Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:01217:01056
Extra
PDB:
ATOM 1 O3' C A1216 12.877 103.515 113.080 1.00 33.75 O
ATOM 2 P G A1217 12.818 103.318 111.488 1.00 33.32 P
ATOM 3 OP1 G A1217 12.479 104.649 110.950 1.00 33.02 O
ATOM 4 OP2 G A1217 11.970 102.153 111.158 1.00 32.23 O
ATOM 5 O5' G A1217 14.307 102.938 111.068 1.00 33.75 O
ATOM 6 C5' G A1217 15.425 103.803 111.365 1.00 31.14 C
ATOM 7 C4' G A1217 16.723 103.076 111.090 1.00 30.18 C
ATOM 8 O4' G A1217 16.884 101.990 112.039 1.00 30.38 O
ATOM 9 C3' G A1217 16.782 102.411 109.724 1.00 31.22 C
ATOM 10 O3' G A1217 17.205 103.346 108.737 1.00 30.27 O
ATOM 11 C2' G A1217 17.759 101.259 109.941 1.00 30.89 C
ATOM 12 O2' G A1217 19.115 101.640 109.869 1.00 30.70 O
ATOM 13 C1' G A1217 17.441 100.858 111.385 1.00 30.81 C
ATOM 14 N9 G A1217 16.504 99.748 111.518 1.00 32.06 N
ATOM 15 C8 G A1217 15.132 99.818 111.495 1.00 32.54 C
ATOM 16 N7 G A1217 14.557 98.660 111.664 1.00 32.93 N
ATOM 17 C5 G A1217 15.606 97.771 111.809 1.00 32.63 C
ATOM 18 C6 G A1217 15.593 96.376 112.029 1.00 35.16 C
ATOM 19 O6 G A1217 14.614 95.627 112.155 1.00 39.81 O
ATOM 20 N1 G A1217 16.882 95.857 112.104 1.00 33.67 N
ATOM 21 C2 G A1217 18.039 96.593 111.992 1.00 32.71 C
ATOM 22 N2 G A1217 19.189 95.913 112.105 1.00 29.99 N
ATOM 23 N3 G A1217 18.064 97.901 111.791 1.00 32.28 N
ATOM 24 C4 G A1217 16.818 98.422 111.710 1.00 33.10 C
ATOM 25 P A A1218 16.588 103.284 107.256 1.00 33.71 P
ATOM 26 OP1 A A1218 16.851 104.604 106.616 1.00 34.26 O
ATOM 27 OP2 A A1218 15.192 102.775 107.321 1.00 34.17 O
ATOM 28 O5' A A1218 17.479 102.185 106.526 1.00 30.27 O
TER
ATOM 1 O3' U B1055 15.759 91.767 111.176 1.00 31.95 O
ATOM 2 P A B1056 17.140 92.045 111.933 1.00 33.18 P
ATOM 3 OP1 A B1056 17.508 90.830 112.695 1.00 36.10 O
ATOM 4 OP2 A B1056 16.994 93.342 112.637 1.00 30.38 O
ATOM 5 O5' A B1056 18.201 92.201 110.751 1.00 35.91 O
ATOM 6 C5' A B1056 18.636 91.053 109.987 1.00 32.64 C
ATOM 7 C4' A B1056 19.906 91.373 109.224 1.00 32.44 C
ATOM 8 O4' A B1056 19.636 92.338 108.175 1.00 32.50 O
ATOM 9 C3' A B1056 21.028 92.011 110.031 1.00 32.07 C
ATOM 10 O3' A B1056 21.768 91.023 110.739 1.00 30.40 O
ATOM 11 C2' A B1056 21.865 92.678 108.946 1.00 30.19 C
ATOM 12 O2' A B1056 22.681 91.750 108.259 1.00 31.33 O
ATOM 13 C1' A B1056 20.781 93.152 107.975 1.00 29.90 C
ATOM 14 N9 A B1056 20.394 94.557 108.113 1.00 29.74 N
ATOM 15 C8 A B1056 19.296 95.078 108.751 1.00 28.74 C
ATOM 16 N7 A B1056 19.195 96.378 108.652 1.00 27.25 N
ATOM 17 C5 A B1056 20.308 96.744 107.910 1.00 29.26 C
ATOM 18 C6 A B1056 20.769 97.992 107.442 1.00 29.35 C
ATOM 19 N6 A B1056 20.123 99.143 107.641 1.00 26.60 N
ATOM 20 N1 A B1056 21.924 98.012 106.741 1.00 30.11 N
ATOM 21 C2 A B1056 22.554 96.852 106.510 1.00 30.27 C
ATOM 22 N3 A B1056 22.212 95.619 106.879 1.00 30.46 N
ATOM 23 C4 A B1056 21.066 95.634 107.586 1.00 30.21 C
ATOM 24 P A B1057 22.314 91.336 112.213 1.00 31.16 P
ATOM 25 OP1 A B1057 22.838 90.043 112.708 1.00 29.13 O
ATOM 26 OP2 A B1057 21.262 92.051 112.978 1.00 27.55 O
ATOM 27 O5' A B1057 23.535 92.333 111.975 1.00 30.83 O
TER
ATOM 2 P G A1217 12.818 103.318 111.488 1.00 33.32 P
ATOM 3 OP1 G A1217 12.479 104.649 110.950 1.00 33.02 O
ATOM 4 OP2 G A1217 11.970 102.153 111.158 1.00 32.23 O
ATOM 5 O5' G A1217 14.307 102.938 111.068 1.00 33.75 O
ATOM 6 C5' G A1217 15.425 103.803 111.365 1.00 31.14 C
ATOM 7 C4' G A1217 16.723 103.076 111.090 1.00 30.18 C
ATOM 8 O4' G A1217 16.884 101.990 112.039 1.00 30.38 O
ATOM 9 C3' G A1217 16.782 102.411 109.724 1.00 31.22 C
ATOM 10 O3' G A1217 17.205 103.346 108.737 1.00 30.27 O
ATOM 11 C2' G A1217 17.759 101.259 109.941 1.00 30.89 C
ATOM 12 O2' G A1217 19.115 101.640 109.869 1.00 30.70 O
ATOM 13 C1' G A1217 17.441 100.858 111.385 1.00 30.81 C
ATOM 14 N9 G A1217 16.504 99.748 111.518 1.00 32.06 N
ATOM 15 C8 G A1217 15.132 99.818 111.495 1.00 32.54 C
ATOM 16 N7 G A1217 14.557 98.660 111.664 1.00 32.93 N
ATOM 17 C5 G A1217 15.606 97.771 111.809 1.00 32.63 C
ATOM 18 C6 G A1217 15.593 96.376 112.029 1.00 35.16 C
ATOM 19 O6 G A1217 14.614 95.627 112.155 1.00 39.81 O
ATOM 20 N1 G A1217 16.882 95.857 112.104 1.00 33.67 N
ATOM 21 C2 G A1217 18.039 96.593 111.992 1.00 32.71 C
ATOM 22 N2 G A1217 19.189 95.913 112.105 1.00 29.99 N
ATOM 23 N3 G A1217 18.064 97.901 111.791 1.00 32.28 N
ATOM 24 C4 G A1217 16.818 98.422 111.710 1.00 33.10 C
ATOM 25 P A A1218 16.588 103.284 107.256 1.00 33.71 P
ATOM 26 OP1 A A1218 16.851 104.604 106.616 1.00 34.26 O
ATOM 27 OP2 A A1218 15.192 102.775 107.321 1.00 34.17 O
ATOM 28 O5' A A1218 17.479 102.185 106.526 1.00 30.27 O
TER
ATOM 1 O3' U B1055 15.759 91.767 111.176 1.00 31.95 O
ATOM 2 P A B1056 17.140 92.045 111.933 1.00 33.18 P
ATOM 3 OP1 A B1056 17.508 90.830 112.695 1.00 36.10 O
ATOM 4 OP2 A B1056 16.994 93.342 112.637 1.00 30.38 O
ATOM 5 O5' A B1056 18.201 92.201 110.751 1.00 35.91 O
ATOM 6 C5' A B1056 18.636 91.053 109.987 1.00 32.64 C
ATOM 7 C4' A B1056 19.906 91.373 109.224 1.00 32.44 C
ATOM 8 O4' A B1056 19.636 92.338 108.175 1.00 32.50 O
ATOM 9 C3' A B1056 21.028 92.011 110.031 1.00 32.07 C
ATOM 10 O3' A B1056 21.768 91.023 110.739 1.00 30.40 O
ATOM 11 C2' A B1056 21.865 92.678 108.946 1.00 30.19 C
ATOM 12 O2' A B1056 22.681 91.750 108.259 1.00 31.33 O
ATOM 13 C1' A B1056 20.781 93.152 107.975 1.00 29.90 C
ATOM 14 N9 A B1056 20.394 94.557 108.113 1.00 29.74 N
ATOM 15 C8 A B1056 19.296 95.078 108.751 1.00 28.74 C
ATOM 16 N7 A B1056 19.195 96.378 108.652 1.00 27.25 N
ATOM 17 C5 A B1056 20.308 96.744 107.910 1.00 29.26 C
ATOM 18 C6 A B1056 20.769 97.992 107.442 1.00 29.35 C
ATOM 19 N6 A B1056 20.123 99.143 107.641 1.00 26.60 N
ATOM 20 N1 A B1056 21.924 98.012 106.741 1.00 30.11 N
ATOM 21 C2 A B1056 22.554 96.852 106.510 1.00 30.27 C
ATOM 22 N3 A B1056 22.212 95.619 106.879 1.00 30.46 N
ATOM 23 C4 A B1056 21.066 95.634 107.586 1.00 30.21 C
ATOM 24 P A B1057 22.314 91.336 112.213 1.00 31.16 P
ATOM 25 OP1 A B1057 22.838 90.043 112.708 1.00 29.13 O
ATOM 26 OP2 A B1057 21.262 92.051 112.978 1.00 27.55 O
ATOM 27 O5' A B1057 23.535 92.333 111.975 1.00 30.83 O
TER
Atoms:
OP1: (12.479,104.649,110.950)
OP2: (11.970,102.153,111.158)
C3': (16.782,102.411,109.724)
C1': (17.441,100.858,111.385)
C5': (15.425,103.803,111.365)
O6: (14.614,95.627,112.155)
O4': (16.884,101.990,112.039)
C8: (15.132,99.818,111.495)
C2: (18.039,96.593,111.992)
C6: (15.593,96.376,112.029)
C5: (15.606,97.771,111.809)
C4: (16.818,98.422,111.710)
P: (12.818,103.318,111.488)
C4': (16.723,103.076,111.090)
C2': (17.759,101.259,109.941)
O2': (19.115,101.640,109.869)
N1: (16.882,95.857,112.104)
N2: (19.189,95.913,112.105)
N3: (18.064,97.901,111.791)
N7: (14.557,98.660,111.664)
N9: (16.504,99.748,111.518)
O5': (14.307,102.938,111.068)
O3': (17.205,103.346,108.737)
OP2: (11.970,102.153,111.158)
C3': (16.782,102.411,109.724)
C1': (17.441,100.858,111.385)
C5': (15.425,103.803,111.365)
O6: (14.614,95.627,112.155)
O4': (16.884,101.990,112.039)
C8: (15.132,99.818,111.495)
C2: (18.039,96.593,111.992)
C6: (15.593,96.376,112.029)
C5: (15.606,97.771,111.809)
C4: (16.818,98.422,111.710)
P: (12.818,103.318,111.488)
C4': (16.723,103.076,111.090)
C2': (17.759,101.259,109.941)
O2': (19.115,101.640,109.869)
N1: (16.882,95.857,112.104)
N2: (19.189,95.913,112.105)
N3: (18.064,97.901,111.791)
N7: (14.557,98.660,111.664)
N9: (16.504,99.748,111.518)
O5': (14.307,102.938,111.068)
O3': (17.205,103.346,108.737)
OP1: (17.508,90.830,112.695)
OP2: (16.994,93.342,112.637)
C3': (21.028,92.011,110.031)
C1': (20.781,93.152,107.975)
C5': (18.636,91.053,109.987)
O4': (19.636,92.338,108.175)
C8: (19.296,95.078,108.751)
O2': (22.681,91.750,108.259)
C6: (20.769,97.992,107.442)
C5: (20.308,96.744,107.910)
C4: (21.066,95.634,107.586)
P: (17.140,92.045,111.933)
C4': (19.906,91.373,109.224)
C2': (21.865,92.678,108.946)
C2: (22.554,96.852,106.510)
N1: (21.924,98.012,106.741)
N3: (22.212,95.619,106.879)
N6: (20.123,99.143,107.641)
N7: (19.195,96.378,108.652)
N9: (20.394,94.557,108.113)
O5': (18.201,92.201,110.751)
O3': (21.768,91.023,110.739)
OP2: (16.994,93.342,112.637)
C3': (21.028,92.011,110.031)
C1': (20.781,93.152,107.975)
C5': (18.636,91.053,109.987)
O4': (19.636,92.338,108.175)
C8: (19.296,95.078,108.751)
O2': (22.681,91.750,108.259)
C6: (20.769,97.992,107.442)
C5: (20.308,96.744,107.910)
C4: (21.066,95.634,107.586)
P: (17.140,92.045,111.933)
C4': (19.906,91.373,109.224)
C2': (21.865,92.678,108.946)
C2: (22.554,96.852,106.510)
N1: (21.924,98.012,106.741)
N3: (22.212,95.619,106.879)
N6: (20.123,99.143,107.641)
N7: (19.195,96.378,108.652)
N9: (20.394,94.557,108.113)
O5': (18.201,92.201,110.751)
O3': (21.768,91.023,110.739)
Image (generated by PyMOL):