 O
ATOM 6 C5' G A1217 15.325 104.248 111.201 1.00 37.74 C
ATOM 7 C4' G A1217 16.617 103.518 110.933 1.00 37.72 C
ATOM 8 O4' G A1217 16.816 102.478 111.924 1.00 38.05 O
ATOM 9 C3' G A1217 16.662 102.805 109.594 1.00 36.26 C
ATOM 10 O3' G A1217 17.098 103.723 108.605 1.00 36.63 O
ATOM 11 C2' G A1217 17.661 101.682 109.846 1.00 36.74 C
ATOM 12 O2' G A1217 19.005 102.098 109.744 1.00 35.42 O
ATOM 13 C1' G A1217 17.355 101.325 111.305 1.00 37.62 C
ATOM 14 N9 G A1217 16.380 100.252 111.460 1.00 38.98 N
ATOM 15 C8 G A1217 15.011 100.380 111.492 1.00 40.10 C
ATOM 16 N7 G A1217 14.394 99.244 111.660 1.00 40.81 N
ATOM 17 C5 G A1217 15.415 98.309 111.741 1.00 40.80 C
ATOM 18 C6 G A1217 15.360 96.907 111.934 1.00 42.46 C
ATOM 19 O6 G A1217 14.360 96.185 112.077 1.00 43.61 O
ATOM 20 N1 G A1217 16.636 96.345 111.957 1.00 42.01 N
ATOM 21 C2 G A1217 17.812 97.045 111.817 1.00 39.87 C
ATOM 22 N2 G A1217 18.941 96.327 111.873 1.00 37.65 N
ATOM 23 N3 G A1217 17.874 98.353 111.639 1.00 39.63 N
ATOM 24 C4 G A1217 16.648 98.917 111.613 1.00 39.45 C
ATOM 25 P A A1218 16.458 103.695 107.139 1.00 37.62 P
ATOM 26 OP1 A A1218 16.816 104.981 106.492 1.00 35.92 O
ATOM 27 OP2 A A1218 15.036 103.286 107.216 1.00 38.72 O
ATOM 28 O5' A A1218 17.261 102.535 106.412 1.00 36.33 O
TER
ATOM 1 O3' U B1055 15.611 92.323 111.065 1.00 35.08 O
ATOM 2 P A B1056 17.014 92.580 111.781 1.00 34.69 P
ATOM 3 OP1 A B1056 17.382 91.364 112.546 1.00 35.15 O
ATOM 4 OP2 A B1056 16.909 93.878 112.476 1.00 34.42 O
ATOM 5 O5' A B1056 18.038 92.726 110.572 1.00 36.30 O
ATOM 6 C5' A B1056 18.498 91.566 109.842 1.00 38.26 C
ATOM 7 C4' A B1056 19.765 91.893 109.083 1.00 38.28 C
ATOM 8 O4' A B1056 19.467 92.859 108.046 1.00 38.86 O
ATOM 9 C3' A B1056 20.872 92.543 109.901 1.00 38.15 C
ATOM 10 O3' A B1056 21.656 91.559 110.567 1.00 35.33 O
ATOM 11 C2' A B1056 21.678 93.281 108.840 1.00 39.43 C
ATOM 12 O2' A B1056 22.574 92.439 108.146 1.00 40.69 O
ATOM 13 C1' A B1056 20.577 93.721 107.870 1.00 38.84 C
ATOM 14 N9 A B1056 20.127 95.105 108.017 1.00 37.44 N
ATOM 15 C8 A B1056 18.996 95.575 108.635 1.00 36.43 C
ATOM 16 N7 A B1056 18.851 96.874 108.554 1.00 36.61 N
ATOM 17 C5 A B1056 19.968 97.292 107.846 1.00 37.71 C
ATOM 18 C6 A B1056 20.400 98.560 107.420 1.00 38.10 C
ATOM 19 N6 A B1056 19.726 99.690 107.656 1.00 38.48 N
ATOM 20 N1 A B1056 21.561 98.628 106.733 1.00 38.04 N
ATOM 21 C2 A B1056 22.232 97.494 106.493 1.00 37.52 C
ATOM 22 N3 A B1056 21.928 96.248 106.835 1.00 36.82 N
ATOM 23 C4 A B1056 20.769 96.214 107.518 1.00 37.86 C
ATOM 24 P A B1057 22.165 91.819 112.064 1.00 32.48 P
ATOM 25 OP1 A B1057 22.732 90.538 112.524 1.00 33.12 O
ATOM 26 OP2 A B1057 21.084 92.464 112.838 1.00 33.00 O
ATOM 27 O5' A B1057 23.361 92.854 111.897 1.00 32.98 O
TER
ATOM 2 P G A1217 12.725 103.823 111.341 1.00 39.44 P
ATOM 3 OP1 G A1217 12.528 105.183 110.789 1.00 37.98 O
ATOM 4 OP2 G A1217 11.791 102.720 110.956 1.00 37.87 O
ATOM 5 O5' G A1217 14.213 103.355 111.025 1.00 38.19 O
ATOM 6 C5' G A1217 15.325 104.248 111.201 1.00 37.74 C
ATOM 7 C4' G A1217 16.617 103.518 110.933 1.00 37.72 C
ATOM 8 O4' G A1217 16.816 102.478 111.924 1.00 38.05 O
ATOM 9 C3' G A1217 16.662 102.805 109.594 1.00 36.26 C
ATOM 10 O3' G A1217 17.098 103.723 108.605 1.00 36.63 O
ATOM 11 C2' G A1217 17.661 101.682 109.846 1.00 36.74 C
ATOM 12 O2' G A1217 19.005 102.098 109.744 1.00 35.42 O
ATOM 13 C1' G A1217 17.355 101.325 111.305 1.00 37.62 C
ATOM 14 N9 G A1217 16.380 100.252 111.460 1.00 38.98 N
ATOM 15 C8 G A1217 15.011 100.380 111.492 1.00 40.10 C
ATOM 16 N7 G A1217 14.394 99.244 111.660 1.00 40.81 N
ATOM 17 C5 G A1217 15.415 98.309 111.741 1.00 40.80 C
ATOM 18 C6 G A1217 15.360 96.907 111.934 1.00 42.46 C
ATOM 19 O6 G A1217 14.360 96.185 112.077 1.00 43.61 O
ATOM 20 N1 G A1217 16.636 96.345 111.957 1.00 42.01 N
ATOM 21 C2 G A1217 17.812 97.045 111.817 1.00 39.87 C
ATOM 22 N2 G A1217 18.941 96.327 111.873 1.00 37.65 N
ATOM 23 N3 G A1217 17.874 98.353 111.639 1.00 39.63 N
ATOM 24 C4 G A1217 16.648 98.917 111.613 1.00 39.45 C
ATOM 25 P A A1218 16.458 103.695 107.139 1.00 37.62 P
ATOM 26 OP1 A A1218 16.816 104.981 106.492 1.00 35.92 O
ATOM 27 OP2 A A1218 15.036 103.286 107.216 1.00 38.72 O
ATOM 28 O5' A A1218 17.261 102.535 106.412 1.00 36.33 O
TER
ATOM 1 O3' U B1055 15.611 92.323 111.065 1.00 35.08 O
ATOM 2 P A B1056 17.014 92.580 111.781 1.00 34.69 P
ATOM 3 OP1 A B1056 17.382 91.364 112.546 1.00 35.15 O
ATOM 4 OP2 A B1056 16.909 93.878 112.476 1.00 34.42 O
ATOM 5 O5' A B1056 18.038 92.726 110.572 1.00 36.30 O
ATOM 6 C5' A B1056 18.498 91.566 109.842 1.00 38.26 C
ATOM 7 C4' A B1056 19.765 91.893 109.083 1.00 38.28 C
ATOM 8 O4' A B1056 19.467 92.859 108.046 1.00 38.86 O
ATOM 9 C3' A B1056 20.872 92.543 109.901 1.00 38.15 C
ATOM 10 O3' A B1056 21.656 91.559 110.567 1.00 35.33 O
ATOM 11 C2' A B1056 21.678 93.281 108.840 1.00 39.43 C
ATOM 12 O2' A B1056 22.574 92.439 108.146 1.00 40.69 O
ATOM 13 C1' A B1056 20.577 93.721 107.870 1.00 38.84 C
ATOM 14 N9 A B1056 20.127 95.105 108.017 1.00 37.44 N
ATOM 15 C8 A B1056 18.996 95.575 108.635 1.00 36.43 C
ATOM 16 N7 A B1056 18.851 96.874 108.554 1.00 36.61 N
ATOM 17 C5 A B1056 19.968 97.292 107.846 1.00 37.71 C
ATOM 18 C6 A B1056 20.400 98.560 107.420 1.00 38.10 C
ATOM 19 N6 A B1056 19.726 99.690 107.656 1.00 38.48 N
ATOM 20 N1 A B1056 21.561 98.628 106.733 1.00 38.04 N
ATOM 21 C2 A B1056 22.232 97.494 106.493 1.00 37.52 C
ATOM 22 N3 A B1056 21.928 96.248 106.835 1.00 36.82 N
ATOM 23 C4 A B1056 20.769 96.214 107.518 1.00 37.86 C
ATOM 24 P A B1057 22.165 91.819 112.064 1.00 32.48 P
ATOM 25 OP1 A B1057 22.732 90.538 112.524 1.00 33.12 O
ATOM 26 OP2 A B1057 21.084 92.464 112.838 1.00 33.00 O
ATOM 27 O5' A B1057 23.361 92.854 111.897 1.00 32.98 O
TER
Atoms:
OP1: (12.528,105.183,110.789)
OP2: (11.791,102.720,110.956)
C3': (16.662,102.805,109.594)
C1': (17.355,101.325,111.305)
C5': (15.325,104.248,111.201)
O6: (14.360,96.185,112.077)
O4': (16.816,102.478,111.924)
C8: (15.011,100.380,111.492)
C2: (17.812,97.045,111.817)
C6: (15.360,96.907,111.934)
C5: (15.415,98.309,111.741)
C4: (16.648,98.917,111.613)
P: (12.725,103.823,111.341)
C4': (16.617,103.518,110.933)
C2': (17.661,101.682,109.846)
O2': (19.005,102.098,109.744)
N1: (16.636,96.345,111.957)
N2: (18.941,96.327,111.873)
N3: (17.874,98.353,111.639)
N7: (14.394,99.244,111.660)
N9: (16.380,100.252,111.460)
O5': (14.213,103.355,111.025)
O3': (17.098,103.723,108.605)
OP2: (11.791,102.720,110.956)
C3': (16.662,102.805,109.594)
C1': (17.355,101.325,111.305)
C5': (15.325,104.248,111.201)
O6: (14.360,96.185,112.077)
O4': (16.816,102.478,111.924)
C8: (15.011,100.380,111.492)
C2: (17.812,97.045,111.817)
C6: (15.360,96.907,111.934)
C5: (15.415,98.309,111.741)
C4: (16.648,98.917,111.613)
P: (12.725,103.823,111.341)
C4': (16.617,103.518,110.933)
C2': (17.661,101.682,109.846)
O2': (19.005,102.098,109.744)
N1: (16.636,96.345,111.957)
N2: (18.941,96.327,111.873)
N3: (17.874,98.353,111.639)
N7: (14.394,99.244,111.660)
N9: (16.380,100.252,111.460)
O5': (14.213,103.355,111.025)
O3': (17.098,103.723,108.605)
OP1: (17.382,91.364,112.546)
OP2: (16.909,93.878,112.476)
C3': (20.872,92.543,109.901)
C1': (20.577,93.721,107.870)
C5': (18.498,91.566,109.842)
O4': (19.467,92.859,108.046)
C8: (18.996,95.575,108.635)
O2': (22.574,92.439,108.146)
C6: (20.400,98.560,107.420)
C5: (19.968,97.292,107.846)
C4: (20.769,96.214,107.518)
P: (17.014,92.580,111.781)
C4': (19.765,91.893,109.083)
C2': (21.678,93.281,108.840)
C2: (22.232,97.494,106.493)
N1: (21.561,98.628,106.733)
N3: (21.928,96.248,106.835)
N6: (19.726,99.690,107.656)
N7: (18.851,96.874,108.554)
N9: (20.127,95.105,108.017)
O5': (18.038,92.726,110.572)
O3': (21.656,91.559,110.567)
OP2: (16.909,93.878,112.476)
C3': (20.872,92.543,109.901)
C1': (20.577,93.721,107.870)
C5': (18.498,91.566,109.842)
O4': (19.467,92.859,108.046)
C8: (18.996,95.575,108.635)
O2': (22.574,92.439,108.146)
C6: (20.400,98.560,107.420)
C5: (19.968,97.292,107.846)
C4: (20.769,96.214,107.518)
P: (17.014,92.580,111.781)
C4': (19.765,91.893,109.083)
C2': (21.678,93.281,108.840)
C2: (22.232,97.494,106.493)
N1: (21.561,98.628,106.733)
N3: (21.928,96.248,106.835)
N6: (19.726,99.690,107.656)
N7: (18.851,96.874,108.554)
N9: (20.127,95.105,108.017)
O5': (18.038,92.726,110.572)
O3': (21.656,91.559,110.567)
Image (generated by PyMOL):