Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQP:0580:0553
Extra
PDB:
ATOM 1 O3' A A 579 -6.536 102.348 106.196 1.00 55.94 O
ATOM 2 P G A 580 -6.483 102.686 104.626 1.00 54.02 P
ATOM 3 OP1 G A 580 -6.280 104.147 104.517 1.00 54.70 O
ATOM 4 OP2 G A 580 -7.649 102.047 103.960 1.00 55.57 O
ATOM 5 O5' G A 580 -5.180 101.931 104.103 1.00 54.66 O
ATOM 6 C5' G A 580 -3.864 102.244 104.613 1.00 50.37 C
ATOM 7 C4' G A 580 -2.850 101.308 104.005 1.00 49.90 C
ATOM 8 O4' G A 580 -3.098 99.958 104.474 1.00 48.81 O
ATOM 9 C3' G A 580 -2.927 101.211 102.489 1.00 49.89 C
ATOM 10 O3' G A 580 -2.116 102.202 101.875 1.00 51.91 O
ATOM 11 C2' G A 580 -2.355 99.827 102.211 1.00 48.84 C
ATOM 12 O2' G A 580 -0.947 99.810 102.157 1.00 52.11 O
ATOM 13 C1' G A 580 -2.847 99.034 103.427 1.00 47.74 C
ATOM 14 N9 G A 580 -4.078 98.306 103.146 1.00 46.46 N
ATOM 15 C8 G A 580 -5.367 98.746 103.345 1.00 46.31 C
ATOM 16 N7 G A 580 -6.266 97.893 102.940 1.00 46.72 N
ATOM 17 C5 G A 580 -5.529 96.821 102.460 1.00 44.85 C
ATOM 18 C6 G A 580 -5.956 95.614 101.883 1.00 43.89 C
ATOM 19 O6 G A 580 -7.108 95.239 101.664 1.00 47.29 O
ATOM 20 N1 G A 580 -4.883 94.803 101.537 1.00 43.69 N
ATOM 21 C2 G A 580 -3.560 95.120 101.725 1.00 44.99 C
ATOM 22 N2 G A 580 -2.662 94.193 101.344 1.00 44.41 N
ATOM 23 N3 G A 580 -3.147 96.256 102.253 1.00 43.82 N
ATOM 24 C4 G A 580 -4.178 97.054 102.595 1.00 44.93 C
ATOM 25 P A A 581 -2.754 103.596 101.399 1.00 53.82 P
ATOM 26 OP1 A A 581 -2.632 104.554 102.531 1.00 52.01 O
ATOM 27 OP2 A A 581 -4.075 103.375 100.768 1.00 53.45 O
ATOM 28 O5' A A 581 -1.743 104.063 100.261 1.00 55.02 O
TER
ATOM 1 O3' G B 552 -5.858 93.488 97.221 1.00 49.26 O
ATOM 2 P A B 553 -5.378 92.518 98.413 1.00 50.69 P
ATOM 3 OP1 A B 553 -5.953 91.178 98.143 1.00 47.80 O
ATOM 4 OP2 A B 553 -5.591 93.164 99.733 1.00 44.54 O
ATOM 5 O5' A B 553 -3.808 92.396 98.156 1.00 50.47 O
ATOM 6 C5' A B 553 -3.316 91.721 96.978 1.00 48.90 C
ATOM 7 C4' A B 553 -1.822 91.899 96.840 1.00 48.10 C
ATOM 8 O4' A B 553 -1.497 93.250 96.426 1.00 48.72 O
ATOM 9 C3' A B 553 -1.011 91.711 98.105 1.00 48.01 C
ATOM 10 O3' A B 553 -0.837 90.332 98.384 1.00 47.45 O
ATOM 11 C2' A B 553 0.293 92.409 97.747 1.00 46.04 C
ATOM 12 O2' A B 553 1.093 91.600 96.908 1.00 47.09 O
ATOM 13 C1' A B 553 -0.219 93.600 96.931 1.00 44.99 C
ATOM 14 N9 A B 553 -0.334 94.865 97.658 1.00 44.13 N
ATOM 15 C8 A B 553 -1.473 95.470 98.127 1.00 42.65 C
ATOM 16 N7 A B 553 -1.257 96.634 98.698 1.00 44.77 N
ATOM 17 C5 A B 553 0.119 96.803 98.607 1.00 42.38 C
ATOM 18 C6 A B 553 0.980 97.847 99.015 1.00 41.19 C
ATOM 19 N6 A B 553 0.568 98.958 99.619 1.00 42.80 N
ATOM 20 N1 A B 553 2.296 97.704 98.776 1.00 40.92 N
ATOM 21 C2 A B 553 2.717 96.588 98.167 1.00 42.21 C
ATOM 22 N3 A B 553 2.011 95.545 97.729 1.00 43.39 N
ATOM 23 C4 A B 553 0.702 95.717 97.982 1.00 43.11 C
ATOM 24 P A B 554 -0.927 89.819 99.898 1.00 47.98 P
ATOM 25 OP1 A B 554 -1.161 88.348 99.828 1.00 46.28 O
ATOM 26 OP2 A B 554 -1.873 90.690 100.647 1.00 47.60 O
ATOM 27 O5' A B 554 0.527 90.098 100.484 1.00 47.90 O
TER
ATOM 2 P G A 580 -6.483 102.686 104.626 1.00 54.02 P
ATOM 3 OP1 G A 580 -6.280 104.147 104.517 1.00 54.70 O
ATOM 4 OP2 G A 580 -7.649 102.047 103.960 1.00 55.57 O
ATOM 5 O5' G A 580 -5.180 101.931 104.103 1.00 54.66 O
ATOM 6 C5' G A 580 -3.864 102.244 104.613 1.00 50.37 C
ATOM 7 C4' G A 580 -2.850 101.308 104.005 1.00 49.90 C
ATOM 8 O4' G A 580 -3.098 99.958 104.474 1.00 48.81 O
ATOM 9 C3' G A 580 -2.927 101.211 102.489 1.00 49.89 C
ATOM 10 O3' G A 580 -2.116 102.202 101.875 1.00 51.91 O
ATOM 11 C2' G A 580 -2.355 99.827 102.211 1.00 48.84 C
ATOM 12 O2' G A 580 -0.947 99.810 102.157 1.00 52.11 O
ATOM 13 C1' G A 580 -2.847 99.034 103.427 1.00 47.74 C
ATOM 14 N9 G A 580 -4.078 98.306 103.146 1.00 46.46 N
ATOM 15 C8 G A 580 -5.367 98.746 103.345 1.00 46.31 C
ATOM 16 N7 G A 580 -6.266 97.893 102.940 1.00 46.72 N
ATOM 17 C5 G A 580 -5.529 96.821 102.460 1.00 44.85 C
ATOM 18 C6 G A 580 -5.956 95.614 101.883 1.00 43.89 C
ATOM 19 O6 G A 580 -7.108 95.239 101.664 1.00 47.29 O
ATOM 20 N1 G A 580 -4.883 94.803 101.537 1.00 43.69 N
ATOM 21 C2 G A 580 -3.560 95.120 101.725 1.00 44.99 C
ATOM 22 N2 G A 580 -2.662 94.193 101.344 1.00 44.41 N
ATOM 23 N3 G A 580 -3.147 96.256 102.253 1.00 43.82 N
ATOM 24 C4 G A 580 -4.178 97.054 102.595 1.00 44.93 C
ATOM 25 P A A 581 -2.754 103.596 101.399 1.00 53.82 P
ATOM 26 OP1 A A 581 -2.632 104.554 102.531 1.00 52.01 O
ATOM 27 OP2 A A 581 -4.075 103.375 100.768 1.00 53.45 O
ATOM 28 O5' A A 581 -1.743 104.063 100.261 1.00 55.02 O
TER
ATOM 1 O3' G B 552 -5.858 93.488 97.221 1.00 49.26 O
ATOM 2 P A B 553 -5.378 92.518 98.413 1.00 50.69 P
ATOM 3 OP1 A B 553 -5.953 91.178 98.143 1.00 47.80 O
ATOM 4 OP2 A B 553 -5.591 93.164 99.733 1.00 44.54 O
ATOM 5 O5' A B 553 -3.808 92.396 98.156 1.00 50.47 O
ATOM 6 C5' A B 553 -3.316 91.721 96.978 1.00 48.90 C
ATOM 7 C4' A B 553 -1.822 91.899 96.840 1.00 48.10 C
ATOM 8 O4' A B 553 -1.497 93.250 96.426 1.00 48.72 O
ATOM 9 C3' A B 553 -1.011 91.711 98.105 1.00 48.01 C
ATOM 10 O3' A B 553 -0.837 90.332 98.384 1.00 47.45 O
ATOM 11 C2' A B 553 0.293 92.409 97.747 1.00 46.04 C
ATOM 12 O2' A B 553 1.093 91.600 96.908 1.00 47.09 O
ATOM 13 C1' A B 553 -0.219 93.600 96.931 1.00 44.99 C
ATOM 14 N9 A B 553 -0.334 94.865 97.658 1.00 44.13 N
ATOM 15 C8 A B 553 -1.473 95.470 98.127 1.00 42.65 C
ATOM 16 N7 A B 553 -1.257 96.634 98.698 1.00 44.77 N
ATOM 17 C5 A B 553 0.119 96.803 98.607 1.00 42.38 C
ATOM 18 C6 A B 553 0.980 97.847 99.015 1.00 41.19 C
ATOM 19 N6 A B 553 0.568 98.958 99.619 1.00 42.80 N
ATOM 20 N1 A B 553 2.296 97.704 98.776 1.00 40.92 N
ATOM 21 C2 A B 553 2.717 96.588 98.167 1.00 42.21 C
ATOM 22 N3 A B 553 2.011 95.545 97.729 1.00 43.39 N
ATOM 23 C4 A B 553 0.702 95.717 97.982 1.00 43.11 C
ATOM 24 P A B 554 -0.927 89.819 99.898 1.00 47.98 P
ATOM 25 OP1 A B 554 -1.161 88.348 99.828 1.00 46.28 O
ATOM 26 OP2 A B 554 -1.873 90.690 100.647 1.00 47.60 O
ATOM 27 O5' A B 554 0.527 90.098 100.484 1.00 47.90 O
TER
Atoms:
OP1: (-6.280,104.147,104.517)
OP2: (-7.649,102.047,103.960)
C3': (-2.927,101.211,102.489)
C1': (-2.847,99.034,103.427)
C5': (-3.864,102.244,104.613)
O6: (-7.108,95.239,101.664)
O4': (-3.098,99.958,104.474)
C8: (-5.367,98.746,103.345)
C2: (-3.560,95.120,101.725)
C6: (-5.956,95.614,101.883)
C5: (-5.529,96.821,102.460)
C4: (-4.178,97.054,102.595)
P: (-6.483,102.686,104.626)
C4': (-2.850,101.308,104.005)
C2': (-2.355,99.827,102.211)
O2': (-0.947,99.810,102.157)
N1: (-4.883,94.803,101.537)
N2: (-2.662,94.193,101.344)
N3: (-3.147,96.256,102.253)
N7: (-6.266,97.893,102.940)
N9: (-4.078,98.306,103.146)
O5': (-5.180,101.931,104.103)
O3': (-2.116,102.202,101.875)
OP2: (-7.649,102.047,103.960)
C3': (-2.927,101.211,102.489)
C1': (-2.847,99.034,103.427)
C5': (-3.864,102.244,104.613)
O6: (-7.108,95.239,101.664)
O4': (-3.098,99.958,104.474)
C8: (-5.367,98.746,103.345)
C2: (-3.560,95.120,101.725)
C6: (-5.956,95.614,101.883)
C5: (-5.529,96.821,102.460)
C4: (-4.178,97.054,102.595)
P: (-6.483,102.686,104.626)
C4': (-2.850,101.308,104.005)
C2': (-2.355,99.827,102.211)
O2': (-0.947,99.810,102.157)
N1: (-4.883,94.803,101.537)
N2: (-2.662,94.193,101.344)
N3: (-3.147,96.256,102.253)
N7: (-6.266,97.893,102.940)
N9: (-4.078,98.306,103.146)
O5': (-5.180,101.931,104.103)
O3': (-2.116,102.202,101.875)
OP1: (-5.953,91.178,98.143)
OP2: (-5.591,93.164,99.733)
C3': (-1.011,91.711,98.105)
C1': (-0.219,93.600,96.931)
C5': (-3.316,91.721,96.978)
O4': (-1.497,93.250,96.426)
C8: (-1.473,95.470,98.127)
O2': (1.093,91.600,96.908)
C6: (0.980,97.847,99.015)
C5: (0.119,96.803,98.607)
C4: (0.702,95.717,97.982)
P: (-5.378,92.518,98.413)
C4': (-1.822,91.899,96.840)
C2': (0.293,92.409,97.747)
C2: (2.717,96.588,98.167)
N1: (2.296,97.704,98.776)
N3: (2.011,95.545,97.729)
N6: (0.568,98.958,99.619)
N7: (-1.257,96.634,98.698)
N9: (-0.334,94.865,97.658)
O5': (-3.808,92.396,98.156)
O3': (-0.837,90.332,98.384)
OP2: (-5.591,93.164,99.733)
C3': (-1.011,91.711,98.105)
C1': (-0.219,93.600,96.931)
C5': (-3.316,91.721,96.978)
O4': (-1.497,93.250,96.426)
C8: (-1.473,95.470,98.127)
O2': (1.093,91.600,96.908)
C6: (0.980,97.847,99.015)
C5: (0.119,96.803,98.607)
C4: (0.702,95.717,97.982)
P: (-5.378,92.518,98.413)
C4': (-1.822,91.899,96.840)
C2': (0.293,92.409,97.747)
C2: (2.717,96.588,98.167)
N1: (2.296,97.704,98.776)
N3: (2.011,95.545,97.729)
N6: (0.568,98.958,99.619)
N7: (-1.257,96.634,98.698)
N9: (-0.334,94.865,97.658)
O5': (-3.808,92.396,98.156)
O3': (-0.837,90.332,98.384)
Image (generated by PyMOL):