ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3R8N:A683:A702

Extra

PDB:
ATOM 1 O3' U A 682 -76.050 23.130 54.332 1.00 6.37 O
ATOM 2 P G A 683 -77.308 22.180 54.578 1.00 11.60 P
ATOM 3 OP1 G A 683 -78.059 22.715 55.746 1.00 11.60 O
ATOM 4 OP2 G A 683 -76.790 20.793 54.637 1.00 11.60 O
ATOM 5 O5' G A 683 -78.172 22.385 53.267 1.00 11.60 O
ATOM 6 C5' G A 683 -79.077 23.463 53.155 1.00 11.60 C
ATOM 7 C4' G A 683 -79.612 23.539 51.766 1.00 11.60 C
ATOM 8 O4' G A 683 -78.520 23.336 50.844 1.00 11.60 O
ATOM 9 C3' G A 683 -80.615 22.462 51.399 1.00 11.60 C
ATOM 10 O3' G A 683 -81.931 22.793 51.774 1.00 11.60 O
ATOM 11 C2' G A 683 -80.433 22.296 49.897 1.00 11.60 C
ATOM 12 O2' G A 683 -81.194 23.248 49.176 1.00 11.60 O
ATOM 13 C1' G A 683 -78.956 22.614 49.716 1.00 11.60 C
ATOM 14 N9 G A 683 -78.135 21.401 49.583 1.00 11.86 N
ATOM 15 C8 G A 683 -77.436 20.735 50.552 1.00 11.86 C
ATOM 16 N7 G A 683 -76.798 19.698 50.081 1.00 11.86 N
ATOM 17 C5 G A 683 -77.097 19.698 48.730 1.00 11.86 C
ATOM 18 C6 G A 683 -76.701 18.818 47.703 1.00 11.86 C
ATOM 19 O6 G A 683 -75.968 17.819 47.795 1.00 11.86 O
ATOM 20 N1 G A 683 -77.234 19.184 46.467 1.00 11.86 N
ATOM 21 C2 G A 683 -78.054 20.255 46.230 1.00 11.86 C
ATOM 22 N2 G A 683 -78.466 20.436 44.960 1.00 11.86 N
ATOM 23 N3 G A 683 -78.434 21.079 47.196 1.00 11.86 N
ATOM 24 C4 G A 683 -77.916 20.741 48.403 1.00 11.86 C
ATOM 25 P U A 684 -82.860 21.689 52.472 1.00 17.94 P
ATOM 26 OP1 U A 684 -83.593 22.364 53.563 1.00 17.94 O
ATOM 27 OP2 U A 684 -81.999 20.527 52.795 1.00 17.94 O
ATOM 28 O5' U A 684 -83.858 21.290 51.313 1.00 17.94 O
TER

ATOM 1 O3' G B 701 -77.204 15.642 43.967 1.00 14.29 O
ATOM 2 P A B 702 -76.059 16.657 43.512 1.00 10.65 P
ATOM 3 OP1 A B 702 -74.755 15.922 43.606 1.00 10.65 O
ATOM 4 OP2 A B 702 -76.231 17.904 44.298 1.00 10.65 O
ATOM 5 O5' A B 702 -76.426 16.896 41.989 1.00 10.65 O
ATOM 6 C5' A B 702 -76.337 15.826 41.066 1.00 10.65 C
ATOM 7 C4' A B 702 -77.380 15.941 40.006 1.00 10.65 C
ATOM 8 O4' A B 702 -78.673 15.650 40.577 1.00 10.65 O
ATOM 9 C3' A B 702 -77.528 17.321 39.414 1.00 10.65 C
ATOM 10 O3' A B 702 -76.582 17.583 38.399 1.00 10.65 O
ATOM 11 C2' A B 702 -78.982 17.348 38.948 1.00 10.65 C
ATOM 12 O2' A B 702 -79.134 16.763 37.660 1.00 10.65 O
ATOM 13 C1' A B 702 -79.662 16.450 39.978 1.00 10.65 C
ATOM 14 N9 A B 702 -80.323 17.223 41.027 1.00 10.72 N
ATOM 15 C8 A B 702 -80.050 17.217 42.361 1.00 10.72 C
ATOM 16 N7 A B 702 -80.817 18.031 43.043 1.00 10.72 N
ATOM 17 C5 A B 702 -81.662 18.597 42.088 1.00 10.72 C
ATOM 18 C6 A B 702 -82.721 19.553 42.152 1.00 10.72 C
ATOM 19 N6 A B 702 -83.154 20.165 43.276 1.00 10.72 N
ATOM 20 N1 A B 702 -83.335 19.879 40.987 1.00 10.72 N
ATOM 21 C2 A B 702 -82.912 19.290 39.864 1.00 10.72 C
ATOM 22 N3 A B 702 -81.941 18.395 39.670 1.00 10.72 N
ATOM 23 C4 A B 702 -81.357 18.088 40.838 1.00 10.72 C
ATOM 24 P G B 703 -75.816 18.989 38.373 1.00 7.42 P
ATOM 25 OP1 G B 703 -74.948 19.005 37.173 1.00 7.42 O
ATOM 26 OP2 G B 703 -75.194 19.161 39.688 1.00 7.42 O
ATOM 27 O5' G B 703 -77.009 20.029 38.201 1.00 7.42 O
TER

Atoms:
OP1: (-78.059,22.715,55.746)
OP2: (-76.790,20.793,54.637)
C3': (-80.615,22.462,51.399)
C1': (-78.956,22.614,49.716)
C5': (-79.077,23.463,53.155)
O6: (-75.968,17.819,47.795)
O4': (-78.520,23.336,50.844)
C8: (-77.436,20.735,50.552)
C2: (-78.054,20.255,46.230)
C6: (-76.701,18.818,47.703)
C5: (-77.097,19.698,48.730)
C4: (-77.916,20.741,48.403)
P: (-77.308,22.180,54.578)
C4': (-79.612,23.539,51.766)
C2': (-80.433,22.296,49.897)
O2': (-81.194,23.248,49.176)
N1: (-77.234,19.184,46.467)
N2: (-78.466,20.436,44.960)
N3: (-78.434,21.079,47.196)
N7: (-76.798,19.698,50.081)
N9: (-78.135,21.401,49.583)
O5': (-78.172,22.385,53.267)
O3': (-81.931,22.793,51.774)
OP1: (-74.755,15.922,43.606)
OP2: (-76.231,17.904,44.298)
C3': (-77.528,17.321,39.414)
C1': (-79.662,16.450,39.978)
C5': (-76.337,15.826,41.066)
O4': (-78.673,15.650,40.577)
C8: (-80.050,17.217,42.361)
O2': (-79.134,16.763,37.660)
C6: (-82.721,19.553,42.152)
C5: (-81.662,18.597,42.088)
C4: (-81.357,18.088,40.838)
P: (-76.059,16.657,43.512)
C4': (-77.380,15.941,40.006)
C2': (-78.982,17.348,38.948)
C2: (-82.912,19.290,39.864)
N1: (-83.335,19.879,40.987)
N3: (-81.941,18.395,39.670)
N6: (-83.154,20.165,43.276)
N7: (-80.817,18.031,43.043)
N9: (-80.323,17.223,41.027)
O5': (-76.426,16.896,41.989)
O3': (-76.582,17.583,38.399)
Image (generated by PyMOL):
PyMOL image
show in jmol