Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02377:02325
Extra
PDB:
ATOM 1 O3' U A2376 55.897 116.833 94.193 1.00 38.75 O
ATOM 2 P C A2377 56.305 116.192 92.771 1.00 38.61 P
ATOM 3 OP1 C A2377 55.647 117.053 91.756 1.00 39.13 O
ATOM 4 OP2 C A2377 56.033 114.735 92.783 1.00 37.13 O
ATOM 5 O5' C A2377 57.885 116.377 92.659 1.00 36.66 O
ATOM 6 C5' C A2377 58.491 117.687 92.592 1.00 33.47 C
ATOM 7 C4' C A2377 59.938 117.567 92.176 1.00 34.03 C
ATOM 8 O4' C A2377 60.524 116.446 92.858 1.00 35.24 O
ATOM 9 C3' C A2377 60.195 117.217 90.714 1.00 34.86 C
ATOM 10 O3' C A2377 60.399 118.424 89.984 1.00 37.80 O
ATOM 11 C2' C A2377 61.503 116.405 90.734 1.00 34.16 C
ATOM 12 O2' C A2377 62.589 117.104 90.160 1.00 34.53 O
ATOM 13 C1' C A2377 61.747 116.182 92.231 1.00 33.16 C
ATOM 14 N1 C A2377 62.215 114.839 92.625 1.00 31.59 N
ATOM 15 C2 C A2377 63.373 114.741 93.405 1.00 29.49 C
ATOM 16 O2 C A2377 63.944 115.775 93.763 1.00 28.30 O
ATOM 17 N3 C A2377 63.839 113.525 93.747 1.00 30.18 N
ATOM 18 C4 C A2377 63.202 112.429 93.342 1.00 31.53 C
ATOM 19 N4 C A2377 63.727 111.251 93.673 1.00 31.86 N
ATOM 20 C5 C A2377 62.005 112.494 92.568 1.00 31.91 C
ATOM 21 C6 C A2377 61.551 113.708 92.235 1.00 31.19 C
ATOM 22 P G A2378 59.428 118.808 88.766 1.00 36.54 P
ATOM 23 OP1 G A2378 58.199 117.980 88.885 1.00 37.30 O
ATOM 24 OP2 G A2378 60.204 118.788 87.502 1.00 37.05 O
ATOM 25 O5' G A2378 59.046 120.314 89.099 1.00 37.50 O
TER
ATOM 1 O3' A B2324 60.151 103.781 92.181 1.00 38.21 O
ATOM 2 P U B2325 60.621 103.589 93.711 1.00 40.11 P
ATOM 3 OP1 U B2325 60.522 102.139 94.011 1.00 41.52 O
ATOM 4 OP2 U B2325 59.890 104.565 94.563 1.00 40.37 O
ATOM 5 O5' U B2325 62.160 103.993 93.708 1.00 39.08 O
ATOM 6 C5' U B2325 63.028 103.624 94.792 1.00 37.36 C
ATOM 7 C4' U B2325 64.033 104.720 95.041 1.00 38.54 C
ATOM 8 O4' U B2325 64.799 104.952 93.823 1.00 38.66 O
ATOM 9 C3' U B2325 63.417 106.064 95.405 1.00 38.93 C
ATOM 10 O3' U B2325 64.315 106.770 96.256 1.00 39.20 O
ATOM 11 C2' U B2325 63.306 106.748 94.048 1.00 38.30 C
ATOM 12 O2' U B2325 63.239 108.157 94.127 1.00 38.81 O
ATOM 13 C1' U B2325 64.594 106.279 93.376 1.00 38.44 C
ATOM 14 N1 U B2325 64.528 106.281 91.906 1.00 38.82 N
ATOM 15 C2 U B2325 65.144 107.328 91.225 1.00 39.40 C
ATOM 16 O2 U B2325 65.776 108.211 91.782 1.00 38.55 O
ATOM 17 N3 U B2325 64.999 107.297 89.862 1.00 40.08 N
ATOM 18 C4 U B2325 64.336 106.346 89.117 1.00 40.97 C
ATOM 19 O4 U B2325 64.263 106.479 87.896 1.00 41.75 O
ATOM 20 C5 U B2325 63.753 105.286 89.883 1.00 41.36 C
ATOM 21 C6 U B2325 63.864 105.289 91.217 1.00 39.39 C
ATOM 22 P A B2326 64.064 106.783 97.841 1.00 40.39 P
ATOM 23 OP1 A B2326 63.858 105.369 98.261 1.00 38.92 O
ATOM 24 OP2 A B2326 63.032 107.795 98.160 1.00 40.49 O
ATOM 25 O5' A B2326 65.453 107.298 98.426 1.00 40.28 O
TER
ATOM 2 P C A2377 56.305 116.192 92.771 1.00 38.61 P
ATOM 3 OP1 C A2377 55.647 117.053 91.756 1.00 39.13 O
ATOM 4 OP2 C A2377 56.033 114.735 92.783 1.00 37.13 O
ATOM 5 O5' C A2377 57.885 116.377 92.659 1.00 36.66 O
ATOM 6 C5' C A2377 58.491 117.687 92.592 1.00 33.47 C
ATOM 7 C4' C A2377 59.938 117.567 92.176 1.00 34.03 C
ATOM 8 O4' C A2377 60.524 116.446 92.858 1.00 35.24 O
ATOM 9 C3' C A2377 60.195 117.217 90.714 1.00 34.86 C
ATOM 10 O3' C A2377 60.399 118.424 89.984 1.00 37.80 O
ATOM 11 C2' C A2377 61.503 116.405 90.734 1.00 34.16 C
ATOM 12 O2' C A2377 62.589 117.104 90.160 1.00 34.53 O
ATOM 13 C1' C A2377 61.747 116.182 92.231 1.00 33.16 C
ATOM 14 N1 C A2377 62.215 114.839 92.625 1.00 31.59 N
ATOM 15 C2 C A2377 63.373 114.741 93.405 1.00 29.49 C
ATOM 16 O2 C A2377 63.944 115.775 93.763 1.00 28.30 O
ATOM 17 N3 C A2377 63.839 113.525 93.747 1.00 30.18 N
ATOM 18 C4 C A2377 63.202 112.429 93.342 1.00 31.53 C
ATOM 19 N4 C A2377 63.727 111.251 93.673 1.00 31.86 N
ATOM 20 C5 C A2377 62.005 112.494 92.568 1.00 31.91 C
ATOM 21 C6 C A2377 61.551 113.708 92.235 1.00 31.19 C
ATOM 22 P G A2378 59.428 118.808 88.766 1.00 36.54 P
ATOM 23 OP1 G A2378 58.199 117.980 88.885 1.00 37.30 O
ATOM 24 OP2 G A2378 60.204 118.788 87.502 1.00 37.05 O
ATOM 25 O5' G A2378 59.046 120.314 89.099 1.00 37.50 O
TER
ATOM 1 O3' A B2324 60.151 103.781 92.181 1.00 38.21 O
ATOM 2 P U B2325 60.621 103.589 93.711 1.00 40.11 P
ATOM 3 OP1 U B2325 60.522 102.139 94.011 1.00 41.52 O
ATOM 4 OP2 U B2325 59.890 104.565 94.563 1.00 40.37 O
ATOM 5 O5' U B2325 62.160 103.993 93.708 1.00 39.08 O
ATOM 6 C5' U B2325 63.028 103.624 94.792 1.00 37.36 C
ATOM 7 C4' U B2325 64.033 104.720 95.041 1.00 38.54 C
ATOM 8 O4' U B2325 64.799 104.952 93.823 1.00 38.66 O
ATOM 9 C3' U B2325 63.417 106.064 95.405 1.00 38.93 C
ATOM 10 O3' U B2325 64.315 106.770 96.256 1.00 39.20 O
ATOM 11 C2' U B2325 63.306 106.748 94.048 1.00 38.30 C
ATOM 12 O2' U B2325 63.239 108.157 94.127 1.00 38.81 O
ATOM 13 C1' U B2325 64.594 106.279 93.376 1.00 38.44 C
ATOM 14 N1 U B2325 64.528 106.281 91.906 1.00 38.82 N
ATOM 15 C2 U B2325 65.144 107.328 91.225 1.00 39.40 C
ATOM 16 O2 U B2325 65.776 108.211 91.782 1.00 38.55 O
ATOM 17 N3 U B2325 64.999 107.297 89.862 1.00 40.08 N
ATOM 18 C4 U B2325 64.336 106.346 89.117 1.00 40.97 C
ATOM 19 O4 U B2325 64.263 106.479 87.896 1.00 41.75 O
ATOM 20 C5 U B2325 63.753 105.286 89.883 1.00 41.36 C
ATOM 21 C6 U B2325 63.864 105.289 91.217 1.00 39.39 C
ATOM 22 P A B2326 64.064 106.783 97.841 1.00 40.39 P
ATOM 23 OP1 A B2326 63.858 105.369 98.261 1.00 38.92 O
ATOM 24 OP2 A B2326 63.032 107.795 98.160 1.00 40.49 O
ATOM 25 O5' A B2326 65.453 107.298 98.426 1.00 40.28 O
TER
Atoms:
C2: (63.373,114.741,93.405)
OP1: (55.647,117.053,91.756)
OP2: (56.033,114.735,92.783)
C4: (63.202,112.429,93.342)
O5': (57.885,116.377,92.659)
C3': (60.195,117.217,90.714)
C1': (61.747,116.182,92.231)
O4': (60.524,116.446,92.858)
C5': (58.491,117.687,92.592)
P: (56.305,116.192,92.771)
O2: (63.944,115.775,93.763)
C4': (59.938,117.567,92.176)
C2': (61.503,116.405,90.734)
O2': (62.589,117.104,90.160)
N1: (62.215,114.839,92.625)
N3: (63.839,113.525,93.747)
N4: (63.727,111.251,93.673)
C6: (61.551,113.708,92.235)
C5: (62.005,112.494,92.568)
O3': (60.399,118.424,89.984)
OP1: (55.647,117.053,91.756)
OP2: (56.033,114.735,92.783)
C4: (63.202,112.429,93.342)
O5': (57.885,116.377,92.659)
C3': (60.195,117.217,90.714)
C1': (61.747,116.182,92.231)
O4': (60.524,116.446,92.858)
C5': (58.491,117.687,92.592)
P: (56.305,116.192,92.771)
O2: (63.944,115.775,93.763)
C4': (59.938,117.567,92.176)
C2': (61.503,116.405,90.734)
O2': (62.589,117.104,90.160)
N1: (62.215,114.839,92.625)
N3: (63.839,113.525,93.747)
N4: (63.727,111.251,93.673)
C6: (61.551,113.708,92.235)
C5: (62.005,112.494,92.568)
O3': (60.399,118.424,89.984)
C4: (64.336,106.346,89.117)
N3: (64.999,107.297,89.862)
OP1: (60.522,102.139,94.011)
OP2: (59.890,104.565,94.563)
C2: (65.144,107.328,91.225)
C1': (64.594,106.279,93.376)
C3': (63.417,106.064,95.405)
O5': (62.160,103.993,93.708)
O4': (64.799,104.952,93.823)
C5': (63.028,103.624,94.792)
P: (60.621,103.589,93.711)
C4': (64.033,104.720,95.041)
C2': (63.306,106.748,94.048)
O2': (63.239,108.157,94.127)
N1: (64.528,106.281,91.906)
O4: (64.263,106.479,87.896)
O2: (65.776,108.211,91.782)
C6: (63.864,105.289,91.217)
C5: (63.753,105.286,89.883)
O3': (64.315,106.770,96.256)
N3: (64.999,107.297,89.862)
OP1: (60.522,102.139,94.011)
OP2: (59.890,104.565,94.563)
C2: (65.144,107.328,91.225)
C1': (64.594,106.279,93.376)
C3': (63.417,106.064,95.405)
O5': (62.160,103.993,93.708)
O4': (64.799,104.952,93.823)
C5': (63.028,103.624,94.792)
P: (60.621,103.589,93.711)
C4': (64.033,104.720,95.041)
C2': (63.306,106.748,94.048)
O2': (63.239,108.157,94.127)
N1: (64.528,106.281,91.906)
O4: (64.263,106.479,87.896)
O2: (65.776,108.211,91.782)
C6: (63.864,105.289,91.217)
C5: (63.753,105.286,89.883)
O3': (64.315,106.770,96.256)
Image (generated by PyMOL):