Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01379:01377
Extra
PDB:
ATOM 1 O3' U A1378 63.249 170.650 65.724 1.00 37.25 O
ATOM 2 P C A1379 63.017 172.186 65.318 1.00 38.82 P
ATOM 3 OP1 C A1379 62.959 172.953 66.588 1.00 38.05 O
ATOM 4 OP2 C A1379 61.895 172.290 64.356 1.00 36.60 O
ATOM 5 O5' C A1379 64.359 172.559 64.545 1.00 39.91 O
ATOM 6 C5' C A1379 65.600 172.785 65.258 1.00 41.22 C
ATOM 7 C4' C A1379 66.399 173.846 64.548 1.00 42.36 C
ATOM 8 O4' C A1379 66.828 173.344 63.259 1.00 42.38 O
ATOM 9 C3' C A1379 65.589 175.099 64.254 1.00 42.01 C
ATOM 10 O3' C A1379 65.705 176.016 65.334 1.00 41.72 O
ATOM 11 C2' C A1379 66.201 175.610 62.962 1.00 42.60 C
ATOM 12 O2' C A1379 67.396 176.326 63.190 1.00 42.63 O
ATOM 13 C1' C A1379 66.536 174.295 62.251 1.00 43.59 C
ATOM 14 N1 C A1379 65.491 173.722 61.366 1.00 45.40 N
ATOM 15 C2 C A1379 65.006 174.475 60.277 1.00 45.90 C
ATOM 16 O2 C A1379 65.411 175.632 60.109 1.00 48.70 O
ATOM 17 N3 C A1379 64.106 173.916 59.438 1.00 46.53 N
ATOM 18 C4 C A1379 63.679 172.668 59.651 1.00 47.16 C
ATOM 19 N4 C A1379 62.813 172.144 58.778 1.00 45.87 N
ATOM 20 C5 C A1379 64.125 171.896 60.764 1.00 45.52 C
ATOM 21 C6 C A1379 65.017 172.455 61.587 1.00 44.95 C
ATOM 22 P C A1380 64.405 176.769 65.887 1.00 40.86 P
ATOM 23 OP1 C A1380 64.854 177.537 67.073 1.00 41.19 O
ATOM 24 OP2 C A1380 63.290 175.800 66.019 1.00 42.21 O
ATOM 25 O5' C A1380 64.026 177.775 64.717 1.00 40.37 O
TER
ATOM 1 O3' G B1376 65.188 163.739 58.869 1.00 33.38 O
ATOM 2 P U B1377 63.594 163.713 58.774 1.00 34.16 P
ATOM 3 OP1 U B1377 63.041 162.853 59.848 1.00 35.99 O
ATOM 4 OP2 U B1377 63.232 163.444 57.366 1.00 36.09 O
ATOM 5 O5' U B1377 63.222 165.204 59.148 1.00 34.23 O
ATOM 6 C5' U B1377 63.529 165.722 60.453 1.00 32.85 C
ATOM 7 C4' U B1377 63.592 167.220 60.400 1.00 31.31 C
ATOM 8 O4' U B1377 64.919 167.656 59.985 1.00 31.03 O
ATOM 9 C3' U B1377 62.606 167.833 59.415 1.00 29.52 C
ATOM 10 O3' U B1377 62.087 169.024 59.968 1.00 29.44 O
ATOM 11 C2' U B1377 63.482 168.080 58.187 1.00 29.70 C
ATOM 12 O2' U B1377 63.009 169.109 57.347 1.00 29.16 O
ATOM 13 C1' U B1377 64.802 168.473 58.841 1.00 29.59 C
ATOM 14 N1 U B1377 66.005 168.307 58.015 1.00 30.10 N
ATOM 15 C2 U B1377 66.600 169.458 57.534 1.00 31.23 C
ATOM 16 O2 U B1377 66.126 170.559 57.708 1.00 33.35 O
ATOM 17 N3 U B1377 67.764 169.270 56.829 1.00 29.98 N
ATOM 18 C4 U B1377 68.368 168.065 56.535 1.00 30.42 C
ATOM 19 O4 U B1377 69.432 168.058 55.916 1.00 27.23 O
ATOM 20 C5 U B1377 67.673 166.910 57.033 1.00 30.48 C
ATOM 21 C6 U B1377 66.543 167.068 57.742 1.00 31.09 C
ATOM 22 P U B1378 60.763 168.953 60.862 1.00 35.08 P
ATOM 23 OP1 U B1378 59.962 167.779 60.405 1.00 41.75 O
ATOM 24 OP2 U B1378 60.132 170.294 60.902 1.00 36.31 O
ATOM 25 O5' U B1378 61.287 168.579 62.315 1.00 35.23 O
TER
ATOM 2 P C A1379 63.017 172.186 65.318 1.00 38.82 P
ATOM 3 OP1 C A1379 62.959 172.953 66.588 1.00 38.05 O
ATOM 4 OP2 C A1379 61.895 172.290 64.356 1.00 36.60 O
ATOM 5 O5' C A1379 64.359 172.559 64.545 1.00 39.91 O
ATOM 6 C5' C A1379 65.600 172.785 65.258 1.00 41.22 C
ATOM 7 C4' C A1379 66.399 173.846 64.548 1.00 42.36 C
ATOM 8 O4' C A1379 66.828 173.344 63.259 1.00 42.38 O
ATOM 9 C3' C A1379 65.589 175.099 64.254 1.00 42.01 C
ATOM 10 O3' C A1379 65.705 176.016 65.334 1.00 41.72 O
ATOM 11 C2' C A1379 66.201 175.610 62.962 1.00 42.60 C
ATOM 12 O2' C A1379 67.396 176.326 63.190 1.00 42.63 O
ATOM 13 C1' C A1379 66.536 174.295 62.251 1.00 43.59 C
ATOM 14 N1 C A1379 65.491 173.722 61.366 1.00 45.40 N
ATOM 15 C2 C A1379 65.006 174.475 60.277 1.00 45.90 C
ATOM 16 O2 C A1379 65.411 175.632 60.109 1.00 48.70 O
ATOM 17 N3 C A1379 64.106 173.916 59.438 1.00 46.53 N
ATOM 18 C4 C A1379 63.679 172.668 59.651 1.00 47.16 C
ATOM 19 N4 C A1379 62.813 172.144 58.778 1.00 45.87 N
ATOM 20 C5 C A1379 64.125 171.896 60.764 1.00 45.52 C
ATOM 21 C6 C A1379 65.017 172.455 61.587 1.00 44.95 C
ATOM 22 P C A1380 64.405 176.769 65.887 1.00 40.86 P
ATOM 23 OP1 C A1380 64.854 177.537 67.073 1.00 41.19 O
ATOM 24 OP2 C A1380 63.290 175.800 66.019 1.00 42.21 O
ATOM 25 O5' C A1380 64.026 177.775 64.717 1.00 40.37 O
TER
ATOM 1 O3' G B1376 65.188 163.739 58.869 1.00 33.38 O
ATOM 2 P U B1377 63.594 163.713 58.774 1.00 34.16 P
ATOM 3 OP1 U B1377 63.041 162.853 59.848 1.00 35.99 O
ATOM 4 OP2 U B1377 63.232 163.444 57.366 1.00 36.09 O
ATOM 5 O5' U B1377 63.222 165.204 59.148 1.00 34.23 O
ATOM 6 C5' U B1377 63.529 165.722 60.453 1.00 32.85 C
ATOM 7 C4' U B1377 63.592 167.220 60.400 1.00 31.31 C
ATOM 8 O4' U B1377 64.919 167.656 59.985 1.00 31.03 O
ATOM 9 C3' U B1377 62.606 167.833 59.415 1.00 29.52 C
ATOM 10 O3' U B1377 62.087 169.024 59.968 1.00 29.44 O
ATOM 11 C2' U B1377 63.482 168.080 58.187 1.00 29.70 C
ATOM 12 O2' U B1377 63.009 169.109 57.347 1.00 29.16 O
ATOM 13 C1' U B1377 64.802 168.473 58.841 1.00 29.59 C
ATOM 14 N1 U B1377 66.005 168.307 58.015 1.00 30.10 N
ATOM 15 C2 U B1377 66.600 169.458 57.534 1.00 31.23 C
ATOM 16 O2 U B1377 66.126 170.559 57.708 1.00 33.35 O
ATOM 17 N3 U B1377 67.764 169.270 56.829 1.00 29.98 N
ATOM 18 C4 U B1377 68.368 168.065 56.535 1.00 30.42 C
ATOM 19 O4 U B1377 69.432 168.058 55.916 1.00 27.23 O
ATOM 20 C5 U B1377 67.673 166.910 57.033 1.00 30.48 C
ATOM 21 C6 U B1377 66.543 167.068 57.742 1.00 31.09 C
ATOM 22 P U B1378 60.763 168.953 60.862 1.00 35.08 P
ATOM 23 OP1 U B1378 59.962 167.779 60.405 1.00 41.75 O
ATOM 24 OP2 U B1378 60.132 170.294 60.902 1.00 36.31 O
ATOM 25 O5' U B1378 61.287 168.579 62.315 1.00 35.23 O
TER
Atoms:
C2: (65.006,174.475,60.277)
OP1: (62.959,172.953,66.588)
OP2: (61.895,172.290,64.356)
C4: (63.679,172.668,59.651)
O5': (64.359,172.559,64.545)
C3': (65.589,175.099,64.254)
C1': (66.536,174.295,62.251)
O4': (66.828,173.344,63.259)
C5': (65.600,172.785,65.258)
P: (63.017,172.186,65.318)
O2: (65.411,175.632,60.109)
C4': (66.399,173.846,64.548)
C2': (66.201,175.610,62.962)
O2': (67.396,176.326,63.190)
N1: (65.491,173.722,61.366)
N3: (64.106,173.916,59.438)
N4: (62.813,172.144,58.778)
C6: (65.017,172.455,61.587)
C5: (64.125,171.896,60.764)
O3': (65.705,176.016,65.334)
OP1: (62.959,172.953,66.588)
OP2: (61.895,172.290,64.356)
C4: (63.679,172.668,59.651)
O5': (64.359,172.559,64.545)
C3': (65.589,175.099,64.254)
C1': (66.536,174.295,62.251)
O4': (66.828,173.344,63.259)
C5': (65.600,172.785,65.258)
P: (63.017,172.186,65.318)
O2: (65.411,175.632,60.109)
C4': (66.399,173.846,64.548)
C2': (66.201,175.610,62.962)
O2': (67.396,176.326,63.190)
N1: (65.491,173.722,61.366)
N3: (64.106,173.916,59.438)
N4: (62.813,172.144,58.778)
C6: (65.017,172.455,61.587)
C5: (64.125,171.896,60.764)
O3': (65.705,176.016,65.334)
C4: (68.368,168.065,56.535)
N3: (67.764,169.270,56.829)
OP1: (63.041,162.853,59.848)
OP2: (63.232,163.444,57.366)
C2: (66.600,169.458,57.534)
C1': (64.802,168.473,58.841)
C3': (62.606,167.833,59.415)
O5': (63.222,165.204,59.148)
O4': (64.919,167.656,59.985)
C5': (63.529,165.722,60.453)
P: (63.594,163.713,58.774)
C4': (63.592,167.220,60.400)
C2': (63.482,168.080,58.187)
O2': (63.009,169.109,57.347)
N1: (66.005,168.307,58.015)
O4: (69.432,168.058,55.916)
O2: (66.126,170.559,57.708)
C6: (66.543,167.068,57.742)
C5: (67.673,166.910,57.033)
O3': (62.087,169.024,59.968)
N3: (67.764,169.270,56.829)
OP1: (63.041,162.853,59.848)
OP2: (63.232,163.444,57.366)
C2: (66.600,169.458,57.534)
C1': (64.802,168.473,58.841)
C3': (62.606,167.833,59.415)
O5': (63.222,165.204,59.148)
O4': (64.919,167.656,59.985)
C5': (63.529,165.722,60.453)
P: (63.594,163.713,58.774)
C4': (63.592,167.220,60.400)
C2': (63.482,168.080,58.187)
O2': (63.009,169.109,57.347)
N1: (66.005,168.307,58.015)
O4: (69.432,168.058,55.916)
O2: (66.126,170.559,57.708)
C6: (66.543,167.068,57.742)
C5: (67.673,166.910,57.033)
O3': (62.087,169.024,59.968)
Image (generated by PyMOL):