Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1373:A1519
Extra
PDB:
ATOM 1 O3' C A1372 4.057 -18.048 -49.736 1.00 79.92 O
ATOM 2 P G A1373 5.596 -18.155 -49.306 1.00 73.44 P
ATOM 3 OP1 G A1373 5.791 -19.321 -48.406 1.00 65.31 O
ATOM 4 OP2 G A1373 5.959 -16.799 -48.834 1.00 73.55 O
ATOM 5 O5' G A1373 6.369 -18.442 -50.665 1.00 70.24 O
ATOM 6 C5' G A1373 6.322 -19.718 -51.289 1.00 73.97 C
ATOM 7 C4' G A1373 7.043 -19.663 -52.613 1.00 74.12 C
ATOM 8 O4' G A1373 6.557 -18.499 -53.315 1.00 76.91 O
ATOM 9 C3' G A1373 8.559 -19.503 -52.551 1.00 78.31 C
ATOM 10 O3' G A1373 9.164 -20.803 -52.591 1.00 85.48 O
ATOM 11 C2' G A1373 8.870 -18.717 -53.831 1.00 76.46 C
ATOM 12 O2' G A1373 8.955 -19.532 -54.982 1.00 78.36 O
ATOM 13 C1' G A1373 7.617 -17.859 -53.992 1.00 75.51 C
ATOM 14 N9 G A1373 7.697 -16.492 -53.488 1.00 73.66 N
ATOM 15 C8 G A1373 7.341 -16.056 -52.232 1.00 77.79 C
ATOM 16 N7 G A1373 7.448 -14.766 -52.089 1.00 76.46 N
ATOM 17 C5 G A1373 7.917 -14.326 -53.317 1.00 75.51 C
ATOM 18 C6 G A1373 8.215 -13.019 -53.766 1.00 80.69 C
ATOM 19 O6 G A1373 8.115 -11.945 -53.149 1.00 84.21 O
ATOM 20 N1 G A1373 8.666 -13.026 -55.080 1.00 81.60 N
ATOM 21 C2 G A1373 8.813 -14.148 -55.860 1.00 83.64 C
ATOM 22 N2 G A1373 9.274 -13.947 -57.104 1.00 86.89 N
ATOM 23 N3 G A1373 8.533 -15.372 -55.451 1.00 76.20 N
ATOM 24 C4 G A1373 8.093 -15.386 -54.183 1.00 71.20 C
ATOM 25 P A A1374 9.959 -21.391 -51.311 1.00 79.77 P
ATOM 26 OP1 A A1374 10.405 -22.763 -51.671 1.00 74.89 O
ATOM 27 OP2 A A1374 9.116 -21.188 -50.107 1.00 80.84 O
ATOM 28 O5' A A1374 11.265 -20.485 -51.177 1.00 84.11 O
TER
ATOM 1 O3' U B1518 10.312 -8.486 -54.672 1.00 77.80 O
ATOM 2 P A B1519 10.062 -9.169 -56.107 1.00 84.49 P
ATOM 3 OP1 A B1519 9.253 -8.251 -56.941 1.00 82.54 O
ATOM 4 OP2 A B1519 9.600 -10.572 -55.903 1.00 84.07 O
ATOM 5 O5' A B1519 11.510 -9.240 -56.752 1.00 69.56 O
ATOM 6 C5' A B1519 12.449 -10.181 -56.278 1.00 74.29 C
ATOM 7 C4' A B1519 13.177 -10.812 -57.425 1.00 77.96 C
ATOM 8 O4' A B1519 14.039 -11.838 -56.874 1.00 75.17 O
ATOM 9 C3' A B1519 12.304 -11.524 -58.446 1.00 83.87 C
ATOM 10 O3' A B1519 11.848 -10.613 -59.464 1.00 85.29 O
ATOM 11 C2' A B1519 13.246 -12.599 -58.980 1.00 83.44 C
ATOM 12 O2' A B1519 14.119 -12.082 -59.968 1.00 81.93 O
ATOM 13 C1' A B1519 14.061 -12.959 -57.732 1.00 78.54 C
ATOM 14 N9 A B1519 13.572 -14.121 -56.976 1.00 80.02 N
ATOM 15 C8 A B1519 12.629 -14.157 -55.977 1.00 77.85 C
ATOM 16 N7 A B1519 12.412 -15.358 -55.501 1.00 81.49 N
ATOM 17 C5 A B1519 13.269 -16.167 -56.235 1.00 80.48 C
ATOM 18 C6 A B1519 13.515 -17.553 -56.217 1.00 84.01 C
ATOM 19 N6 A B1519 12.890 -18.407 -55.412 1.00 89.07 N
ATOM 20 N1 A B1519 14.438 -18.040 -57.072 1.00 85.79 N
ATOM 21 C2 A B1519 15.060 -17.190 -57.891 1.00 89.13 C
ATOM 22 N3 A B1519 14.912 -15.874 -58.009 1.00 86.05 N
ATOM 23 C4 A B1519 13.990 -15.419 -57.141 1.00 81.52 C
ATOM 24 P A B1520 10.886 -11.133 -60.655 1.00 74.91 P
ATOM 25 OP1 A B1520 10.026 -10.023 -61.138 1.00 79.13 O
ATOM 26 OP2 A B1520 10.254 -12.379 -60.171 1.00 79.08 O
ATOM 27 O5' A B1520 11.909 -11.516 -61.817 1.00 74.77 O
TER
ATOM 2 P G A1373 5.596 -18.155 -49.306 1.00 73.44 P
ATOM 3 OP1 G A1373 5.791 -19.321 -48.406 1.00 65.31 O
ATOM 4 OP2 G A1373 5.959 -16.799 -48.834 1.00 73.55 O
ATOM 5 O5' G A1373 6.369 -18.442 -50.665 1.00 70.24 O
ATOM 6 C5' G A1373 6.322 -19.718 -51.289 1.00 73.97 C
ATOM 7 C4' G A1373 7.043 -19.663 -52.613 1.00 74.12 C
ATOM 8 O4' G A1373 6.557 -18.499 -53.315 1.00 76.91 O
ATOM 9 C3' G A1373 8.559 -19.503 -52.551 1.00 78.31 C
ATOM 10 O3' G A1373 9.164 -20.803 -52.591 1.00 85.48 O
ATOM 11 C2' G A1373 8.870 -18.717 -53.831 1.00 76.46 C
ATOM 12 O2' G A1373 8.955 -19.532 -54.982 1.00 78.36 O
ATOM 13 C1' G A1373 7.617 -17.859 -53.992 1.00 75.51 C
ATOM 14 N9 G A1373 7.697 -16.492 -53.488 1.00 73.66 N
ATOM 15 C8 G A1373 7.341 -16.056 -52.232 1.00 77.79 C
ATOM 16 N7 G A1373 7.448 -14.766 -52.089 1.00 76.46 N
ATOM 17 C5 G A1373 7.917 -14.326 -53.317 1.00 75.51 C
ATOM 18 C6 G A1373 8.215 -13.019 -53.766 1.00 80.69 C
ATOM 19 O6 G A1373 8.115 -11.945 -53.149 1.00 84.21 O
ATOM 20 N1 G A1373 8.666 -13.026 -55.080 1.00 81.60 N
ATOM 21 C2 G A1373 8.813 -14.148 -55.860 1.00 83.64 C
ATOM 22 N2 G A1373 9.274 -13.947 -57.104 1.00 86.89 N
ATOM 23 N3 G A1373 8.533 -15.372 -55.451 1.00 76.20 N
ATOM 24 C4 G A1373 8.093 -15.386 -54.183 1.00 71.20 C
ATOM 25 P A A1374 9.959 -21.391 -51.311 1.00 79.77 P
ATOM 26 OP1 A A1374 10.405 -22.763 -51.671 1.00 74.89 O
ATOM 27 OP2 A A1374 9.116 -21.188 -50.107 1.00 80.84 O
ATOM 28 O5' A A1374 11.265 -20.485 -51.177 1.00 84.11 O
TER
ATOM 1 O3' U B1518 10.312 -8.486 -54.672 1.00 77.80 O
ATOM 2 P A B1519 10.062 -9.169 -56.107 1.00 84.49 P
ATOM 3 OP1 A B1519 9.253 -8.251 -56.941 1.00 82.54 O
ATOM 4 OP2 A B1519 9.600 -10.572 -55.903 1.00 84.07 O
ATOM 5 O5' A B1519 11.510 -9.240 -56.752 1.00 69.56 O
ATOM 6 C5' A B1519 12.449 -10.181 -56.278 1.00 74.29 C
ATOM 7 C4' A B1519 13.177 -10.812 -57.425 1.00 77.96 C
ATOM 8 O4' A B1519 14.039 -11.838 -56.874 1.00 75.17 O
ATOM 9 C3' A B1519 12.304 -11.524 -58.446 1.00 83.87 C
ATOM 10 O3' A B1519 11.848 -10.613 -59.464 1.00 85.29 O
ATOM 11 C2' A B1519 13.246 -12.599 -58.980 1.00 83.44 C
ATOM 12 O2' A B1519 14.119 -12.082 -59.968 1.00 81.93 O
ATOM 13 C1' A B1519 14.061 -12.959 -57.732 1.00 78.54 C
ATOM 14 N9 A B1519 13.572 -14.121 -56.976 1.00 80.02 N
ATOM 15 C8 A B1519 12.629 -14.157 -55.977 1.00 77.85 C
ATOM 16 N7 A B1519 12.412 -15.358 -55.501 1.00 81.49 N
ATOM 17 C5 A B1519 13.269 -16.167 -56.235 1.00 80.48 C
ATOM 18 C6 A B1519 13.515 -17.553 -56.217 1.00 84.01 C
ATOM 19 N6 A B1519 12.890 -18.407 -55.412 1.00 89.07 N
ATOM 20 N1 A B1519 14.438 -18.040 -57.072 1.00 85.79 N
ATOM 21 C2 A B1519 15.060 -17.190 -57.891 1.00 89.13 C
ATOM 22 N3 A B1519 14.912 -15.874 -58.009 1.00 86.05 N
ATOM 23 C4 A B1519 13.990 -15.419 -57.141 1.00 81.52 C
ATOM 24 P A B1520 10.886 -11.133 -60.655 1.00 74.91 P
ATOM 25 OP1 A B1520 10.026 -10.023 -61.138 1.00 79.13 O
ATOM 26 OP2 A B1520 10.254 -12.379 -60.171 1.00 79.08 O
ATOM 27 O5' A B1520 11.909 -11.516 -61.817 1.00 74.77 O
TER
Atoms:
OP1: (5.791,-19.321,-48.406)
OP2: (5.959,-16.799,-48.834)
C3': (8.559,-19.503,-52.551)
C1': (7.617,-17.859,-53.992)
C5': (6.322,-19.718,-51.289)
O6: (8.115,-11.945,-53.149)
O4': (6.557,-18.499,-53.315)
C8: (7.341,-16.056,-52.232)
C2: (8.813,-14.148,-55.860)
C6: (8.215,-13.019,-53.766)
C5: (7.917,-14.326,-53.317)
C4: (8.093,-15.386,-54.183)
P: (5.596,-18.155,-49.306)
C4': (7.043,-19.663,-52.613)
C2': (8.870,-18.717,-53.831)
O2': (8.955,-19.532,-54.982)
N1: (8.666,-13.026,-55.080)
N2: (9.274,-13.947,-57.104)
N3: (8.533,-15.372,-55.451)
N7: (7.448,-14.766,-52.089)
N9: (7.697,-16.492,-53.488)
O5': (6.369,-18.442,-50.665)
O3': (9.164,-20.803,-52.591)
OP2: (5.959,-16.799,-48.834)
C3': (8.559,-19.503,-52.551)
C1': (7.617,-17.859,-53.992)
C5': (6.322,-19.718,-51.289)
O6: (8.115,-11.945,-53.149)
O4': (6.557,-18.499,-53.315)
C8: (7.341,-16.056,-52.232)
C2: (8.813,-14.148,-55.860)
C6: (8.215,-13.019,-53.766)
C5: (7.917,-14.326,-53.317)
C4: (8.093,-15.386,-54.183)
P: (5.596,-18.155,-49.306)
C4': (7.043,-19.663,-52.613)
C2': (8.870,-18.717,-53.831)
O2': (8.955,-19.532,-54.982)
N1: (8.666,-13.026,-55.080)
N2: (9.274,-13.947,-57.104)
N3: (8.533,-15.372,-55.451)
N7: (7.448,-14.766,-52.089)
N9: (7.697,-16.492,-53.488)
O5': (6.369,-18.442,-50.665)
O3': (9.164,-20.803,-52.591)
OP1: (9.253,-8.251,-56.941)
OP2: (9.600,-10.572,-55.903)
C3': (12.304,-11.524,-58.446)
C1': (14.061,-12.959,-57.732)
C5': (12.449,-10.181,-56.278)
O4': (14.039,-11.838,-56.874)
C8: (12.629,-14.157,-55.977)
O2': (14.119,-12.082,-59.968)
C6: (13.515,-17.553,-56.217)
C5: (13.269,-16.167,-56.235)
C4: (13.990,-15.419,-57.141)
P: (10.062,-9.169,-56.107)
C4': (13.177,-10.812,-57.425)
C2': (13.246,-12.599,-58.980)
C2: (15.060,-17.190,-57.891)
N1: (14.438,-18.040,-57.072)
N3: (14.912,-15.874,-58.009)
N6: (12.890,-18.407,-55.412)
N7: (12.412,-15.358,-55.501)
N9: (13.572,-14.121,-56.976)
O5': (11.510,-9.240,-56.752)
O3': (11.848,-10.613,-59.464)
OP2: (9.600,-10.572,-55.903)
C3': (12.304,-11.524,-58.446)
C1': (14.061,-12.959,-57.732)
C5': (12.449,-10.181,-56.278)
O4': (14.039,-11.838,-56.874)
C8: (12.629,-14.157,-55.977)
O2': (14.119,-12.082,-59.968)
C6: (13.515,-17.553,-56.217)
C5: (13.269,-16.167,-56.235)
C4: (13.990,-15.419,-57.141)
P: (10.062,-9.169,-56.107)
C4': (13.177,-10.812,-57.425)
C2': (13.246,-12.599,-58.980)
C2: (15.060,-17.190,-57.891)
N1: (14.438,-18.040,-57.072)
N3: (14.912,-15.874,-58.009)
N6: (12.890,-18.407,-55.412)
N7: (12.412,-15.358,-55.501)
N9: (13.572,-14.121,-56.976)
O5': (11.510,-9.240,-56.752)
O3': (11.848,-10.613,-59.464)
Image (generated by PyMOL):