Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1XMQ:A540:A856
Extra
PDB:
ATOM 1 O3' U A 539 154.470 99.587 -12.526 1.00 32.83 O
ATOM 2 P C A 540 153.120 98.767 -12.284 1.00 41.12 P
ATOM 3 OP1 C A 540 152.553 99.212 -10.984 1.00 45.40 O
ATOM 4 OP2 C A 540 153.424 97.330 -12.515 1.00 45.40 O
ATOM 5 O5' C A 540 152.096 99.304 -13.375 1.00 41.12 O
ATOM 6 C5' C A 540 152.421 99.306 -14.750 1.00 41.12 C
ATOM 7 C4' C A 540 151.207 98.986 -15.581 1.00 41.12 C
ATOM 8 O4' C A 540 151.732 98.609 -16.865 1.00 41.12 O
ATOM 9 C3' C A 540 150.380 97.798 -15.095 1.00 41.12 C
ATOM 10 O3' C A 540 149.039 97.845 -15.629 1.00 41.12 O
ATOM 11 C2' C A 540 151.079 96.623 -15.762 1.00 41.12 C
ATOM 12 O2' C A 540 150.222 95.524 -15.990 1.00 41.12 O
ATOM 13 C1' C A 540 151.528 97.235 -17.087 1.00 41.12 C
ATOM 14 N1 C A 540 152.789 96.691 -17.597 1.00 45.40 N
ATOM 15 C2 C A 540 152.815 96.162 -18.874 1.00 45.40 C
ATOM 16 O2 C A 540 151.778 96.171 -19.540 1.00 45.40 O
ATOM 17 N3 C A 540 153.974 95.659 -19.358 1.00 45.40 N
ATOM 18 C4 C A 540 155.075 95.677 -18.603 1.00 45.40 C
ATOM 19 N4 C A 540 156.195 95.160 -19.111 1.00 45.40 N
ATOM 20 C5 C A 540 155.074 96.221 -17.292 1.00 45.40 C
ATOM 21 C6 C A 540 153.922 96.711 -16.832 1.00 45.40 C
ATOM 22 P A A 541 147.858 98.648 -14.867 1.00 31.18 P
ATOM 23 OP1 A A 541 147.972 98.552 -13.385 1.00 46.15 O
ATOM 24 OP2 A A 541 146.584 98.253 -15.523 1.00 46.15 O
ATOM 25 O5' A A 541 148.140 100.154 -15.294 1.00 31.18 O
TER
ATOM 1 O3' C B 855 161.624 97.480 -23.342 1.00 35.24 O
ATOM 2 P U B 856 161.507 96.258 -22.314 1.00 37.05 P
ATOM 3 OP1 U B 856 162.901 95.821 -22.021 1.00 57.77 O
ATOM 4 OP2 U B 856 160.504 95.278 -22.815 1.00 57.77 O
ATOM 5 O5' U B 856 160.940 96.947 -21.005 1.00 37.05 O
ATOM 6 C5' U B 856 161.703 97.938 -20.326 1.00 37.05 C
ATOM 7 C4' U B 856 161.082 98.208 -18.995 1.00 37.05 C
ATOM 8 O4' U B 856 159.834 98.937 -19.183 1.00 37.05 O
ATOM 9 C3' U B 856 160.747 96.955 -18.196 1.00 37.05 C
ATOM 10 O3' U B 856 161.033 97.202 -16.831 1.00 37.05 O
ATOM 11 C2' U B 856 159.236 96.799 -18.402 1.00 37.05 C
ATOM 12 O2' U B 856 158.571 96.181 -17.315 1.00 37.05 O
ATOM 13 C1' U B 856 158.787 98.254 -18.532 1.00 37.05 C
ATOM 14 N1 U B 856 157.525 98.494 -19.254 1.00 57.77 N
ATOM 15 C2 U B 856 156.701 99.503 -18.781 1.00 57.77 C
ATOM 16 O2 U B 856 157.005 100.229 -17.851 1.00 57.77 O
ATOM 17 N3 U B 856 155.505 99.635 -19.441 1.00 57.77 N
ATOM 18 C4 U B 856 155.059 98.892 -20.509 1.00 57.77 C
ATOM 19 O4 U B 856 153.903 99.039 -20.907 1.00 57.77 O
ATOM 20 C5 U B 856 155.980 97.906 -20.968 1.00 57.77 C
ATOM 21 C6 U B 856 157.153 97.743 -20.340 1.00 57.77 C
ATOM 22 P G B 857 162.157 96.339 -16.075 1.00 41.69 P
ATOM 23 OP1 G B 857 162.137 94.918 -16.525 1.00 40.13 O
ATOM 24 OP2 G B 857 162.003 96.652 -14.638 1.00 40.13 O
ATOM 25 O5' G B 857 163.521 96.985 -16.538 1.00 41.69 O
TER
ATOM 2 P C A 540 153.120 98.767 -12.284 1.00 41.12 P
ATOM 3 OP1 C A 540 152.553 99.212 -10.984 1.00 45.40 O
ATOM 4 OP2 C A 540 153.424 97.330 -12.515 1.00 45.40 O
ATOM 5 O5' C A 540 152.096 99.304 -13.375 1.00 41.12 O
ATOM 6 C5' C A 540 152.421 99.306 -14.750 1.00 41.12 C
ATOM 7 C4' C A 540 151.207 98.986 -15.581 1.00 41.12 C
ATOM 8 O4' C A 540 151.732 98.609 -16.865 1.00 41.12 O
ATOM 9 C3' C A 540 150.380 97.798 -15.095 1.00 41.12 C
ATOM 10 O3' C A 540 149.039 97.845 -15.629 1.00 41.12 O
ATOM 11 C2' C A 540 151.079 96.623 -15.762 1.00 41.12 C
ATOM 12 O2' C A 540 150.222 95.524 -15.990 1.00 41.12 O
ATOM 13 C1' C A 540 151.528 97.235 -17.087 1.00 41.12 C
ATOM 14 N1 C A 540 152.789 96.691 -17.597 1.00 45.40 N
ATOM 15 C2 C A 540 152.815 96.162 -18.874 1.00 45.40 C
ATOM 16 O2 C A 540 151.778 96.171 -19.540 1.00 45.40 O
ATOM 17 N3 C A 540 153.974 95.659 -19.358 1.00 45.40 N
ATOM 18 C4 C A 540 155.075 95.677 -18.603 1.00 45.40 C
ATOM 19 N4 C A 540 156.195 95.160 -19.111 1.00 45.40 N
ATOM 20 C5 C A 540 155.074 96.221 -17.292 1.00 45.40 C
ATOM 21 C6 C A 540 153.922 96.711 -16.832 1.00 45.40 C
ATOM 22 P A A 541 147.858 98.648 -14.867 1.00 31.18 P
ATOM 23 OP1 A A 541 147.972 98.552 -13.385 1.00 46.15 O
ATOM 24 OP2 A A 541 146.584 98.253 -15.523 1.00 46.15 O
ATOM 25 O5' A A 541 148.140 100.154 -15.294 1.00 31.18 O
TER
ATOM 1 O3' C B 855 161.624 97.480 -23.342 1.00 35.24 O
ATOM 2 P U B 856 161.507 96.258 -22.314 1.00 37.05 P
ATOM 3 OP1 U B 856 162.901 95.821 -22.021 1.00 57.77 O
ATOM 4 OP2 U B 856 160.504 95.278 -22.815 1.00 57.77 O
ATOM 5 O5' U B 856 160.940 96.947 -21.005 1.00 37.05 O
ATOM 6 C5' U B 856 161.703 97.938 -20.326 1.00 37.05 C
ATOM 7 C4' U B 856 161.082 98.208 -18.995 1.00 37.05 C
ATOM 8 O4' U B 856 159.834 98.937 -19.183 1.00 37.05 O
ATOM 9 C3' U B 856 160.747 96.955 -18.196 1.00 37.05 C
ATOM 10 O3' U B 856 161.033 97.202 -16.831 1.00 37.05 O
ATOM 11 C2' U B 856 159.236 96.799 -18.402 1.00 37.05 C
ATOM 12 O2' U B 856 158.571 96.181 -17.315 1.00 37.05 O
ATOM 13 C1' U B 856 158.787 98.254 -18.532 1.00 37.05 C
ATOM 14 N1 U B 856 157.525 98.494 -19.254 1.00 57.77 N
ATOM 15 C2 U B 856 156.701 99.503 -18.781 1.00 57.77 C
ATOM 16 O2 U B 856 157.005 100.229 -17.851 1.00 57.77 O
ATOM 17 N3 U B 856 155.505 99.635 -19.441 1.00 57.77 N
ATOM 18 C4 U B 856 155.059 98.892 -20.509 1.00 57.77 C
ATOM 19 O4 U B 856 153.903 99.039 -20.907 1.00 57.77 O
ATOM 20 C5 U B 856 155.980 97.906 -20.968 1.00 57.77 C
ATOM 21 C6 U B 856 157.153 97.743 -20.340 1.00 57.77 C
ATOM 22 P G B 857 162.157 96.339 -16.075 1.00 41.69 P
ATOM 23 OP1 G B 857 162.137 94.918 -16.525 1.00 40.13 O
ATOM 24 OP2 G B 857 162.003 96.652 -14.638 1.00 40.13 O
ATOM 25 O5' G B 857 163.521 96.985 -16.538 1.00 41.69 O
TER
Atoms:
C2: (152.815,96.162,-18.874)
OP1: (152.553,99.212,-10.984)
OP2: (153.424,97.330,-12.515)
C4: (155.075,95.677,-18.603)
O5': (152.096,99.304,-13.375)
C3': (150.380,97.798,-15.095)
C1': (151.528,97.235,-17.087)
O4': (151.732,98.609,-16.865)
C5': (152.421,99.306,-14.750)
P: (153.120,98.767,-12.284)
O2: (151.778,96.171,-19.540)
C4': (151.207,98.986,-15.581)
C2': (151.079,96.623,-15.762)
O2': (150.222,95.524,-15.990)
N1: (152.789,96.691,-17.597)
N3: (153.974,95.659,-19.358)
N4: (156.195,95.160,-19.111)
C6: (153.922,96.711,-16.832)
C5: (155.074,96.221,-17.292)
O3': (149.039,97.845,-15.629)
OP1: (152.553,99.212,-10.984)
OP2: (153.424,97.330,-12.515)
C4: (155.075,95.677,-18.603)
O5': (152.096,99.304,-13.375)
C3': (150.380,97.798,-15.095)
C1': (151.528,97.235,-17.087)
O4': (151.732,98.609,-16.865)
C5': (152.421,99.306,-14.750)
P: (153.120,98.767,-12.284)
O2: (151.778,96.171,-19.540)
C4': (151.207,98.986,-15.581)
C2': (151.079,96.623,-15.762)
O2': (150.222,95.524,-15.990)
N1: (152.789,96.691,-17.597)
N3: (153.974,95.659,-19.358)
N4: (156.195,95.160,-19.111)
C6: (153.922,96.711,-16.832)
C5: (155.074,96.221,-17.292)
O3': (149.039,97.845,-15.629)
C4: (155.059,98.892,-20.509)
N3: (155.505,99.635,-19.441)
OP1: (162.901,95.821,-22.021)
OP2: (160.504,95.278,-22.815)
C2: (156.701,99.503,-18.781)
C1': (158.787,98.254,-18.532)
C3': (160.747,96.955,-18.196)
O5': (160.940,96.947,-21.005)
O4': (159.834,98.937,-19.183)
C5': (161.703,97.938,-20.326)
P: (161.507,96.258,-22.314)
C4': (161.082,98.208,-18.995)
C2': (159.236,96.799,-18.402)
O2': (158.571,96.181,-17.315)
N1: (157.525,98.494,-19.254)
O4: (153.903,99.039,-20.907)
O2: (157.005,100.229,-17.851)
C6: (157.153,97.743,-20.340)
C5: (155.980,97.906,-20.968)
O3': (161.033,97.202,-16.831)
N3: (155.505,99.635,-19.441)
OP1: (162.901,95.821,-22.021)
OP2: (160.504,95.278,-22.815)
C2: (156.701,99.503,-18.781)
C1': (158.787,98.254,-18.532)
C3': (160.747,96.955,-18.196)
O5': (160.940,96.947,-21.005)
O4': (159.834,98.937,-19.183)
C5': (161.703,97.938,-20.326)
P: (161.507,96.258,-22.314)
C4': (161.082,98.208,-18.995)
C2': (159.236,96.799,-18.402)
O2': (158.571,96.181,-17.315)
N1: (157.525,98.494,-19.254)
O4: (153.903,99.039,-20.907)
O2: (157.005,100.229,-17.851)
C6: (157.153,97.743,-20.340)
C5: (155.980,97.906,-20.968)
O3': (161.033,97.202,-16.831)
Image (generated by PyMOL):