Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02503:02651
Extra
PDB:
ATOM 1 O3' U A2502 20.550 148.875 111.511 1.00 45.73 O
ATOM 2 P G A2503 19.589 149.117 112.780 1.00 48.04 P
ATOM 3 OP1 G A2503 18.207 148.956 112.255 1.00 46.14 O
ATOM 4 OP2 G A2503 19.971 150.373 113.483 1.00 43.75 O
ATOM 5 O5' G A2503 19.900 147.883 113.737 1.00 44.63 O
ATOM 6 C5' G A2503 19.570 146.546 113.319 1.00 45.47 C
ATOM 7 C4' G A2503 19.952 145.551 114.383 1.00 45.40 C
ATOM 8 O4' G A2503 21.388 145.581 114.589 1.00 46.74 O
ATOM 9 C3' G A2503 19.381 145.806 115.764 1.00 44.70 C
ATOM 10 O3' G A2503 18.056 145.315 115.857 1.00 43.70 O
ATOM 11 C2' G A2503 20.346 145.026 116.643 1.00 44.60 C
ATOM 12 O2' G A2503 20.102 143.635 116.554 1.00 44.97 O
ATOM 13 C1' G A2503 21.677 145.331 115.954 1.00 43.90 C
ATOM 14 N9 G A2503 22.361 146.503 116.490 1.00 42.64 N
ATOM 15 C8 G A2503 22.400 147.762 115.938 1.00 42.49 C
ATOM 16 N7 G A2503 23.105 148.606 116.640 1.00 42.13 N
ATOM 17 C5 G A2503 23.562 147.860 117.719 1.00 42.36 C
ATOM 18 C6 G A2503 24.390 148.230 118.804 1.00 40.79 C
ATOM 19 O6 G A2503 24.927 149.315 119.026 1.00 43.39 O
ATOM 20 N1 G A2503 24.593 147.175 119.676 1.00 40.66 N
ATOM 21 C2 G A2503 24.089 145.915 119.522 1.00 42.53 C
ATOM 22 N2 G A2503 24.417 145.029 120.482 1.00 40.94 N
ATOM 23 N3 G A2503 23.326 145.546 118.506 1.00 43.48 N
ATOM 24 C4 G A2503 23.104 146.564 117.648 1.00 42.82 C
ATOM 25 P U A2504 17.006 146.044 116.829 1.00 43.62 P
ATOM 26 OP1 U A2504 15.740 145.256 116.759 1.00 42.33 O
ATOM 27 OP2 U A2504 16.992 147.488 116.490 1.00 43.03 O
ATOM 28 O5' U A2504 17.643 145.874 118.283 1.00 43.94 O
TER
ATOM 1 O3' A B2650 26.549 147.436 124.211 1.00 46.57 O
ATOM 2 P A B2651 27.053 147.372 122.685 1.00 45.60 P
ATOM 3 OP1 A B2651 28.084 148.419 122.474 1.00 44.56 O
ATOM 4 OP2 A B2651 25.852 147.348 121.832 1.00 47.32 O
ATOM 5 O5' A B2651 27.714 145.928 122.580 1.00 45.20 O
ATOM 6 C5' A B2651 27.251 144.864 123.430 1.00 46.41 C
ATOM 7 C4' A B2651 27.654 143.517 122.882 1.00 46.42 C
ATOM 8 O4' A B2651 26.921 143.239 121.666 1.00 45.90 O
ATOM 9 C3' A B2651 29.127 143.322 122.558 1.00 47.01 C
ATOM 10 O3' A B2651 29.501 142.009 122.879 1.00 49.93 O
ATOM 11 C2' A B2651 29.192 143.524 121.056 1.00 46.15 C
ATOM 12 O2' A B2651 30.223 142.762 120.459 1.00 44.10 O
ATOM 13 C1' A B2651 27.825 143.016 120.606 1.00 45.31 C
ATOM 14 N9 A B2651 27.351 143.773 119.450 1.00 44.92 N
ATOM 15 C8 A B2651 27.593 145.089 119.109 1.00 43.14 C
ATOM 16 N7 A B2651 27.062 145.442 117.970 1.00 38.62 N
ATOM 17 C5 A B2651 26.425 144.295 117.537 1.00 40.12 C
ATOM 18 C6 A B2651 25.704 144.015 116.395 1.00 41.95 C
ATOM 19 N6 A B2651 25.522 144.886 115.417 1.00 42.82 N
ATOM 20 N1 A B2651 25.174 142.783 116.275 1.00 46.21 N
ATOM 21 C2 A B2651 25.389 141.893 117.256 1.00 46.44 C
ATOM 22 N3 A B2651 26.074 142.034 118.376 1.00 42.36 N
ATOM 23 C4 A B2651 26.572 143.271 118.453 1.00 41.61 C
ATOM 24 P A B2652 30.203 141.731 124.284 1.00 52.34 P
ATOM 25 OP1 A B2652 30.235 143.009 125.046 1.00 52.35 O
ATOM 26 OP2 A B2652 31.475 141.010 123.994 1.00 54.52 O
ATOM 27 O5' A B2652 29.186 140.750 125.014 1.00 48.44 O
TER
ATOM 2 P G A2503 19.589 149.117 112.780 1.00 48.04 P
ATOM 3 OP1 G A2503 18.207 148.956 112.255 1.00 46.14 O
ATOM 4 OP2 G A2503 19.971 150.373 113.483 1.00 43.75 O
ATOM 5 O5' G A2503 19.900 147.883 113.737 1.00 44.63 O
ATOM 6 C5' G A2503 19.570 146.546 113.319 1.00 45.47 C
ATOM 7 C4' G A2503 19.952 145.551 114.383 1.00 45.40 C
ATOM 8 O4' G A2503 21.388 145.581 114.589 1.00 46.74 O
ATOM 9 C3' G A2503 19.381 145.806 115.764 1.00 44.70 C
ATOM 10 O3' G A2503 18.056 145.315 115.857 1.00 43.70 O
ATOM 11 C2' G A2503 20.346 145.026 116.643 1.00 44.60 C
ATOM 12 O2' G A2503 20.102 143.635 116.554 1.00 44.97 O
ATOM 13 C1' G A2503 21.677 145.331 115.954 1.00 43.90 C
ATOM 14 N9 G A2503 22.361 146.503 116.490 1.00 42.64 N
ATOM 15 C8 G A2503 22.400 147.762 115.938 1.00 42.49 C
ATOM 16 N7 G A2503 23.105 148.606 116.640 1.00 42.13 N
ATOM 17 C5 G A2503 23.562 147.860 117.719 1.00 42.36 C
ATOM 18 C6 G A2503 24.390 148.230 118.804 1.00 40.79 C
ATOM 19 O6 G A2503 24.927 149.315 119.026 1.00 43.39 O
ATOM 20 N1 G A2503 24.593 147.175 119.676 1.00 40.66 N
ATOM 21 C2 G A2503 24.089 145.915 119.522 1.00 42.53 C
ATOM 22 N2 G A2503 24.417 145.029 120.482 1.00 40.94 N
ATOM 23 N3 G A2503 23.326 145.546 118.506 1.00 43.48 N
ATOM 24 C4 G A2503 23.104 146.564 117.648 1.00 42.82 C
ATOM 25 P U A2504 17.006 146.044 116.829 1.00 43.62 P
ATOM 26 OP1 U A2504 15.740 145.256 116.759 1.00 42.33 O
ATOM 27 OP2 U A2504 16.992 147.488 116.490 1.00 43.03 O
ATOM 28 O5' U A2504 17.643 145.874 118.283 1.00 43.94 O
TER
ATOM 1 O3' A B2650 26.549 147.436 124.211 1.00 46.57 O
ATOM 2 P A B2651 27.053 147.372 122.685 1.00 45.60 P
ATOM 3 OP1 A B2651 28.084 148.419 122.474 1.00 44.56 O
ATOM 4 OP2 A B2651 25.852 147.348 121.832 1.00 47.32 O
ATOM 5 O5' A B2651 27.714 145.928 122.580 1.00 45.20 O
ATOM 6 C5' A B2651 27.251 144.864 123.430 1.00 46.41 C
ATOM 7 C4' A B2651 27.654 143.517 122.882 1.00 46.42 C
ATOM 8 O4' A B2651 26.921 143.239 121.666 1.00 45.90 O
ATOM 9 C3' A B2651 29.127 143.322 122.558 1.00 47.01 C
ATOM 10 O3' A B2651 29.501 142.009 122.879 1.00 49.93 O
ATOM 11 C2' A B2651 29.192 143.524 121.056 1.00 46.15 C
ATOM 12 O2' A B2651 30.223 142.762 120.459 1.00 44.10 O
ATOM 13 C1' A B2651 27.825 143.016 120.606 1.00 45.31 C
ATOM 14 N9 A B2651 27.351 143.773 119.450 1.00 44.92 N
ATOM 15 C8 A B2651 27.593 145.089 119.109 1.00 43.14 C
ATOM 16 N7 A B2651 27.062 145.442 117.970 1.00 38.62 N
ATOM 17 C5 A B2651 26.425 144.295 117.537 1.00 40.12 C
ATOM 18 C6 A B2651 25.704 144.015 116.395 1.00 41.95 C
ATOM 19 N6 A B2651 25.522 144.886 115.417 1.00 42.82 N
ATOM 20 N1 A B2651 25.174 142.783 116.275 1.00 46.21 N
ATOM 21 C2 A B2651 25.389 141.893 117.256 1.00 46.44 C
ATOM 22 N3 A B2651 26.074 142.034 118.376 1.00 42.36 N
ATOM 23 C4 A B2651 26.572 143.271 118.453 1.00 41.61 C
ATOM 24 P A B2652 30.203 141.731 124.284 1.00 52.34 P
ATOM 25 OP1 A B2652 30.235 143.009 125.046 1.00 52.35 O
ATOM 26 OP2 A B2652 31.475 141.010 123.994 1.00 54.52 O
ATOM 27 O5' A B2652 29.186 140.750 125.014 1.00 48.44 O
TER
Atoms:
OP1: (18.207,148.956,112.255)
OP2: (19.971,150.373,113.483)
C3': (19.381,145.806,115.764)
C1': (21.677,145.331,115.954)
C5': (19.570,146.546,113.319)
O6: (24.927,149.315,119.026)
O4': (21.388,145.581,114.589)
C8: (22.400,147.762,115.938)
C2: (24.089,145.915,119.522)
C6: (24.390,148.230,118.804)
C5: (23.562,147.860,117.719)
C4: (23.104,146.564,117.648)
P: (19.589,149.117,112.780)
C4': (19.952,145.551,114.383)
C2': (20.346,145.026,116.643)
O2': (20.102,143.635,116.554)
N1: (24.593,147.175,119.676)
N2: (24.417,145.029,120.482)
N3: (23.326,145.546,118.506)
N7: (23.105,148.606,116.640)
N9: (22.361,146.503,116.490)
O5': (19.900,147.883,113.737)
O3': (18.056,145.315,115.857)
OP2: (19.971,150.373,113.483)
C3': (19.381,145.806,115.764)
C1': (21.677,145.331,115.954)
C5': (19.570,146.546,113.319)
O6: (24.927,149.315,119.026)
O4': (21.388,145.581,114.589)
C8: (22.400,147.762,115.938)
C2: (24.089,145.915,119.522)
C6: (24.390,148.230,118.804)
C5: (23.562,147.860,117.719)
C4: (23.104,146.564,117.648)
P: (19.589,149.117,112.780)
C4': (19.952,145.551,114.383)
C2': (20.346,145.026,116.643)
O2': (20.102,143.635,116.554)
N1: (24.593,147.175,119.676)
N2: (24.417,145.029,120.482)
N3: (23.326,145.546,118.506)
N7: (23.105,148.606,116.640)
N9: (22.361,146.503,116.490)
O5': (19.900,147.883,113.737)
O3': (18.056,145.315,115.857)
OP1: (28.084,148.419,122.474)
OP2: (25.852,147.348,121.832)
C3': (29.127,143.322,122.558)
C1': (27.825,143.016,120.606)
C5': (27.251,144.864,123.430)
O4': (26.921,143.239,121.666)
C8: (27.593,145.089,119.109)
O2': (30.223,142.762,120.459)
C6: (25.704,144.015,116.395)
C5: (26.425,144.295,117.537)
C4: (26.572,143.271,118.453)
P: (27.053,147.372,122.685)
C4': (27.654,143.517,122.882)
C2': (29.192,143.524,121.056)
C2: (25.389,141.893,117.256)
N1: (25.174,142.783,116.275)
N3: (26.074,142.034,118.376)
N6: (25.522,144.886,115.417)
N7: (27.062,145.442,117.970)
N9: (27.351,143.773,119.450)
O5': (27.714,145.928,122.580)
O3': (29.501,142.009,122.879)
OP2: (25.852,147.348,121.832)
C3': (29.127,143.322,122.558)
C1': (27.825,143.016,120.606)
C5': (27.251,144.864,123.430)
O4': (26.921,143.239,121.666)
C8: (27.593,145.089,119.109)
O2': (30.223,142.762,120.459)
C6: (25.704,144.015,116.395)
C5: (26.425,144.295,117.537)
C4: (26.572,143.271,118.453)
P: (27.053,147.372,122.685)
C4': (27.654,143.517,122.882)
C2': (29.192,143.524,121.056)
C2: (25.389,141.893,117.256)
N1: (25.174,142.783,116.275)
N3: (26.074,142.034,118.376)
N6: (25.522,144.886,115.417)
N7: (27.062,145.442,117.970)
N9: (27.351,143.773,119.450)
O5': (27.714,145.928,122.580)
O3': (29.501,142.009,122.879)
Image (generated by PyMOL):